KEGG   Larimichthys crocea (large yellow croaker): 104933988
Entry
104933988         CDS       T04659                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104933988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lco03041]
    104933988
Spliceosome [BR:lco03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104933988
 Complex B
    104933988
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 104933988
NCBI-ProteinID: XP_010747846
UniProt: A0A6G0HUT5
LinkDB
Position
XII:complement(29848592..29864165)
AA seq 466 aa
MSDFEEFEKQLSENRQERERERHKKRSRSGSPGRGDKHRSWSKDRGSRSREKRSRSRDRK
SRDRRSSSRDHKKHSHSPRRTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIALL
ATSTTTGVAAAPTQVPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAP
SNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRL
QNSGMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGSVRSIEIPRPVDGVEVPG
CGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtcggacttcgaagaattcgagaagcagctcagcgagaatcggcaagagcgagaaaga
gaacgacacaaaaagaggagtcgcagcggatctccgggccgaggcgacaaacatcgcagc
tggagcaaagaccgggggagccggagccgagagaaacggagccgcagcagagaccgcaag
agccgggaccgccggagctcctcccgggaccacaagaagcacagccactctccgaggcgg
acgagaaagaaaaggacctgcaaatactgggacgtccctcctcctggctttgaacacatc
acaccaatgcaatataaagctatgcaagcggccgggcagataccaacaatagctctgctg
gcgacgtccaccaccaccggggtggctgctgcaccgacacaagtgcccatagttggcagt
cagatgacaagacaagccagacgcctctatgttggaaatattccctttggagtgaccgag
gagtccatggcagagttcttcaatgctcagatgcgcctcgcgggcctttcacaggccccg
agcaaccctgtgctcgccgtgcagattaatcaggataaaaactttgctttcctagagttt
cggtctgtagatgagacgacacaggccatggccttcgatggaatcattttccagggtcag
tctctgaagatcagaagacctcacgactatcggcctttgcctggtatctcagagcagccg
gctttccacgtcccaggtgtcgtctccacagtcgttcccgattccccccataaactgttt
ataggaggtctgcctaactaccttaacgatgaccaggtaaaggaactcttgacatcattt
gggcccctcaaagcgttcaatctagtgaaggacagtgccacgtcactgtcaaaaggttac
gccttttgcgaatacgtagacgtcagcgccactgatcaggcagttgctggactcaatggg
atgcaactgggagacaaaaagctgatcgtccaaagggcgagtgtgggagctaaaaatgcc
aatcctacctccatcatagagaccccggtgacgctgcaggtccctggacttcagaggctg
cagaactctggcatgcccacagaggtgctgtgccttctcaacatggtgatgcccgaggag
ctggtggacgacgaagactacgaggagatcctggaggacatccgcgaagagtgctgcaag
tacggcagtgtccgctctatcgagatcccccgacccgtcgatggcgtggaagtccccggc
tgtggaaaaatctttgtggagtacgtttccgctgcagactgtcagaaagccatgcaagct
ctcaccggccgcaagtttgccaacagagtggtggtcaccaaatactatgatccggacatg
tatcacagacacgagttttga

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