Larimichthys crocea (large yellow croaker): 104933918
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Entry
104933918 CDS
T04659
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104933918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104933918
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104933918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
PUMA_CC
DUF4763
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
104933918
NCBI-ProteinID:
XP_027138736
LinkDB
All DBs
Position
X:17656867..17681301
Genome browser
AA seq
2532 aa
AA seq
DB search
MAAVLLQVLERAELNKLPKGAQNKLEKFVTELQNANEALKTQHERLKADSEQQYFDIEKR
LAESQEQILSATKDLQTLKEENKKLNEELSTLKGIEGETSEDKPPQQQTKAKYEIEAEKR
ELARLLEKRTQEAENLTEDVKRLNEKLTETSKVKMELQLKLDELQSSEASVQHREKRMEQ
EKELLEKKIEWLTTELKTKTDELLNTNREKGKEILELQGRLKTSEEQVNRLESQLTSLKE
TIESQNKRAGDLNTKLKQAKDEQSAMEEKYRNELNAHVKLSSLYKGAATDMESKNQELSR
AVEELSKLVKDSGEANKSLEKKVSEGEELKTRLEAELREKVKKMEKELENATMKAAGKRC
CVPSLTEEQLDTMCPSAAAIAAIVKPGMKFFDLYNAYAECQMHLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKEEAKQRCDSMERD
KLRTERQLEDTSTQVCTLLVELEEARGNQVTKDDANISSTSEVISQCPLSFRSVEELQRQ
NQSLLGRLRELEEEKDRQQSQVTSARVSELEVSVDKLQKEAEQLREQRNQQKQLADSSTR
QRDMYKALLTQSTGFSLPAPGPDSTSLPAHVRPSVPATRSTPQRAAAAESAQTAQAKAAL
KQLNDAFTLYKKEKAENDKMLNETNDKLQKQLTELRSSHAKLTSQLEFSNKRYEMLQETV
SAYRREISALQDRTQKMAATAQRHEYIIHTMSQDLRLSNEKLALEEVRVENLTKERDMLR
QAESRLNREKEAMLAEQRNQNLLLTNLKTIQLTMERTETDSRQRLNNKIEQLEAELASMK
TRLDQEVAQRHSLGRTMDAQLLEAKKQLETQNTLQQKTRELLRGSEQQVTALKAQLASPS
SSETTTTPSITTTPATRAAALRAPLRVRSPVPAASQQPSQSEQELVEVKGHLRSAEEQIG
ELTEQIKNANASVEQYRAVVLALEDSLKKEKESRSPLEIRLKESEELQKQLEKRILELER
MKQQEQELKRKAVEEVEKQVCELQRSLKASQAEQQEALERSTAAVTLEQKAIQESLLQTK
LAGEAQAKYERELMLHAADVEALQELKKRSQQEAARKRELEEQLNKTSSLLQEKTKAWNT
VERQLKEDLSNKTRHCAELGKQNTLLHQQMDDMASSNRQAQQQQLQQVDLSFSEEGKTTE
QILEILRFVRREKEIAVAQSEASEGEALRYKQRVEHQDREVKELQEALNAEREKMQATSK
TLAQQEEQLKKIETLGVLQETNRMLKMDKDKLEQELHQAQAKVTKLQSDISPLHHSLSQL
SEKNGSLQADKRILEEDLKRLKAKTQQLISQQKDGDVEEKQKLTTERETQQRRIAQLAEE
TAKLKTELARSSVSSNSAQSQLQGLRDSLARLMSERDTLKKDLESKNSDILEKNKTITQV
KKIGRRYKTQYEELKAQHDKMVAETAAKAGSETGQSKEVQQELTKAQEELNKAKEELNTL
KEEAQKKQEEAQKSKQELEEAQKENQQTKEKFQEVQNQLTQNQNQLTQVQSQLSQTQTQL
QQNQNQLTQSQKELQQAKTQTQQAQNQLKSVQAQAQARQNQIQQFQRELQQAKDTIQQNL
TNQKELQQSQQSHNQEVSNLKTALSQTESKVTELQGHMDNLQKLIGEREADIKRLQEQLT
EANQAIEANQATHANQSQSSQSIQASDANAAGEANQALQEELAKLRQELSEGKNREEQLR
QQMAEKEEKTKKVFMGAKTKINQLNSAKEQLSQENEELKQSKEELEVRMSALKSQYEGRF
LRLDRELRELRETQAHSEPREEPQDQSGAKVGDQARSTDQRQISLKSPAQDRGSSSMTDP
PTANIRPTPSTPSPGNKPSPSTGSKATPRASIRPMVTPATVPIPTPTATVMPTTQTDSQE
VLMSAGASVHSTSSSLVNTPTSITQPTSTQATAFVQPTQQQVANQDAGPSMEAERPSTSS
SLIGTAGSKRSREEEEEDEESRPESSHTPPTTKKLRLKPTIALQMEGDEEIEGELRDEGE
QQDSPDDSQELPEEGFPTLAEDDEDIEEEGVSQSVPSDLGSALIRDVIVIETDSDSRESK
EGEAKQEDEGEEEEEEEEEEEEEEEEEEYKEEEEDDDEDDAGDSGMREGEESNEASREAE
