Larimichthys crocea (large yellow croaker): 104934197
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Entry
104934197 CDS
T04659
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104934197
04090 CD molecules [BR:
lco04090
]
104934197
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104934197
CD molecules [BR:
lco04090
]
Proteins
104934197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
DUF1218
Motif
Other DBs
NCBI-GeneID:
104934197
NCBI-ProteinID:
XP_010748104
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Position
X:complement(6586577..6609880)
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AA seq
905 aa
AA seq
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MLWTKWLVLLLCWGATGGEQQADDRERDGFPADVRADSRTQRSPPPVEPLDFGFVPAAVY
DTHAYYEPGAVGILFHMVHAFLYVVQPNTFPKDLIVKVIQQNMGGIKIEEWRKPENVVLL
LQWIYYEAGFLICSTIGIMVVILTPIIGICFCMCRCCENCGGEMHQRQRKNADCQRGFYT
ASLIATSIFIIVGVLIAYAANHNVSAQIKSTRRFINTNMRDLKTFANNTPAQIEYLTAQY
TTAKNKVLSELDNIGPLLGGRIQSQLEKEVVPSLDTALRMAGGKVENAIKAMRETKEALE
NISSSLEVLQEGTGKLQANLAAERASLSNTLSDPACTNGAVSHTCNTIRSTLSQLGINAD
FSKLHDVNHALDNVNTVLRTDLSNIVQKGYSSFNDTPRLVKEQTKNIVTALPRVKGMLDK
IGTEINGFSKMFPVEASLANFTIFLNQGQKKMESYYPQIDQMDFYRWIGCVTALCIVILV
LAFNILGLMCGTCGYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFSWVLMGIVTALFLVG
GNVEKLVCEPLANRQLFKIIDTPFLVHPAKKNFLPGMLFQNPNIDLTLGSMYRECYENNG
LYHALQLEAMFNINSFLNKTVYNNDLAKVLESVNVDLQGITLLEQAGRDNLINFANTGVG
QINFEAYLTEVNKGVTLVDLLSFSTDLEAEADQLPRGALENALKGHASSIRQIHREQVVA
MEQAMSTLSQSVKQLQRMSTDLPVKVTNILSAIDAAEYLITHNASHVVKQETKAYSQSLV
GYFKQYTDWVRNSLTAEVAQCKPISNIVDSMEIVGCSFIIDSVNTFWFGLGGCCILLIPS
MIFSVKLAKYYRRMDTEDVFEDVGSTDNHGEMVCDIHGDLAVVSSPYDTLTLFPRASAPP
SYTDW
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggacaaagtggctggtcctgcttctctgctggggggcgacaggcggcgagcag
caggcggatgacagggagagggacgggttcccggctgatgtccgggcggactcccgcaca
cagcggtctcctccaccggtggagccgttggattttgggtttgtaccggcggcggtttat
gatacccacgcctactacgagccaggggctgtggggatcctcttccacatggtccatgct
tttctctacgttgttcagccgaacacatttcccaaagatctgattgttaaagttattcaa
cagaacatggggggaatcaaaatagaagaatggagaaagccagaaaatgtggtgctgtta
ttacagtggatctactacgaggcgggcttcctcatatgttcgaccatcggtatcatggtc
gtgatcctcacacccatcataggcatatgtttctgtatgtgtcgatgctgtgagaactgc
ggaggggagatgcaccagagacagagaaagaacgcagactgtcagagaggtttctacacc
gcctcgctcatcgccacctctatcttcatcatagtgggagtattaattgcctatgctgcg
aatcataatgttagcgcccagattaagagcacgcggcggttcatcaacaccaatatgaga
gacttgaagacatttgccaataacactcctgcgcaaattgaatacctgacagcccagtac
accacagcaaagaacaaagtcctgtcagaactcgacaacattggacctttgctgggtgga
cggatccagagtcagctagagaaagaggtggtcccttcactggacactgcgctgcgtatg
gcaggagggaaagttgagaatgcaatcaaagccatgcgggagaccaaagaagccctagag
aacatcagctcctccttggaggttcttcaggagggaacggggaaacttcaggctaatcta
gcggcggagcgtgcctctctgtccaacaccctgtcagaccctgcctgcactaatggagct
gtgtctcacacatgtaacaccatccgctccacgctatcccagctgggaatcaacgctgac
ttctccaagctccatgatgtcaatcatgctttggacaatgtcaatactgtcctgagaaca
gacctcagcaatatagtacaaaagggttactcatcctttaacgacacaccgagattagtc
aaagaacaaaccaaaaacattgtcacagctctacctcgagtgaaaggcatgctggataag
attggcacagagatcaacggcttttccaaaatgttcccagtggaagcttctctggccaat
ttcaccattttcctcaaccaaggacagaaaaaaatggagtcttattacccgcagatagac
caaatggatttctacaggtggatcggctgtgtcacagcgctctgcatagtcatcctggtc
ctggccttcaacatcctaggactcatgtgcgggacctgtggctacgataagcaagctaca
ccaacaacccgaggctgcctatcaaacaccggaggcaacctgttaatggccggggtggga
ttctctttcatcttttcctgggtgctgatgggaatcgtaactgccttgtttcttgtcggt
ggcaatgtggagaagctggtgtgtgaaccgcttgcaaacagacagctgttcaagatcata
gacacaccattcctggttcatcctgccaagaagaacttccttcctgggatgctgtttcag
aatccgaacattgacttgactttgggaagcatgtacagggagtgctatgagaacaacggt
ctgtaccatgctctgcagctggaggccatgttcaacatcaactccttcctcaacaaaact
gtgtacaacaacgatctggccaaagtgcttgagagcgtgaacgtcgacctccagggcatc
acactgctggagcaggccggcagagacaacctcattaacttcgccaatacaggagtggga
cagatcaattttgaagcctacctgactgaggtaaataagggagtcactctcgtggatctc
ctgtcattctctactgacctggaggctgaggccgaccaactgccacgtggtgctctggag
aatgcactgaaaggacacgccagcagtatcagacagattcacagagaacaggtggttgcc
atggagcaagcaatgagtaccctgagccagagtgtcaagcaactgcagaggatgtccacc
gatctgccggtcaaggtcacgaacatcctgagtgctatcgatgcagcagagtacctcatc
actcataacgcctctcatgtggtgaaacaggaaacaaaagcctacagccagagcttggtg
ggatacttcaaacagtacacagattgggttagaaactcgttgactgcagaggttgcccag
tgtaaacccatcagtaacatcgtggacagcatggaaatagtaggatgcagcttcataatc
gattcagtgaacacattctggttcggtctgggaggctgctgcatccttctgatccccagt
atgatcttctctgtcaaactggccaagtattacagaaggatggacacagaggacgtcttt
gaagatgtgggtagtacagataatcatggtgaaatggtgtgtgatatccacggagacctc
gccgtggtcagctctccctatgacactctgaccctgttccctcgggcctctgcacccccg
agctacaccgactggtga
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