Larimichthys crocea (large yellow croaker): 104934416
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Entry
104934416 CDS
T04659
Name
(RefSeq) lissencephaly-1 homolog B
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00565
Ether lipid metabolism
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
104934416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104934416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104934416
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104934416
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104934416
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_DCAF4
LisH
LisH_PAC1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_HPS5
Beta-prop_WDR11_2nd
ARMC9_LisH
SutA-RBD
LisH_2
DUF2570
LisH_WDR26
Motif
Other DBs
NCBI-GeneID:
104934416
NCBI-ProteinID:
XP_010748376
UniProt:
A0A0F8BU73
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Position
XXII:606576..619390
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AA seq
410 aa
AA seq
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MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGSVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDICFDQTGKLLASCSADMSIKLWDFQ
GFECVRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaaagagatgaactaaaccgggccatagccgattatctccgt
tccaatggatacgaggaggcctattccacctttaagaaagaggcagagttagacatgaat
gaagaggtagataaaaagtatgcaggccttttggaaaagaaatggacctcagtcatcaga
ttacagaagaaggtgatggagctggagtcgaagttgaacgaggcgaaggaggagatgaca
cacggaggatccgtgggtcagaagagggaccccaaggagtggatcccccgtcccccagag
cgatacgccctgagcgggcaccgcgcccccgtcacgcgggtcatattccaccctgtgttc
tctgtcatggtcacagcctctgaggatgctaccatcaaggtgtgggactacgaggcaggg
gactttgagcggaccctgaagggccacacagactcagtgcaggacatctgttttgaccag
acaggaaagctgctggcttcatgttcagctgacatgagcatcaaactttgggactttcag
gggttcgagtgcgtccgaacaatgcatggccacgatcacaatgtgtcgtctgtagccatc
atgccaaatggtgaccacatagtgtctgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaagacatttacaggccacagggagtgggtgaggatggtg
cgtcccaaccaggacggctcgttgattgccagttgctccaatgaccagacggtgcgtgtc
tgggtggtcgcctcgaaggagtgcaaagctgagctgcgggagcacgaacacgtggtcgag
tgtatcgcctgggccccagacagcgctcaccccaccatcctggaggccacaggctcagag
agcaagaagagtggaaagcccggccccttcctcctctccggatccagagataaaacaatt
aagatgtgggacgtcagcatcggcatctgccttatgactctggtgggacatgacaactgg
gtgcgtggggtgttggttcatcctggaggaagattcatagtgagctgcgctgatgacaaa
actctaaggatctgggactacaagaacaaacgctgcatgaagaccctgtgtgcccatgaa
cactttgttacctctctggatttccacaagactgctccctacgtggtgacgggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga
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