EEGGEEEPSDAPNAEENMCGASLDSQRPSEPSHSSEGSSGATSESDPPRESVHFASTPSS
SSALSPSLSSSSLTPRLPQPRRPPHPLPPRLYIQPPAPELGPPHTQRQPSQLRRPSGGGR
GPQLTPGIGSMQHFFDEDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLTRFRFGPPEDL
LPQTSASHSDLGQLASQGAVCAGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFT
ESLPSDGGDNMASQSVPMVTASTGMASAADDGDEVFMEQEGDGPGIESSLESQTDMEASG
QQSDDPSLPSTSQEPDTSSVPQRRTVSSQPLISSLSARGARGGRGEARTLLSRRGTYSRG
GRGGAMGRGGIA
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggagcgggcggagttgaacaaactcccgaaaggc
gcacaaaacaagctggagaagtttgtgacggagctgcagaatgctaacgaggcgctcaag
acccagcatgagcggctcaaagcggacagcgagcagcagtactttgacattgagaagaga
ctggcggagagtcaggaacagatcctgtctgccaccaaagacctgcagacgctcaaggag
gagaacaaaaaactcaatgaagagctgagcactctgaagggaatagagggagagacctct
gaagacaaaccaccacaacagcaaaccaaagccaagtatgagattgaggcagagaagaga
gagctggcgaggctgctggagaagaggacgcaggaggcagaaaaccttaccgaggatgtg
aagcgtctgaatgagaagctgacagagaccagcaaagtcaagatggaactgcagttgaag
ctggatgagctacagtcatctgaggcgtctgtacagcaccgggagaagcgcatggagcag
gagaaagagttgctggagaagaaaatcgagtggttaacgacagaactgaagaccaaaact
gatgagctgttgaacaccaacagagagaaaggcaaagagatactggagctacagggccgc
ctgaagaccagcgaggagcaggtgaacagactggaaagtcagctcacttctctgaaggaa
accattgaaagccagaataaaagagccggagacctcaacacaaaactgaaacaggctaaa
gacgagcagagtgccatggaggagaaataccgcaacgagctcaacgctcacgtcaaactg
tcttcactctacaagggggcagcaacagacatggagagcaagaaccaagaactgagcaga
gcagtggaagagctcagcaagctggttaaagacagcggggaagccaataagtctctagaa
aagaaggtgtcggagggagaagaactaaagacgaggcttgaggcagagctcagagagaag
gtcaagaaaatggagaaggagctggaaaacgccacaatgaaggctgctggcaaacgctgc
tgtgtgccctccctgactgaggagcagttggacaccatgtgtccatcagcagctgccatc
gctgccatagtcaaacccggcatgaagttctttgacctgtacaacgcgtatgcagagtgt
cagatgcatcttcagctggagaagcaggagaccaggagagtgagcagagtgctggacgag
attgtccaggaggtcgagtccaaggctccagtcctgaagcgtcagagagaggagtacgag
agcatgcagagatccatggcctctctgtgcaacaagctggagcaggctcgaacggagatc
tacagtttgcagaaagagaaagaggaggccaagcagcgctgtgacagcatggaaagagac
aaactgaggacagagagacagctagaggacacatctacacaggtgtgtactcttctggtg
gagctagaagaagccagaggtaatcaggtgaccaaggacgacgccaacatttccagcacc
tctgaggtcatcagtcagtgcccgctgtccttccgaagtgtggaggagctgcagaggcag
aaccaaagcctgctgggaaggctgagggagctggaggaggagaaggacagacagcagagc
caagtaacgtcagcacgtgtgtctgagttggaggtcagtgtggataagcttcagaaggag
gcagagcagctgagagagcagaggaaccagcagaaacagctggcagactccagcaccaga
cagagagacatgtacaaggccctgctgacacagagcaccggcttcagcctgcctgctcca
ggtccagattctacatcccttcctgcgcatgtcaggccctcagtcccagcgactcgctct
actcctcagagagctgctgctgctgagtcagcacagactgctcaggctaaagctgcgttg
aaacagctgaatgatgccttcaccctgtacaagaaggaaaaggcagagaacgacaagatg
ttgaatgaaacaaacgacaagctgcagaagcagctgacagaactccgctcgagccatgcc
aagctcacctcccaactagaattcagcaacaagaggtatgagatgctccaggagactgta
tcagcctaccgcagagagatttcagccctacaggacaggactcaaaaaatggctgcaacg
