Larimichthys crocea (large yellow croaker): 104934194
Help
Entry
104934194 CDS
T04659
Name
(RefSeq) nuclear receptor ROR-alpha isoform X3
KO
K08532
RAR-related orphan receptor alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104934194
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lco03310
]
104934194
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104934194
Nuclear receptors [BR:
lco03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
104934194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104934194
NCBI-ProteinID:
XP_019112625
LinkDB
All DBs
Position
XXIII:21263992..21338229
Genome browser
AA seq
492 aa
AA seq
DB search
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDILYAEVQKHRLQQQQQQQQGPL
ILSHPSIGSPSPGESEPLSPHYCLSSRGLTELPDELGGYMEQNSPEGGSVSSKADSGGGG
GGGGGGGGFYLDFQPSPDQSGLDINGIKPEPLCDYGSSNDFFPYCSFSNGDTSPTVSMAE
LDHQAQIISKSHLETCQYLREELQHLSWQNFLQDEVENYQSKPREVMWQLCAVKITEAIQ
YVVEFAKRIDGFMDLCQNDQIVLLKAGSLEVVFVRMCRVFDSQNNTVYFDGKFAGPDVFK
ALGCDDLITSVFDFAKSMCSLHLSEDELALFSAFVLLSADRSWLQEKLQVEKLQQKTQLA
LQHVLQKNQREDGLLNKLRCKVSALRSLCSRHTEKLCAFRAVYPDVVGSDFPPLYKELFG
ADLELTLRSDGD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttctgcaatgaaagctcagattgaaatcattccctgtaagatctgt
ggagataaatcatctgggatccactacggcgtgatcacctgtgagggctgtaagggtttc
ttcaggcggagtcagcagagtaacgccgcctactcgtgtcctcgccagaaaaactgtctg
atcgaccgaacgagccgcaaccgctgccaacactgccgtctgcagaaatgtctggccgtg
ggcatgtcccgagacgctgtgaagttcggtcgcatgtccaagaagcagcgcgacattttg
tacgccgaggtgcagaagcaccgcctccagcagcagcagcagcagcagcagggcccactc
atcctgtcccaccccagcattggcagcccaagcccgggcgagtctgagccgctgtcccct
cactactgcctctcctccaggggcctcacggagctgcccgatgagttgggaggctacatg
gaacaaaactcacctgaaggaggatcagtatcatccaaggcagactctggaggaggagga
ggaggaggaggaggaggaggtgggttctatctggacttccagccatcgccggaccagtca
gggctcgatattaacggcatcaaaccagagccgctgtgtgactacggctccagtaacgac
ttcttcccgtactgctccttcagcaacggagacacgtcacccacagtgtccatggctgaa
cttgatcatcaggctcagatcatctcaaagtctcacctggagacgtgtcagtacctgagg
gaggagctgcagcacctgagctggcagaacttcctgcaggacgaggtggagaactaccag
agcaagccgcgggaggtgatgtggcagctctgtgccgtaaagatcaccgaggccatccag
tacgtggtggagtttgccaaacgcatcgacggcttcatggatctctgtcaaaacgaccag
attgtgctgctgaaagccggatctctggaggtcgtcttcgtccgaatgtgtcgcgtgttc
gactctcagaataacaccgtctacttcgatgggaagtttgctggtcctgacgtcttcaaa
gcattaggctgtgatgacttgatcacgtcagtgttcgacttcgctaaaagcatgtgttct
ctgcacctgtcggaggacgagctcgctctcttctcagcgttcgttctgctgtctgcagac
cggtcgtggctgcaggagaagctgcaggtggagaagctgcagcagaaaactcagctggct
ctgcaacacgtcctgcagaagaaccagagagaggacggactgctcaacaagctcagatgt
aaggtgtcagcgctgcgttccctgtgctcccgtcacacggagaagctgtgtgcgttccgg
gccgtgtacccggacgtggtgggttctgacttccctcctctttataaggagttgtttggc
gctgaccttgaactgactctgcggagcgacggcgactaa
DBGET
integrated database retrieval system
