Larimichthys crocea (large yellow croaker): 104934016
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Entry
104934016 CDS
T04659
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04140
Autophagy - animal
lco04148
Efferocytosis
lco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104934016 (vps16)
04148 Efferocytosis
104934016 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104934016 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104934016 (vps16)
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104934016 (vps16)
Hops complex
104934016 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
104934016
NCBI-ProteinID:
XP_019125277
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MAFITATWNPLGEAFYRKSELYEMCWSIRDGLRDSLVAAAPYGGPIALLREPHRRSPSTR
PQLEIYSASGVSITSFPWKSGPVVQLGWTVSDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVVQNQVLEAKVFHSPYGTGVAIVTGSFRFTLATNIDDLKLRRLPEVPGLQGKPPCWVVL
TQDRQTKVLLSTGPELYILDNTSCTAVCPPGLSPQAGSVVHMSVSFSYKYLALFTDTGHL
WTGSSHLQEKLSEVDTKKSTPPKQMVWCRRPKSQQPSVVLMWDKLLMVAGVCNDTIQFPI
EDPCVLVGELDGVRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLLRAASFGKCFLTDFSPDPFVSTCR
ELRVLNAVRESSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLESRLSLLQSAVDEYNKAKNE
FAAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKCNNKYEAKKYVSKVTPEQK
VKAHLAISDLEGAADAAIERKNESEMGVVLSRCSVSDRLLIDRLNRARASAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccttcatcacagccacctggaacccgctgggagaagctttttaccggaagtccgag
ctgtatgaaatgtgttggagtatcagagatggactcagagacagtttggtggctgcagct
ccgtatggaggaccgatagctctcctcagagaacctcacagacgttctcccagtactcgt
cctcagttggagatttattctgcgtctggagtctccatcaccagcttcccttggaagagt
ggtcctgtggtccagttgggttggacagtcagtgatgagctgttgtgtgttcaggaggat
ggctcggttctgatctacgatctgttcggatcctttaagagacacttcagcatgggccag
gaagtggtccagaaccaggttcttgaagccaaagtgtttcactctccatatggaacaggt
gttgctatagtaactggctccttccgcttcaccttagcaaccaacatcgacgacctgaag
ctccggcggttacctgaagtcccaggtctgcaggggaagccgccctgctgggttgtcctc
actcaggacagacagaccaaagtcctcctgtccaccggacctgaactctacatcctggac
aacacgtcctgcactgctgtgtgtcctccaggtctcagtcctcaggctggcagtgttgtc
cacatgtccgtgtctttcagctataagtacctggctctctttactgacactggacacctt
tggacaggctcctcccacctccaggagaaactgagtgaagtcgacaccaagaagtcaacg
cctcccaaacagatggtctggtgtcgcagaccgaagagtcagcagccgtctgtggtgctg
atgtgggacaaactgcttatggtggctggagtctgtaatgacaccatccagttccccatc
gaggatccgtgtgttttggttggagagctcgatggagttcgtatcatcagctcgaccaat
caggagctgcttcaggaagttcctctggtctgtcaggacatcttcaagatcgcctccatg
gctcctggagctctgctgctggaggcccacagagagtacgagaagtcgagtcaaaaggca
gatgagtacctgagggagatcaaggagcaaagcatgctgggagaagcagtcagacagtgt
gtggaggcagcgggacacgaatatgacaccaacacccagaaatccctgctgagggcggcg
tcgtttgggaagtgtttcctgacggacttcagtcccgacccgttcgtgtcgacctgcaga
gaactcagagttctgaacgcggtcagagagagcagcgtggggctgccactgacacacact
caattcaaacagatgactctacaggtgctgatcgacaggttggtgtatcgacagttttat
ccgttagcgatagaaatctgtcgttacctgaagattccagattatcagggagtcagcaga
gtcctcaaacactgggcttcatgcaaggtgcagcagaaggacctatcagatgaagccata
gcccgagctgtgtgtgtgaaggtgggagactcacctggtgtgtcgtactcgcacattgca
gctaaagcgtatgaatgtggacgcactgagctcgccatcaagctgttggacttcgaggcc
cggtctggagaacaggttcctctgctgttgaagatgaagaggagtcagctggcactcagt
aaagctgtggagagtggagacactgacctagtttacactgtggtgacttacctgaagaac
gagatgaacagaggagatttcttcatgacgctgaggaaccagcctgtggcactgagcctt
tacagacagttctgtaaactgcaggaacaggaaactctgaaggatctttataaccaggat
gacgatcaccaagagctcgccaactactatgtgactgcgagttacagagaaaagaggtta
gagagccgtctgtctctcctgcagagtgcagtagatgaatacaacaaggcgaagaatgag
tttgctgcaaaggccacagaggacgagatgcgtctgcttcgtttccaacggaaactggat
gacgagaaaggcgcagggctactgggactgtccctacaggccaccatggaggctctgctg
gcgttaggactccacaaacaagcagaacagctttacagagacttcagagttccagacaaa
aggtattggtggttgaagctgaagtctctggcagaaaaggaggagtgggaggagctagag
aagttttcaaagagcaagaagtctcctattggctacctggcatttgttgaagtttgcatg
aagtgtaacaacaagtatgaagccaagaaatacgtttccaaggtgacgcctgagcagaag
gtcaaagctcacctggccatcagtgatctcgagggtgcggctgacgccgccatcgagcgc
aagaacgaatcagagatgggcgtggtcctgtccaggtgctccgtctccgatcgcttgttg
attgacaggttgaaccgagccagagcgtccgctgccaaaaagtga
DBGET
integrated database retrieval system
