Larimichthys crocea (large yellow croaker): 104933849
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Entry
104933849 CDS
T04659
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X2
KO
K20163
DENN domain-containing protein 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104933849 (dennd4b)
Membrane trafficking [BR:
lco04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104933849 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
SPA
DUF2464
Motif
Other DBs
NCBI-GeneID:
104933849
NCBI-ProteinID:
XP_010747678
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MSSGGQTDGMTEEKCPQLVDYFVVAGLDPAGPWRPLDEDGRTSANSSSTPSSSSSSGRAV
ESVTDLAVIARGLGEEVPEGFTCIERTLGGHSAELSAGLINNPHLYLCYRRGRDKPPILD
LGVLYEGKEQLKQGWYVIETTPYSRSASLSAGGAPTAHRVFLTYRRALDSQGLHTLGVTD
IALLLPSKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYKANLISRYPEED
LEAFPLPESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFS
RELLSERQSVRLGLLSVVDRRPITNRSLQVKKSICVLSHWPFFNVFQKFLTFVYRYSISG
PHVLPLEKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQN
LGPENACTLLLAVLTEHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADV
LLAPMPFIVGVHSSYFDLYDPPTDVVCVDLDTNTIFQSEDKKPLSWRSLPRKHGKTLFNT
LTNLHKTLEKICTPGQEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFMSCLLRGYRTF
LLPITQAPSDTTTDCSSLFNLQGFLKSRDRTQQKFYSQLTRTQMFTQFIEECSFVSDRHA
CLEFFDECVQKVDVEKPEEVRLIDLDETHSGEHTVFIMPPEEPQEPDGSECPALYSYETF
PTLRLELFDRPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYSAVADMWSKCLLGH
CYGLWFIYLPTFVKAESAKVRALHTAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPV
LAVRVLLEMKKAGITPNTITYGYYNKAVLESKWPSTSQGGRLRWAKLRNVLLAVAQFRQP
IKRRQKSGSVESRGEAMMDDQRLRPHSTLIRQSSWSGLSESSSHESLTGSLVKSNSLSSM
KTPSDKVRLCKNTALRNAATNGCDDPVSRKPPIGRRDTSTPPPAPPGGVLVQRSQVCLST
FYKDCAESADSESDCSCQPVERDGRPAGTRDTAGRNKVVDENYNNVASPSRGGLAGKLQQ
LLTPTRHRVSVRRAASVDDRRPGGGAGIGRRVSEQRQSRKAQVAETLLKAKERLVSATSE
SSLSVGSDLDLTDTPSPAYPLRRSWDANQEATGLEVLMSSCSLCRSCNSLVYDEEIMAGW
TSDDSNLNSSCPFCCASFVPFLNAEICDFGPVSSTERSNWNMEDEVESAVRPPSGQEASL
RHQCNGLSEDSSSETSSYSENSRATTGSSVGGAPQVTVAYLSPLVLRKELESLLENEGEA
VLAQPQFLDNHSIIFWNLVWYFQRLGLPNNLLQLVRASPLVSQFTQSENSAVRVRLLWDT
LTPDVDQWPPLYILWRIHSGVPMRSYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAVTLFL
DTLAKQPGSAWTQRSLYREFLFLTLAAMGKDHVAAFDKKYKVAYTRLSGTLGREELRKKR
AQPPSPKAVDCRRSFHPPLEC
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtggagggcagacagacggcatgacagaggagaaatgtccccagctggtggac
tactttgtagtggcgggtctcgaccctgcaggaccctggaggcccctggatgaggatggc
aggacctccgccaactcctcctcgacaccctcctcgtcatcttcatcgggccgagcggtg
gagtcggtgacggacctggcggtgattgcccgggggctcggggaggaagtgccggagggc
ttcacctgcatcgagaggacgctgggcggacactcagccgagctgagcgccggcctcatc
aacaacccgcacctttacctgtgctaccgccgagggcgagacaagccgcccatcctggac
ctcggggttctgtatgaagggaaggagcagctgaagcagggctggtacgtcatcgagacg
acgccctacagccgctcggccagcctgagcgccggtggcgctccgacggctcaccgggtg
ttcctgacgtaccggcgggctctggactctcagggcctccacacgctgggtgtcaccgac
atcgccctgctgctgcccagcaaaggagaggtcgccccgcacaccttctgccgggtcgac
aagaacctcaacaccggcatgtggggtccagctctgtatgtgtgctacaagagagctgtg
gccaaagccaacgccttggtctacaaagccaatctgatcagccggtacccagaggaggac
ctggaggcgtttcctctgccggagtcggttccggtcttctgtctgccgatgggcgtcacc
gtggagagctggccgctgaacaccaagtaccagctgcccgtcttctccaccttcgttctc
acctccgcctccggggacaaggtttacggagccgccatccaattctacgagtcgttctcc
cgggagctgctgtcggagcggcagagcgtgaggctcgggctgctcagcgtggtcgaccgg
cggccgatcaccaaccgcagcctgcaggtgaagaagagcatctgcgtcctctctcactgg
cccttcttcaacgtcttccagaagttcctcaccttcgtctacagatactccatctccgga
cctcacgtcctgccgctcgaaaaacacatctccagcttcatgcacaacgtcccgtttccc
tccccacagaggcctcgcatcctcgttcagctctctccgtacgacaacctgctgctctgc
