Larimichthys crocea (large yellow croaker): 104933874
Help
Entry
104933874 CDS
T04659
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104933874
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Protocadherins
104933874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4832
Motif
Other DBs
NCBI-GeneID:
104933874
NCBI-ProteinID:
XP_027139256
LinkDB
All DBs
Position
X:complement(38341044..38360864)
Genome browser
AA seq
1038 aa
AA seq
DB search
MIWFIFLLSILDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGNKFAE
LVLEKSLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQTVYSVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSNHNAPRIKDLFNIDARTGRIEVAGEVDYEES
STHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSGDNGQMSCEILGDVPFKLKSSFKNYYTIVTDGPLDRENTDSYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDAGAAELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVMLVDSVVE
GRSGDRGSSSKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRQARGRKQKKLSKSDIMLVQSTNVTTGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFMPSDGRQGPDYRSNLHVPGMDATLPDTEVP
PSVNLSDQLTMTSSTASSSDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLSRKRIC
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttcatattcctactctccatcctggatggagctgtctctcagctacactac
tccgtgccagaggagcaggagcctggctctgtggttgggaatattgcagaggatttgggg
ctggacattaccaaactttccgctcgtcgctttcagacggtgccaagctcacgaacacct
tatctggaggtgaacttagagaacggcgcgctcgtggtgaaggagaaaattgaccgggaa
gaaatctgtaagcagaccatcccgtgcctattgcacctggaggtgtttctggagaacccg
ctggagctctttcgcgtggagatcgaggtgatggatatcaatgacaatccacccagcttc
cccgagacagacatttccgtggagatatcggagagcgccatccccgggacccgtttcccg
gtggagaatgccttcgatcctgacgtgggcacgaacgcgctcagcacatatgccataacg
aataataactatttttaccttgacgtgcagacacagagcgacgggaacaagttcgcagag
ctggtgctggagaagtcgctggacagggagcagcaggcggtgcaccgctatgtgctgacg
gctgtggatgggggcatcccgcagcggaccgggacggctctcctggtcgtcaaagttctg
gactctaacgataacgcgcccacctttgatcagactgtgtactcggttaacctgcgggag
aactctcccgtgggcactctggtcatccaactcaacgccacggatgttgacgaggggcaa
aacggggaaatagtttattctttcagcaaccacaacgcgcctcggataaaggacttattc
aatattgatgccagaacaggtaggatagaggtggcgggtgaggtggactatgaagagagc
agcacgcatcagatttacgtccaggctaaagatcttggagctaacgctgtccccgcgcac
tgcaaagtcttggtcaaactcgtggatgtgaacgacaacacaccggagatcggtttcagc
actgtgactgaatccgtaagcgagcaggacgccccaggcacagtgatcgcacttttcagc
gtctcggaccgggactctggtgataatggacagatgagctgcgagatattaggagacgtt
cctttcaagctgaaatcatcttttaagaactactacacaatcgtgacggacggaccgtta
gacagagagaacacagattcatacaccatcaccgtggtggccaaagataagggtcagcca
tcgctcgccaccagcaagtccattaaagtgcacgtctccgacgagaacgacaatgcgccc
cgttttacgcaggcggtttatgatgtgtatgtgactgagaacaatgtgcccggtgctttc
attcacgctgtgagcgctctggaccctgacataggacagaacgctctcattacttactcc
atattggagtgtgacatacagggcatgtctgtggacacgtatgtgtccataaaccaggac
accggctacctttacgcgctgcgctcttttgattacgagcagctgaaggagtttagcttc
atggtccaggcgaaagacgctggtgctgccgagctcttctcaaatgccactgtaaatgtg
atcatagttgaccaaaatgacaacgcacccactgtaatagccccaatcgggaaaaacggc
acagccaaagagcacctgccgcgctctgcggagcccggctacctggtgacgcgcattgtg
gccatggatgcggacgatggcgagaacgcacggctgtcctacagcatcctgcggggtaat
gagatggggatgttccgcatggactggaggacgggggagctgaggacagcacgccggatc
tcacccaagcgggacccgcagggctactacgacctgctgatcgaagtgagggaccacggg
cagccccctctctcctcatcggcgagtgtgagtgtaatgttagtggacagtgtggttgaa
ggccgcagcggagatcgcggctcgtcctccaaggcaaaggagacctcccttgacctcacc
ctcattctcatcatcgccctgggctccgtgtccttcatcttcctcctggctatgatcgtg
ctggccgtgcgctgccaaaaggacaagaagctcaacctgtacacgtgcctgctggccggt
gactgctgtctgtgctgcggctcgtgctgtagcaggcaggctcgcggccggaaacagaag
aagttgagtaaatccgacatcatgctcgttcagagcaccaacgtcacgacaggggtcggg
cccgtggggcaggtgcccgtagaggagtctggtgtgggcggcgtgggagggggcttcggc
tcccaccaccaccagaatcagaactcctattgctaccaggtgtgtctgacacctgagtcc
gccaaaacggatctgatgttcctcaaaccgtgcagcccgtcccgcagcactgacacggat
cacaccaacccctgcggcgccatagtcacgggttacagtgaccaacaaccggacatcata
tccaatggcagtattctctctaatgagacaaaacaccaacgagcagaactcagctatctg
gtggacagacccagacgtgtcaacagttcggccttccaagaggcagacatcgtcagctcc
aaagacagtggtcacggtgacagcgaacagggcgacagtgaccacgacgccaccaaccga
ggtcattcggccggtgctgacctgttctccaactgcacggaggagtgcaaggccctgggc
cactccgaccgctgctggatgccatccttcatgccatccgacgggcgccagggaccggac
taccgcagcaacctgcacgtacccggcatggacgccacgctgcccgacactgaggtaccc
ccgtctgtcaacctctccgaccaactcaccatgacctcgtccaccgcttcgtccagcgat
aggtcattctccacctttggcaaggacggtcaaaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaacccacctttctctcccgcaaaaggatttgctag
DBGET
integrated database retrieval system
