Larimichthys crocea (large yellow croaker): 104934339
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Entry
104934339 CDS
T04659
Name
(RefSeq) protoheme IX farnesyltransferase, mitochondrial
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00190
Oxidative phosphorylation
lco00860
Porphyrin metabolism
lco01100
Metabolic pathways
lco01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
104934339
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
104934339
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lco01006
]
104934339
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lco03029
]
104934339
Enzymes [BR:
lco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
104934339
Prenyltransferases [BR:
lco01006
]
Compound prenylation
Protoheme farnesyltransferase
104934339
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
104934339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
104934339
NCBI-ProteinID:
XP_010748278
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Position
XVI:complement(20727959..20758806)
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AA seq
468 aa
AA seq
DB search
MFKTPCSRLSGLIGVSVKRKLVQNVPRCNQSARSLIQLYRRDPTNWLTYQHLNFLKRQYV
TKNKSELHQRAVPEQAPALTILDEREDHVERQVQRISTIDPVVSQPEDVTSKAQAEISDS
KPTAEDVAAQNASVSSAVSKRDETPYVHVESEEAKEARLDRQWKEIKVNVTDLPDIYARL
AKVKLTALVVTTAAAGFAMAPVPFDPLLFFVSCLGTGLASCTANSINQYFEVPFDSNMNR
TKNRPLVRGQISPLHAVSFALACGVPGVALLTLAVNPLTGFLGALNIFLYTCCYTPLKRL
SISNTWVGAIVGAIPPVMGWTAATGCLEPGALLLGGLLYSWQFPHFNALSWNLKEDYSRG
GYRMMSVTHPGMCQRVALRHSVGLIGLSALAPVLDVTTWTFPLISLPINLYISYLAFRFY
HKGDRNNARKLFFCSLWHLPMLLLLALTCKKPRRDPEDAALPSASSAS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaccccatgcagcagactgtcaggtttgattggtgtgagcgtgaaaaggaaa
ttggttcaaaatgttcctcggtgtaatcagagcgctcgcagcctcattcagctgtaccga
agagacccgacaaactggctgacgtatcagcatctcaacttcctgaaacgccagtatgta
acaaagaacaaaagtgagcttcaccaacgtgccgtcccggaacaggctccagccctgacc
atcttggacgagagagaagaccacgttgagagacaagtgcagagaatatcaactatcgat
cccgtggtttcgcagccagaggatgtcaccagtaaagcacaggctgaaatatctgactcg
aagcccacggcggaagatgtggcggcgcagaatgcttctgtgtccagcgcggtttcgaaa
cgagacgagaccccctacgtgcatgtagagtcggaagaggcgaaggaggcacgtctagac
agacagtggaaggagataaaggttaacgtgactgatctgccagatatctatgccaggctt
gccaaagtcaaactcacagcactggtggtcacaactgcagcggctggctttgcgatggct
ccagtgccctttgaccctctactcttcttcgtgtcttgcctcggaacgggcctcgcctcc
tgtaccgccaattcaatcaaccagtacttcgaggtgcccttcgactccaacatgaaccgc
acgaagaaccgtccgctcgtcagaggacaaatcagtcccctccacgccgtgtcctttgct
ctcgcctgcggagttcccggagtcgccctgctcacgctggcggtaaaccccttgacgggc
ttcctcggcgccctcaacatcttcctctacacttgctgctacacaccgctcaagaggctc
agcatcagcaacacctgggtgggagcaatcgtgggcgccatacctcccgtcatgggctgg
acggcggctacaggttgtctggagccaggtgccttgttgctgggtggcttgctgtacagc
tggcagttccctcacttcaacgcgctcagctggaacttaaaggaagactactcccgcggc
ggctaccgcatgatgtccgtcacccaccccggcatgtgccagcgggttgccctgcgccac
agcgtgggcctgatcggcctgtcggccttagcgccggtgctggacgtcaccacctggacg
ttcccgctcatctcccttcccatcaacctgtacatcagctacctggccttccgcttctac
cacaagggagaccgcaacaacgcccgcaagctgttcttctgcagcctgtggcacctgccc
atgctgctgctgctggcgctcacctgcaagaagcctcgcagagatcccgaggacgcggct
ctaccttcagcttcttcggcttcatag
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