Larimichthys crocea (large yellow croaker): 104934347
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Entry
104934347 CDS
T04659
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104934347 (zc3h12b)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104934347 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
104934347
NCBI-ProteinID:
XP_010748298
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Position
XXII:16893131..16909428
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AA seq
848 aa
AA seq
DB search
MTVWSMVEKLKMEKRPWREENIDSSEAQHATDDSEDGSSSESESEEQQCQRVQVNNSRCK
KREPLAVTKPHRQLCRSPCLDRPSFSQSSTVQDFREDESSAGPGIKTASDRDYQTKMDFA
LKLGYSGEQVETVLNKLGAAALINDILAELVRLGNKVEPEIQPCSSTTITSISRSSCVKE
TVSPEVSLEDDSVDTFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDIT
VFVPAWRKEQSRPDALITDQEILRKLEKEKVLVFTPSRRVQGRRVVCYDDRFIVKLAYDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPVTIKGDSNSEAKRVAPKRQSDPSIRSVACEPPEALSVVRKSETNSVPSLVSALSV
PTMQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTYSEQ
FPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNS
DSFSSYGDLYPSSVDSSLEESMKGQQQSPAQGRLQTFSHGFRHEALTRVQSYGPEEPKQG
PRKQSGSHLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLY
DSNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQI
WNSPWEMPGSAAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVI
VTKLRSCH
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggtcaatggtggagaagctcaaaatggaaaaacgcccatggagggaggag
aacattgactcaagcgaggcccagcatgccactgacgattcagaggatggaagcagctct
gagagcgaatcggaagagcagcagtgccagagggttcaggtgaacaacagcaggtgtaag
aagagggagcccttggctgtcacgaaaccccaccgacagctctgtcgctctccatgcctt
gaccgccccagtttttcacagagtagcactgtgcaagattttcgtgaggatgagagcagc
gcgggaccagggatcaagactgccagtgacagggattatcagacgaagatggattttgct
ttgaagttgggctactctggagagcaggtggagacggtgctcaacaagttgggggcagca
gcacttattaacgacattctcgccgagttggtaaggctcggaaacaaagttgagcctgag
attcaaccttgcagcagtacgaccatcacatcgatatcacgctcctcctgtgttaaagag
actgttagcccagaggtgtcattggaggacgactctgtggatacctttgataacctcagg
cccatcgtcattgatggctcaaatgtggcaatgagccatggaaacaaggaggtgttctcg
tgccgcggcatccaacttgctgttgagtggttcttggagaaaggacacaaagacatcact
gtgtttgtcccagcctggagaaaggaacagtcgaggcctgatgccctcatcacagatcaa
gaaatcttacgcaagctggaaaaagaaaaggtcctggttttcaccccatctcggagagtc
caaggcaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattct
gatggaattattgtgtcaaatgacaactacagagacttgcaaaacgagaagccagagtgg
aagaagttcatagaagagcgtctcctaatgtattcatttgtcaatgacaagtttatgccg
cctgatgatccactgggaagacatggtccaagcttagaaaatttcctccgcaagcgtcct
gttgttccagagcacaaaaaacaaccctgcccttatggaaaaaagtgcacatatggacat
aagtgcaaatactatcacccggagcgcgtcaaccagccacagcgatcggtggctgatgaa
ctgcgggccttcgccaaactgtctgcggtaaagacgatgagtgagggggctttggctaaa
tgtggtacaggtccagtaaccataaagggggacagcaactctgaggccaaacgagtggcg
cccaaacgtcagtctgaccccagtattcgttcagtggcctgtgaacctccagaggcactg
tccgtcgtgaggaagtctgagacaaattcagtgccttcccttgtgtctgctctcagtgtg
cccaccatgcagcctgccaagagccacgcagctggggccttgaacacacgatcagccagc
agcccagtgccaggatctttgcagttcgcgcacagttccctggagcacatgtccagtgta
cagtaccctcctattttagttactaatagtcatggcgcctctgttacatacagtgaacag
ttcccgaagtatgactcagttagcgaccatggatattattcactgcacagtgatttttca
aatatgagcatgagcagcatgcataatgtcgacagtttctgtagcatggagcacgagcat
ggtgtgtatcagagaaatcccagccactgccctgaatcctgcctcagccattcaaacagt
gactcgttctcctcctatggggatctgtacccaagctctgtggacagtagcttagaggag
agcatgaaggggcagcagcagtctcctgcacaaggtaggctgcaaactttctcccatggg
tttcgtcatgaagcactgactagggtgcagagttacggaccggaagaacccaagcagggc
ccccgtaagcagtctggatctcatctagcaccacacatccagcacgttgcagtgggagcc
agatccagctgccctggagactatcccctaactcagaatgtcctcccacctttgtcctca
cagcccacacggtcactaggtatgactcgtatggacagcatatcagattcaaggctatat
gatagcaacccgatgagacagaggcgacctccactgtgccgtgagcagcatgcaagctgg
gaccctcttccctgtggtaatgagtcctatgggtatcattcgtatccactgagcaacagc
ctgatgccatgttgcgagagggtgatggtccgcagcatgccagacaaaatggaacaaatc
tggaactcaccgtgggagatgccaggatctgcagctgaacaccaagagcggtacgtcatc
ccagaccaccagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtc
cactcagtgatggagaagaacccacatctgacagatccacaacaactcgccgctgtcatt
gttacaaaactgaggtcatgccattga
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