Larimichthys crocea (large yellow croaker): 104934052
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Entry
104934052 CDS
T04659
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03271
Virion - Rotavirus
lco04145
Phagosome
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04514
Cell adhesion molecules
lco04530
Tight junction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
104934052
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104934052
04514 Cell adhesion molecules
104934052
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104934052
09144 Cellular community - eukaryotes
04510 Focal adhesion
104934052
04530 Tight junction
104934052
09142 Cell motility
04820 Cytoskeleton in muscle cells
104934052
04810 Regulation of actin cytoskeleton
104934052
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104934052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104934052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104934052
04515 Cell adhesion molecules [BR:
lco04515
]
104934052
04090 CD molecules [BR:
lco04090
]
104934052
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104934052
Exosome [BR:
lco04147
]
Exosomal proteins
Proteins found in most exosomes
104934052
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin beta subunits
104934052
CD molecules [BR:
lco04090
]
Proteins
104934052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104934052
NCBI-ProteinID:
XP_019122980
LinkDB
All DBs
Position
II:complement(2630075..2652208)
Genome browser
AA seq
796 aa
AA seq
DB search
MDLRLLLIAALSAVLGGSWAQQEGSICIKANAQSCGECIQVAKSCGWCSDQEFLTVGESK
SARCDDLDSLKKRSCTKIENPVGSISIDKDKPVTNRKKDSEKPDPGQITQIQPQKLTLTL
RTGEPQTFKLKFKRAEDYPIDLYYLMDLSYSMNDDLENVKNLGTDLMLEMRKITSDFRIG
FGSFVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLKLTNKGDEFNRLVSQQQISG
NLDSPEGGFDAIMQVAVCEEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHL
ENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSAN
SSNVIKLIIDAYNSLSSEVILENGRLPEGVSITYKSICKNGVEGTGENGRKCSNISIGDE
VSFEISVEFQKCPSHDKTETIKIKPLGFTEEVEVVLNFICDCQCAKDGENNSKQCDDGNG
TFECGACKCNEGRIGRLCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGSCECKKRE
NPAEVYSGKYCECDNFNCDRSGNKLCGGHGRCECRKCICDANYTGSACDCSLDTSYCLAK
NGQICNGRGTCECGVCKCNNAKFQGPTCEICPTCPGVCAEHKTCVQCRAFNAGEKKDTCE
RDCSYFELIKVKSRDKLPQPTDQSFPLTHCKERDANDCWFYYTFAIRNDTKEVYVVETLE
CPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPI
YKSAVTTVVNPKYEGK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcggttacttttaatagcggcgttatcggccgtcctcggtggcagctgggca
cagcaagaggggagcatatgcatcaaggcgaacgcacagtcatgtggggaatgcattcag
gtcgccaagtcgtgtggatggtgctcggatcaagaattcctcactgtcggtgagtccaag
tccgctcgctgtgatgacctggactccctgaagaagagaagttgtaccaaaatcgagaac
ccggtcggatcgatcagcatcgataaggacaagcccgtcaccaaccgcaagaaggacagc
gagaaaccggatcctggccagattacacagatccaaccccagaaactcaccctgacactc
agaactggtgagccccagacttttaagctgaaattcaagcgtgctgaggactaccccatc
gacctgtactaccttatggacctctcctactccatgaacgacgatttggaaaacgtcaag
aaccttggcactgacctcatgcttgaaatgagaaagatcacctcagatttcaggatcggt
ttcggctcgtttgtggagaagacggtcatgccgtacatcagcaccacgcctgccaggctc
atcaacccctgcacagggaaccagaactgtacgagccccttcagctataagaacgtcctg
aagctcacaaacaagggagacgagttcaatcgcttggtcagtcagcagcagatctcagga
aacctggactctccagagggaggcttcgatgccatcatgcaggtggcggtctgtgaggag
caaatcggttggaggaatgtgacccgtctgctggtgttttccaccgacgctggtttccac
tttgctggtgacggcaaactgggcggcatcgtcctgcctaacgatgggaagtgtcacctg
gagaacaacatgtacaccatgagccactactatgactacccctccatcgcccatttggtt
cagaaactgagtgaccacaacatccagaccatctttgctgtaactgaggaattccagcct
gtttacaaggagttgaaaaatctgattcccaaatcggccgttggcacgctgtccgccaac
tccagcaacgtgatcaaactcattattgacgcttacaactctttgtcatctgaggtcatc
ctggaaaacggcaggctgcccgaaggagtttccatcacctacaagtccatctgtaagaac
ggcgtggagggaacaggggagaacggcaggaagtgctccaacatctccatcggagacgag
gtgtctttcgagatttccgtcgaattccagaagtgtccgtcgcatgacaagaccgagacc
attaaaattaaacctctgggcttcactgaggaggtggaggtagttctgaacttcatctgc
gactgtcaatgcgccaaagacggcgagaacaacagtaagcagtgcgacgacggcaacggg
accttcgagtgtggagcctgcaagtgtaatgaaggacgtatcggacgcctctgtgagtgc
agcaaagacgaagtgcggacggaggacttggacgccaactgccgaaaagacaacggtacg
gacatctgcagcaacaacggcgactgtgtctgcggcagctgcgaatgcaagaagcgcgag
aaccccgcagaggtctacagcggcaagtactgcgagtgcgacaacttcaactgcgaccgt
tcaggcaacaagctctgcggaggacacggccgctgcgaatgcaggaagtgcatctgtgac
gccaactacaccggcagcgcctgcgactgctccctggacacttcctactgccttgccaag
aacgggcagatctgtaacggccgcggtacttgcgagtgcggagtctgcaaatgcaacaac
gccaaattccagggtccgacctgtgagatctgtcccacgtgccccggcgtctgcgctgag
cacaaaacttgtgtgcagtgccgagcgttcaatgccggtgagaagaaggatacatgtgag
cgggactgcagctacttcgagctgatcaaggtgaagagtcgtgacaagctgccacagccc
acggaccagagcttcccactcacccactgcaaagagcgtgacgccaacgactgctggttc
tactacaccttcgccatcaggaacgacaccaaggaggtctacgtggtggagacgttggag
tgcccagcgggacctgacatcatccccatcgtggcaggcgtggtagcgggcattgtgctg
atcggcctcgctctgctgcttatctggaaactgctcatgatcatccacgaccgcagagag
ttcgccaagttcgagaaggagaagatgaacgccaagtgggacacgggtgagaatccgatc
tacaaaagcgccgtaacaacagtcgtcaatccaaagtacgagggcaaatga
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integrated database retrieval system