gcccagcgacacgagtacatcattcacacaatgagccaggacctgagattgtccaatgaa
aaactggcactggaggaggtgcgcgtagagaacttgactaaagagagagacatgttgaga
caagcggagagtcgactcaatcgagaaaaagaagccatgctggctgagcaacgtaaccag
aacctgctgctcaccaacctcaagacgatacagttgactatggagcgcacagagacagac
agccgccagcggctgaacaacaagatcgagcaactggaggcagaactggcttcaatgaag
accaggctggaccaggaagtagcacagagacacagccttggacgcaccatggatgctcag
ctattagaagctaagaaacagctggagacccagaacaccttgcagcagaagaccagggag
ttgttgcgtggctctgagcagcaggtgacagcactgaaagcccagctggcttctccttca
tcctctgagaccaccaccacccccagcatcacgaccaccccagctaccagagctgcagcc
ctcagagccccgcttcgagtgcgctctccagtgccagcagcctctcagcagcccagccaa
tcagagcaggagcttgtggaggtgaaaggtcacctgcgttctgccgaggaacaaattggt
gaactaacagagcagataaagaatgctaatgctagtgtggagcagtacagggctgtggtg
ctggctctggaagacagtctgaagaaagaaaaggagtctcgctcccctctggagatccgg
ctgaaggagtcggaggagctgcagaagcagctggagaagaggattttagagttagagaga
atgaagcagcaggagcaagaactcaagagaaaggctgtggaggaggtggaaaaacaggtg
tgtgagctgcagcgcagtctgaaggccagccaggcagagcagcaagaggcgctggagaga
tctactgctgctgtcacactggagcagaaggccatacaggaaagcctgctgcagacgaaa
ctagctggagaggcgcaggctaagtatgagcgggagctcatgcttcatgctgctgacgtg
gaggccctgcaggagctaaagaaaagatcccagcaagaagcagcacggaagagggagtta
gaggagcaactgaacaagacctcttcactcctgcaggagaaaaccaaagcctggaacaca
gtagagagacagctgaaggaggatctgtccaataagactcgtcactgtgcggagctgggg
aagcagaatacactcctgcaccaacagatggatgacatggcctccagcaatcgtcaggca
cagcagcagcagctgcagcaggttgacctgtcgttcagtgaggaagggaagaccactgaa
cagatactagaaatactcaggtttgtgcggcgtgagaaggagatcgccgtggctcaatcc
gaggcgtctgagggagaagctcttcgctacaaacagagagtggaacaccaagacagagaa
gtgaaggagctacaggaagctctgaacgctgagagggagaaaatgcaggccacatcaaag
actctggcccagcaggaggaacagctgaagaagatcgagactctcggtgttctccaagaa
accaacaggatgctgaaaatggacaaagacaaactggaacaggagctgcatcaagctcag
gctaaagttacgaagctgcagtcagacatcagcccgctgcatcactctttgtctcagctg
tcagagaaaaatggctccctgcaggccgacaagaggatcctggaagaagacctcaaacgc
ctgaaggctaaaacacagcaactgatcagccaacagaaagacggtgatgtcgaggagaag
caaaaactcaccactgagagagaaactcagcagagacgcatcgcacagctggctgaagag
acagccaagctgaagactgaactggcaagatccagtgtcagcagtaactctgctcagtct
cagctgcaaggcctcagagactctctggcccgtctgatgtcggagagagacacccttaaa
aaagacctggaatccaaaaacagcgacatcctggagaagaacaagaccatcacccaggtc
aagaagattggacgacgctacaagacccagtatgaggagctcaaagcccagcatgacaag
atggttgcagaaacggctgctaaagcgggaagtgagacgggtcagagcaaggaggtacag
caggagctgacgaaagcacaggaggagctcaacaaggcaaaagaggagctgaacacactg
aaggaggaggcgcagaaaaaacaggaggaggcccagaagtctaagcaggaactggaggag
gcccagaaggaaaaccagcagaccaaggaaaagttccaggaggtccagaaccagctgaca
cagaaccagaaccagctgacacaggtccaatcccagttgtctcagacccagactcaactg
cagcagaatcagaaccagctgacccagagtcagaaagagcttcagcaagcaaagacccag
acccagcaggcacagaaccagttgaaatcagttcaggctcaagctcaggcccgtcagaac
cagattcagcagttccagagggagctccagcaggctaaagacaccattcagcagaacctt
actaatcagaaagagctacagcagagccaacagagccacaaccaggaagtcagcaacctc