cagccggtctcctctccactcccactcagcggtgcgagcttcctgaagctgctgcagaac
ctcggcccggagaacgcctgcacgctgctgctcgccgtcctcaccgaacacaaactgctg
ctgcactcgctccggcccgacgtcctgacctccgtcagcgaggcgctcgtctccatgagt
ttccctctgcgctggctctgtccgtacatccctctgtgtccgctgcagatggccgacgtg
ctgctcgctccgatgccgttcatcgtgggcgtccactccagctacttcgacctgtacgac
ccccccaccgacgtggtgtgtgtcgacctggacaccaacaccatctttcagtcagaggac
aagaagccgttgtcatggcgatcattacccaggaagcacggcaagactctgttcaacacc
ctcaccaacctgcacaagaccctggagaagatttgcactcctggtcaggaggaggcgacg
ttggagttcctgctgacggactacgatcagatctacaggagtcagaagcagctggagttg
gagatccaggaggcgttccttcgcttcatgagctgcctgctgcgaggataccggacgttc
ctgctgcccatcacccaggcgccgtccgacaccaccaccgactgcagctcgctgttcaac
ctgcagggtttcctgaaatctcgcgatcggacgcagcagaagttttacagccagctgacg
aggactcagatgttcactcagttcatcgaggagtgttcgtttgtgagcgaccgacacgcc
tgcctcgagttcttcgatgagtgcgtccaaaaggtggacgtggagaagccggaggaggtg
aggctgatcgatctggatgagactcacagcggggaacacacggtcttcatcatgcctcct
gaagaacctcaagaaccggacgggtccgagtgccccgccctctacagctatgaaaccttc
cccacgctgaggctggagctctttgaccggccccaggatcagctccgggtcccggctaag
ggcagcgctccgagtagccccgcccccagacgcacaaaacaggagatcaagttggcccag
aagcgagcccagaagtactcggcggtggcggacatgtggtccaagtgtctgctgggtcac
tgttacggcctctggttcatctacctgcccaccttcgtcaaggcggagagcgcgaaggtg
cgcgcgctgcacacggcctacgacgtcctcaaacacatggagaaccgcaaggtggtgctg
ccggacgaggtgtgttacaggatcctgatgcagctctgtggtcagtacggtcagccagtc
ctcgctgttcgagtcctgctggagatgaagaaggctgggatcacccccaacaccatcacc
tacggatactacaacaaggcagtcctggagagcaagtggccgtccaccagtcagggcgga
cgtctccgctgggccaagctgaggaacgtcctattggctgtggctcagttcagacagcca
atcaaacggcgtcagaagagcggctcggtggaatcgcgaggagaagcaatgatggatgac
cagaggctccgcccacactcgactctgattcgtcagtccagctggagcggtctgtctgaa
agctccagtcacgagtctctgacgggttcgctggtgaagagcaacagtctgagcagcatg
aagacgccgagcgacaaggtccgtctctgcaagaacaccgccctccgtaacgcagcgacc
aacggctgcgacgaccccgtctcccgtaaacctcccataggacgcagagacacctccaca
ccgcctccggcgccccctggtggtgttctggtccagaggagtcaggtctgcctctccacc
ttctacaaagactgtgccgagtcggccgactctgagtcagactgcagctgccagccggtg
gagagagacggcagacctgcaggaactcgagacacggccggcagaaataaagtcgtggac
gagaactacaacaacgtcgcctccccgagccgaggaggtctggcaggaaaactccagcag
ctcctcactccgaccagacaccgagtgtccgttcgacgagccgccagcgtggacgaccgg
cgaccaggaggaggagcagggataggacgaagggtgtctgaacagagacagtcgaggaaa
gctcaagtggctgaaacgctgctgaaagccaaagagaggctggtcagcgctacctccgag
agttcattgtctgtaggaagtgacctcgacttgacggacacgcccagtccagcctatcct
ctgcgccggtcctgggacgccaatcaagaggcgacgggcctggaggtgttgatgtccagc
tgctctctgtgtcgcagctgtaactcgttagtttacgacgaggagatcatggccggctgg
acgtcagacgactccaacctgaactcgtcctgcccgttctgctgcgcctccttcgtcccc
ttcctgaacgctgagatatgtgacttcggacctgtcagcagcacggagcgcagcaactgg
aacatggaggacgaggtggagagcgccgtcaggccccccagtggtcaggaggcctccctg
cgacaccagtgtaatggtttgagtgaagactccagctccgagaccagcagctactccgag
aacagcagggcgaccacgggttcctcagtgggcggggctccacaggtgaccgtggcctac
ctgagccctttggttctgaggaaggagctggagagtctgctggagaacgagggcgaggcg
gtgctggctcagcctcagttcctagacaaccactccatcatcttctggaacctggtctgg
tactttcagcgcctcggactgcccaacaacctgctgcaactggtcagagcatcgccactg
gtcagccagttcacacagtctgagaactcggcggtgagggtgaggctcctctgggacacc
ctgacccctgacgtggaccagtggccgcccctctacatcctgtggaggatccacagtggc
gtcccgatgaggagctacagctggcggaggcacaaccacccgttcactctgtccttcctg
gaggaggtgctgcggtgggtcggcatgaacgaggtgcacaaagccgtcaccctgttcctc
gacacgctggccaagcagccgggctcggcctggactcagaggagtttgtacagagagttc
ctcttcctcaccctggcagctatgggcaaagatcacgtcgctgcgtttgataaaaagtac
aaggtggcgtacactcggctcagcggcactctgggtcgggaggagctcaggaagaagcga
gctcagcctcccagccccaaagccgtcgactgcagacgcagcttccacccgccgctcgaa
tgctga
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integrated database retrieval system
