Larimichthys crocea (large yellow croaker): 104934062
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Entry
104934062 CDS
T04659
Name
(RefSeq) tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104934062
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Other domain-containing proteins
Tubby family proteins
104934062
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_ELP1_1st
WDR55
Motif
Other DBs
NCBI-GeneID:
104934062
NCBI-ProteinID:
XP_027130771
LinkDB
All DBs
Position
XXIV:complement(1829744..1842316)
Genome browser
AA seq
1824 aa
AA seq
DB search
MPRNYEPGHSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDST
ESDTDSDDSILPLVRRVKPLLTVTFLSGDISLMNNYDDLSPAVIRSGLKDVEAQWCSQGD
LLAVAGMERHGLPADSACASIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRL
FLACGPALYVVRVEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLCSYVTTAFIPTIK
PPIPDPNNIRDFVSYPTAGNERLHCTMKRAEDSPEAGGPCYTLYLEYLGGLVPILKGRRI
SKLRPEFVIMDPKTDSKAEEVCVNPMISYTDSCNCSDSSDIELSDEWVGKKSPKLSRGNR
MNMESRKSPKLSRANQEGQRSPRLPTKKPPVRSPSLTRREFSMDGITEHNYLAQVTSNIW
GTKFKIVGLASFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNPNVFS
EDEDDLPVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQLDVL
TNPTATAAAAAAAAAASVPVSDHGQDAVASPYPVPTRYSNPGQVIFNGLEMGPLLPGTLP
PPPPPHHLPPQPHPQRSHSQQPRQQQSKQSQQMQTQQQQQQQQQQQQQQKLLHHQQQQQQ
QQQHHLQTQAQQQQQQLQQQHQQLQQLHHQQALLQQQQQQHQHQVQQHQQMQQNQQHSPV
TPQQLQHQHQIQQQQQQMQLQHEQMQQQQQQMQQQQQQIRQQIQEMRQQQQQLQQQHQQI
QQQHQQMQRQHQQMQQQLKMQMSLPPPPTGYPTISLQQIHILPQIPPPTTEPGLGRGEHG
HTLKPSMPRTLPPFTDMDGSMEIQMRKVNPPPPYPGTVVSAAATAATTPQTLVTNCDSPS
VLAPDPCLKKDEFLLHPVTLQYPTPLGYERITTFDSSGNVEEVCRPRRRLIRNQNAYAVH
GSATLKVTSSENKKIQLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQVPATLPPPQRID
SSLIHATLRRDRRDVGLKVPQMMESSRTLPSRAKINSALALTYQQRVPTALYTCTQCSSN
SSSTSVSVSGGGTTSSGIAGGTVVRQDFPPGKGAHHSTIIVHSKGTSPLASQSSYSLLGA
VDNSRDRTVYVNSAFTEDETLSQQCHLEKSVRQLTLGDVSLTVKRPPPYQWDTSTTEEFW
LTPEQTMLAPPPGPHKQPPLIISQAQHLDMTRLPFVLTTKPPTSPSTSTLTFPSGYQISL
SPFPPGVGHSGPPLQTLQNPPPQCSPNEVVGSVPFAQQDPNLVLPPGYPPNLANLACCPL
PPMYPGASSCAGLQLHPVNLHPWNPYPCPPPMQDPPAPPLPTKTHQILEKPILSPPPPTA
PPPPPPLPPPPPPTELPPSKSATEDLAESANNFPEPSSLNESPVPQESERFNKKSRKRLD
SRAEEANMPTVSEGKSRKEGRALSDFNTLISSPRLGSREKKKPKGQREQLNKTKKMSRTT
NEFQDSSESEPELFISGDELMNQNQSSKKSWKNKRSMRMASELEEIKCRKANEREDRSLG
SQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYIL
DFQYPFSAVQAFAVALANVTQRLK
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaactatgagcctggtcactcagtagggatgttggctgctgtggaacatggt
cccatcctgtgcagcgactccaacatcctctgcctttcgtggaaaggccgggtccccaag
agcgaaaaagacaagccggtctgccggagacgctattatgaggagggctggctcgccaca
gggaacgggagaggagttgttggggtgacgtttacatctagtcactgcaggagggacaga
actacacctcagagaatcaattttaatctgcgaggacacaacagtgaggttgtgttggtg