aagactgctctcagccagacagagagcaaggtgactgagcttcaaggtcacatggacaac
ctgcagaagttaattggtgagcgtgaagcagacatcaagcgtctgcaggagcagctgact
gaagctaaccaggctattgaagctaaccaagctacacatgccaaccagagccagagttct
cagtccatccaggccagtgacgctaatgctgctggtgaggctaaccaggcgctacaagag
gagctagcaaaactgagacaagagctttctgagggcaagaaccgagaggagcagctcaga
cagcagatggctgaaaaagaggaaaagaccaagaaggtgttcatgggagccaagaccaaa
atcaaccaactaaacagtgccaaggagcagctcagtcaggagaacgaagagctgaaacaa
agtaaggaggagctggaggtgagaatgagcgccctcaagtctcagtatgaaggacgattt
cttcggctggaccgagagctgagagaactgagagagacgcaagcacactctgaacccaga
gaggaaccacaggaccagagtggagccaaggtgggtgatcaggccaggtctacagaccag
agacagatatctttgaagagccctgcccaagacagaggaagctccagcatgactgatcct
cccactgccaacatccgccctaccccaagtactccatctcctggcaacaagccaagcccc
tccactggtagcaaggctacaccccgagccagcatccggcctatggttaccccggcaact
gtccccatcccgacgcccaccgccacagtcatgccgaccacacagactgacagccaagag
gtgctgatgagcgcaggagcctctgtacactctaccagctctagtctggtaaacacgccc
acatcaataactcagccaaccagcacccaggccacagcttttgttcagcccacccagcag
caggtagccaatcaggatgcaggccccagtatggaggcagagcgaccatctacatcctcc
tctctgattggaacagccggttcaaaacgaagcagagaggaggaggaggaagacgaagag
agcagaccggagagttcacacacacctccaaccactaaaaaactacgactgaaaccaaca
atagcactgcagatggaaggtgatgaagagatcgaaggagagctgagggatgaaggagaa
caacaggattcaccagatgacagtcaggagcttccagaggagggttttcctaccttagcc
gaagatgacgaggacattgaggaagaaggcgtgtcccagtctgtgccctctgatctgggc
tctgctcttattcgggatgtcatcgtgatcgagacagacagtgacagccgtgagagcaag
gagggggaggcgaagcaggaggacgaaggtgaagaggaggaagaagaagaagaagaggag
gaggaggaggaagaagaagaggagtacaaggaggaagaggaggatgacgatgaagatgat
gctggtgacagtgggatgagagaaggagaggagagcaatgaggcgagcagggaggcagaa
gaggagggaggggaggaggagccatcggatgcccccaacgcagaggagaacatgtgcgga
gcgtcgttggactcccagcgtccctctgagccatcgcacagcagtgaaggcagcagtggc
gccacatcagagtccgatccacccagagagtcggtacactttgcctcgactccctcctcc
tcctctgcactctccccttccctctcctcctcatccctcacaccccgcctcccccaacca
cggaggcccccacaccccctcccaccacggctctacatccaacctccagctccggagctg
ggacccccccacacacagagacagccgtctcagctgcgcaggccttcaggaggaggacgc
ggacctcaactgacacctggaataggcagcatgcaacatttctttgatgaggacgacaga
atggttcccagtactcccacactggtagtcccacaccgcactgatggctttgctgaggct
atacattctcctcaggtagcgggtctgaccaggttcaggtttggacccccagaggacctc
ctacctcagacgtcagcatcacactctgacctgggacagctggcctctcaaggagctgtt
tgtgcaggtctggggatgtacgagtctcctctgttcctggccgctcacgatgaagatgga
ggagggaggagtgtccccaccacacctttacaagtggcagcaccagtgacggttttcaca
gagtctctgccctcagacggcggcgacaacatggcgtcccagtcggttcccatggtaacc
gcctcaaccgggatggcttctgctgcagatgatggtgacgaagtcttcatggagcaggaa
ggagacggtcctggtattgaatcctctctggagagccaaacagacatggaggcgtcagga
cagcagagtgatgatccatcactgccatctaccagccaagaacctgacaccagcagtgtt
cctcagcggcgcacagtgagcagtcagcctctgatcagcagcctgtcagccagaggagcc
agaggagggaggggggaggccaggacgctactctcccgcagaggaacttactcccgagga
ggaagaggaggagccatgggcagagggggcatcgcctaa
DBGET
integrated database retrieval system
