Larimichthys crocea (large yellow croaker): 104934025
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Entry
104934025 CDS
T04659
Symbol
mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104934025 (mkrn1)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104934025 (mkrn1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104934025 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-ANAPC11
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104934025
NCBI-ProteinID:
XP_010747888
UniProt:
A0A6G0HR48
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAEAAVASTASSPVTGGWTKHVTCRYFMHGLCKEGDNCRYSHDLSSSKPAAMICKFFQKG
NCVFGDRCRFEHCKPTKNEELPTSQTLPLPSASLVGPSDPEPSGSTGAQDWVNAAEFVPG
QPYCGRAEPVKVESSGPLIEEFDSDAAPANKELRKQLCPYAAVGECRYGINCAYLHGDVC
DMCGLQVLHPTDNAQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKANPSE
RRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDDKQK
LIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAYPDGRLEEAQPQRRQTGSNSRNRNS
RRTPLWDIFDERESTDSFDNEDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFHEEL
DDFYEIYL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagtagcgtctacggcgagttcaccagtaacaggaggttggaccaaa
cacgtaacctgcagatacttcatgcatggtttgtgcaaggaaggagacaactgtcgatac
tcgcacgatctgagcagcagcaaaccagcagccatgatctgcaagttctttcagaaagga
aactgtgtgtttggagaccgctgcaggttcgagcactgtaaaccaacaaagaacgaagag
ttgccgacctcccagacgctgccgctgccctccgcctcgctggttggcccgtcagaccca
gaacccagtgggtcaacaggggcacaagactgggtcaatgctgcggagtttgttcccgga
cagccatactgtggacgagccgagccggtgaaggtggagagctccggccctctcattgag
gagtttgacagtgacgcagcaccggctaacaaagaattgaggaagcagctctgtccatac
gctgcggtcggagagtgccgctacggaatcaactgtgcctatctccacggtgatgtgtgt
gacatgtgcggcctccaagtgctccaccccactgacaacgcccagcgctctgagcacact
aaggcgtgcattgaggcccatgagaaagacatggagatttcatttgccatccagcgcagc
aaggacatgatgtgtggtgtgtgtatggaggtggtgtttgagaaggctaacccaagcgag
cgccgttttggcatcctctccaactgcagccactgctactgtctaaagtgcattcgcaag
tggaggagtgccaagcagtttgagagcaaaatcatcaagtcttgcccagagtgtcgaatc
acatccaactttgtcatcccaagcgagtactgggtggaagacaaggacgacaagcagaaa
ctcatccagaaatacaaggacggcatggggagtaaaccttgtcgatactttgacgagggc
cgtggaacgtgcccctttggctcaaattgtttctacaagcatgcctaccccgatggacgg
ctggaggaagctcagccccagcgaagacagaccggatccaacagcaggaaccggaactcg
aggcgaacaccgctgtgggacatctttgacgaacgggaaagcactgactcctttgacaac
gaggacgaggagatggtgacgttcgagctgagtgagatgctcctcatgctgctcgccgcg
gggaccgacgacgaggtgacagattcagaggacgagtgggacttgtttcacgaggagctg
gacgatttctatgagatttacctatag
DBGET
integrated database retrieval system
