Larimichthys crocea (large yellow croaker): 104933928
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Entry
104933928 CDS
T04659
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104933928
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104933928
Membrane trafficking [BR:
lco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104933928
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104933928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_COPA_B
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Phage_H_T_join_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
104933928
NCBI-ProteinID:
XP_027141545
LinkDB
All DBs
Position
XII:complement(16825314..16832047)
Genome browser
AA seq
926 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEHYLRESCLGTTRPATDYPLVTLNEDRNILEEA
QGYEPKGTFIPSVAKTQSSEESVAAAHVAAEPAAAAAVEDEEEEEEIPAFSEKDKILDEL
EVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggaggctgacagccaggtcagaccgtgtgaagagt
gtggaccttcacccgactgagccatggatgctggccagtctgtacaatggcagcgtctgt
gtgtggaaccacgaaacacagactcttgtcaagacttttgaagtgtgcgacctccctgtc
agagcatctaagtttgtggcaaggaagaactgggtcatcacaggagcggatgacatgcag
atccgtgtgttcaactacaacaccttggagcgggtccacatgtttgaggctcactctgac
tacatccgttgcatcgcagtccacccgacccagccctacatcctcaccagcagtgatgac
atgttgatcaaactgtgggactgggagaagaaatggtcgtgcagccaggtgtttgagggt
cacactcactatgtcatgcagattgtcatcaaccccaaggacaacaaccagtttgccagt
gcctccctggacagaacgattaaggtttggcagcttggctcttcgtctcccaatttcact
ttggagggtcacgagaaaggagtcaattgcattgactactacagtggaggagacaagccc
tacctcatctcaggggctgatgatcgccaagtcaagatctgggactaccagaacaagacc
tgcgttcagactctggagggccatgcccagaacgtctcttgtgtcagtttccacccagag
ctgccaattatcatcactggatcagaggatggtacggttcgcatctggcactcaagcact
taccgcctggagagcactctgaactatggcatggagagagtgtggtgtgtgtgcggcctc
aggggctccaacaatgtggcacttggatacgacgaaggcagcatcattatcaaggtgggc
cgagaggagccggccatgtctatggacactaacggaaaaatcatctgggccaaacacagt
gaaatacagcaagccaacctgaaggccatgggtgatgctgagatcaaggacggagagagg
ctgccattggctgtcaaagacatgggcagctgtgagatttatccccaaaccatccagcat
aaccccaacggaaggtttgttgtggtgtgtggagatggagagtatatcatctacaccgcg
atggctttgaggaacaagagcttcggctcagcgcaggagtttgtctgggcacatgactca
tctgaatatgccatcagagaaagcaacagtatagtcaaaatcttcaaaaacttcaaagaa
aagaaatctttcaagcctgacttcggagctgaagggatctatggaggtttcttgcttggg
gtgaggtccgtgaatggcctggcattttatgactgggaaaacacagagctgattcgccgc
attgagatccagcccaaacacatcttctggtcagactctggtgaactggtctgcattgct
acggaggagtccttcttcattctgcgttatatggcagataaagtagccgcctctcaggag
aataatgaaggagtgaccgaggatggtattgaagatgccttcgaggtccagggagagatc
caggagattgtgaagactggactctgggttggagactgctttatctacaccagctctgtg
aacagactcaactactatgtaggaggagagatcgtcactatcgcccacctggacagaacc
atgtacctgctgggttacataccaaaagatgatcgtctgtatctgggagacaaggagctc
aacattgtcagctactccctgctggtctccgtactggagtaccagactgctgtaatgagg
agggactttggaatggctgacaaggtcctaccgacaattcctaaagagcaacgaaccagg
gtggcacatttcttggagaaacagggtttcaaacagcaggctctggccgtgtccacagac
ccagagcacaggtttgagctggcgttgcagctgggagagttgaagatagcataccagctg
gctgtggaggcagagtcggagcagaagtggaagcagctagcagagctggctatcagtaag
tgccaattcggcctggcccaggagtgcctgcaccacgcgcaggattacggtggcctgctc
ctccttgccacagcctctggtaacgccactatggtgggcaagctggctgagggggcagaa
agggacggcaagaacaatgtggccttcatgacctatttcctgcaggggaaacttgatcag
tgtttggagctcctgatcaggacaaacagactacctgaagctgcgttcctggctcgcacc
tacctgcccagtcaggtgtcccgtgtggtcaaattgtggagggagaacttggctaaggtc
aaccagaaggcggctgagtccctagcagaccctacagaatacgagaatctgttcccaggg
ctgaaagaagcctttgcagccgagcattacctgcgagagtcttgcttgggcaccactaga
cctgccacagactatcctcttgtcacgctcaacgaagacaggaatattcttgaggaggca
cagggatacgagcccaaaggaaccttcattccctctgtcgccaagacacaaagtagcgag
gagtcggtggctgcagctcatgtcgctgctgaacctgctgctgctgctgcagtagaggat
gaagaggaagaggaggaaatccctgcattctcagaaaaagacaagattctggacgagctg
gaagtagacctggacaacatggagctggatgacatcgataccacagacgttaaccttgat
gatgactttctagatgattga
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