Larimichthys crocea (large yellow croaker): 104934123
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Entry
104934123 CDS
T04659
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03272
Virion - Hepatitis viruses
lco04145
Phagosome
lco04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104934123 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104934123 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
104934123 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104934123 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104934123 (scarb1)
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Scavenger receptors
104934123 (scarb1)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104934123 (scarb1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
104934123
NCBI-ProteinID:
XP_027137943
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Position
IX:13214799..13250889
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AA seq
492 aa
AA seq
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MGISKAHVAVGFIVAGSLTVLFGAVLLFVGPAVINKEIIKNTVIDPQNNVSYTMWKDVPV
PFFMSVYFFNILNPKEILKGEKPMVEQRGPYVYRKQIQKDNITFHDNDTVSYREYRKYFF
EPSMSVGNESDVVMIPNMLVLGAAVMMEKLPYAVRLMISSTFKAFNEGPFLNKTVGELMW
GYDSKLVDFLNKYLPGMLPSSGKFGLFAEFNNSNTGLFTIFTGKDDIRNVHKVDSWNGLT
ELTYWRTPQCNMINGTAGQMWPPFMTKETTLPFYSPDACRSLELVYQRSGELKGIPLYRY
VAPKTMFANGTDYAPNEGFCPCRQSGLLNVSSCRHNSPCFISHPHFFNADPVLLDYVQGL
HPTEDEHGLFIDIHPLTGVPLNVSIRLQLNLYMKKVSGITETGKISEVVMPMIWFEESGY
IDGPILTTFHTNLVVLPAIMEYMQYGFIALGLATIVIATLVYRRVKATDKEPVNGSHEHE
RKEKYIVNNSEN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcagtaaagctcacgtggctgttggattcatagtggcaggctctctcacggtg
ctgttcggagcggttctgctgttcgttggaccggcggtgataaacaaggaaatcattaag
aacacagtgatcgacccgcagaacaacgtatcgtacaccatgtggaaggacgtccccgtg
ccgttcttcatgtccgtctacttcttcaacatcctcaaccccaaagagattctgaaagga
gagaagcccatggtggagcagagaggcccgtatgtttacagaaaacagatccagaaagac
aacatcacgtttcacgacaacgacacggtgtcctacagagagtacagaaaatatttcttc
gagccgtccatgtctgtcggcaatgagtccgacgtggtcatgattccaaacatgttggtg
ctgggtgcagcggtgatgatggagaagttgccctacgctgtgcgtttgatgatcagctcc
accttcaaggctttcaacgaggggcccttcctgaacaagacagtcggggagctgatgtgg
ggttacgacagcaaactggtggatttcctcaataaatacctgccgggcatgctgccgtcg
tcggggaagtttggcctttttgctgaattcaacaactccaacaccggcctgttcaccatc
ttcacggggaaagacgacatcaggaacgtgcacaaagtcgactcgtggaacggcctgacg
gagctgacctactggcggactcctcagtgtaacatgatcaacggcacggccggacagatg
tggcctcccttcatgaccaaagagaccacgttacctttctacagccccgacgcctgcaga
tctttggagctggtttatcagcgctccggcgagttgaaggggatacctctttatcgatat
gttgcacctaaaaccatgtttgccaatgggacggactacgcccccaacgaaggcttctgc
ccctgcaggcagtccgggctgctgaatgtcagcagctgccgccacaactctccgtgcttc
atctctcatcctcacttctttaatgctgatccggtgctgctggactacgtgcagggcctt
cacccaaccgaggacgagcacggcctcttcatagacattcatccactcacaggcgtcccg
ctgaacgtgtccatccgcctgcagctcaacctctacatgaagaaagtgtcggggattaca
gaaactggcaagatttctgaggtggtgatgccgatgatctggtttgaggagagtggctac
atcgacggccccatcctcactacgtttcacacgaacctggttgttcttccggccatcatg
gagtacatgcagtacggcttcatcgccctcggcctggcgacgatcgtaatcgccaccctc
gtgtatcgcagagtgaaggccaccgataaagagccggtaaacgggtcacatgagcatgaa
agaaaggagaaatatatcgtgaataattcagagaactaa
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