cgttggaatgaaccctttcagaaactggccacctgtgatatggaaggaggtatttttgtg
tggatccagtatgaaggacgatggtctgtggagttagtgaacgacagaggagcccaggtc
agtgacttcacttggtcacacgatggcactcaggccctcatcgcgtaccgggatggcttc
gtgttggtcggctcggtcagcggtcaaagacactggtcctccgagattaacctggagagt
caaatcacctgtggcatctggacacccgatgatcaacaagtcttgtttggtacggcagac
ggtcaggtgatagtaatggactgtcacggacgaatgcttgcccatgttctcctacacgag
tctgatgggatcgtgagcatgtcttggaactgccctgatttcctggttgaggacagcaca
gagagcgacactgactccgatgacagtattctgcctttagtgcgcagagtcaaacctttg
ttgacagtcaccttcctatcaggagatatcagcttaatgaacaactatgatgacctctct
cctgctgttattcgctcagggctgaaagatgtcgaggcccagtggtgctcccagggagac
ctcctggctgtggccggcatggagagacacgggcttcctgccgactctgcctgcgcgtcc
atcatgaggaacgcccttgttaagttctataatgtccaaggagaacacatctacacgttg
gaaactccagcacagagacccatcaccaccatctgctggggtcacagagactctcgtctg
ttcctcgcatgtggaccggcgctgtatgtggtgcgtgtggagcacagggtggccagcctc
cagcttctatgccagcagggcatcgcaagcgccttgcgagaggagaaagatgtggggaag
ctgaacatgccctcgctgctctgctcttatgtcaccaccgctttcatacccaccatcaag
cccccaatccctgaccccaacaacatccgtgactttgtcagctatcccacagctgggaac
gagaggctgcactgcactatgaagcgagcagaggacagccctgaggcaggcggaccctgc
tacactctctacctggaatatttaggagggctggtacccattctcaaaggacgacgcatc
agtaaactacggccagagtttgtcatcatggatccaaaaacagacagcaaagcagaggag
gtgtgtgtgaatcccatgatttcatacactgacagctgcaactgctctgactccagtgac
attgagttaagcgatgagtgggtcgggaagaagtcaccgaagttatcccgaggaaacagg
atgaacatggaatcgagaaaatctcccaaactttcacgcgccaatcaggaaggccaacgg
tcgccacggttaccgacaaagaagcctccagttcgctctcccagtctgacacgtcgagag
ttttcaatggatgggatcacagagcacaactaccttgctcaagtcacatccaacatttgg
gggacaaaatttaaaatagttggactcgcctcttttctcccaaccaaccttggtgcagtc
atctacaagacaagtctgcttcatctgcaaccgagacagatgacgatctaccttccagaa
gtgcgaaagatttctcatgacttcatgagcctgccggtgttcaaccccaatgtgttcagt
gaggacgaggacgatttaccagtgatggggccatccggagtggcaggagacaatcctccc
tgcacagtcaacattcccatcgctcccatccacagcccagctcaggccatgtctccaact
cagagcatcggcctggttcagtctcttctggccaatcagaatattcagctcgatgtcctg
accaaccccacggcgactgcagcagctgcagctgcggcggcggcggcatccgtccctgtt
agcgatcatgggcaggatgcagttgcatcaccgtacccagtgccaactagatactcaaac
cccggccaggtgatcttcaacggactggagatgggtcctcttcttcctggtactcttcct
ccaccgcctccacctcaccatctcccaccgcagcctcacccgcagaggtctcattcacag
cagcctcgccaacagcagtccaaacagtcgcaacaaatgcagacgcaacagcagcagcaa
cagcagcagcaacaacagcagcagcagaaactgcttcatcatcaacaacaacagcagcag
cagcaacaacaccaccttcagacccaagcacaacagcaacaacagcaattacagcaacaa
catcaacagctacagcaactgcaccaccagcaggcgctactccaacagcagcagcaacaa
catcaacaccaggttcagcaacaccaacaaatgcaacaaaaccaacagcactccccggtg
acaccccaacaacttcagcaccaacatcagatccagcagcagcagcagcagatgcagctg
cagcacgaacagatgcagcaacagcagcagcagatgcaacagcagcagcagcagatccgg
caacagatccaggagatgaggcagcagcagcagcagctccagcagcagcaccagcagatc
cagcagcagcatcaacagatgcagaggcagcaccaacaaatgcagcagcagctgaagatg
cagatgtcgctgccgcctcctccgaccggctatccgaccatttcattacaacagattcat
attctgcctcagattcctcctcctaccaccgagccggggctcggcaggggcgagcatgga
cacactcttaagccgagtatgccaaggactttacctcccttcactgacatggatggatct
atggagatccagatgaggaaggttaatcctcctcctccatacccgggcaccgtagtttct
gcagcggccacagctgccactacgcctcaaactcttgtcacaaactgcgacagcccaagt
gttctggcaccagacccctgcctcaagaaggatgagtttttgcttcaccctgtcacctta
cagtacccaacacctctggggtatgaaaggatcacaacctttgacagcagtggcaacgtg
gaggaggtttgtcggccacgcaggcgactcattcgcaaccaaaatgcgtatgcggtccac
ggttcggccacgctgaaagtcacttcttctgagaataaaaagattcagcttccctacagc
tcggcaacactgagccgtctctctgtcccacgctactcaatacctagcggagacccccct
ccttaccctgatccagccaatcaagtacctgctacacttcctcctcctcagagaattgac
agcagcctgatccacgccactctacgccgtgaccgcagagacgtgggacttaaagtgcca
cagatgatggaaagctcaaggacccttccctccagggctaaaataaacagtgcacttgca
ctcacctaccagcagagggtgcccactgcgttgtacacatgcacacagtgcagcagcaac
agcagtagcaccagtgtcagcgtcagcggtggtggaaccacaagtagtggcatcgcaggt
ggcacggtggtgaggcaggacttcccaccagggaaaggagcgcatcacagcaccatcatc
gtgcactctaaaggcacctctcctctggcctctcagtcatcctacagtctgctgggtgct
gttgacaacagcagggacaggacagtgtacgttaactctgctttcaccgaagacgagact
ttaagtcagcagtgtcaccttgaaaagtctgtacgtcagctgactctcggggatgtcagt
ttaacagtcaaacgccctccgccttaccagtgggacacctcgaccacagaggagttctgg
ctcaccccggaacaaacaatgttggctcctccgccaggacctcataaacagcctccactc
atcatcagtcaagctcagcacttggacatgacgcgactaccctttgtcctcacgactaaa
cctccaacaagtccgagcacgagcactcttactttcccgtcaggttaccagatatccctg
tcaccttttcctccaggtgtaggtcacagtggtcctccacttcagaccttacagaaccct
ccaccacagtgctctccaaatgaagtggttggttcagttccttttgctcagcaggatccc
aacttggtcttgccaccgggctatcctccaaacctggctaacttggcctgctgccctctc
cctccaatgtatccaggagccagctcatgtgccggacttcagctgcaccctgtcaacctc
cacccgtggaatccttacccttgcccgcctcccatgcaagaccctccagcacctcccctc
ccaaccaaaacccatcagattttagagaagccgattctctcccctcctcctcccacagca
ccgcctccaccacctcctctcccgcctcctcctccacctactgagctaccgccatctaaa
agtgccacagaggatctagcagagtcggccaacaactttccagagccatcatctctgaat
gaaagccccgtgccgcaggagtccgagcgcttcaacaagaagagccgcaaaagactggac
agcagagccgaggaggccaacatgcccaccgtctccgagggcaagtccaggaaggaagga
cgtgcgctctctgacttcaacactctcatttccagcccaaggctcgggagcagagagaag
aagaagcccaagggtcagagagagcaactcaacaaaaccaagaagatgagcaggaccaca
aacgagttccaggatagctcagagagcgagccggagctgtttatcagcggcgacgagctc
atgaaccagaaccagagtagtaagaagagctggaagaacaagcgcagcatgcgtatggcg
agtgagctggaggagataaagtgccgcaaggcgaatgagagagaggatcgtagtttggga
agtcaaggatttgtctacgtcatggccaataaacaaccattgtggaacgaagccacccag
gtctaccagcttgattttggaggacgagtcacgcaggagtcagcaaagaatttccaaatc
gagctggatggtagacaggtgatgcagtttggacgaattgacgggaatgcctatatcttg
gatttccagtatcctttctcagcagtgcaggcatttgctgttgccttggccaacgtgact
caaaggctgaagtga
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integrated database retrieval system
