Larimichthys crocea (large yellow croaker): 104934426
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Entry
104934426 CDS
T04659
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lco03012
]
104934426
Translation factors [BR:
lco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104934426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
TPR_NPHP3
GSKIP_dom
Motif
Other DBs
NCBI-GeneID:
104934426
NCBI-ProteinID:
XP_019128412
LinkDB
All DBs
Position
XXII:588009..606362
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AA seq
1699 aa
AA seq
DB search
MGNIVQCCHTLTNYFKCKDALGQGGPERSPLLSSDESECDSPSLQDDLEDDLLTVSTSVS
NPTLEPENFLYPDIILSSNLGGDVTLVEPMVCLLVSEEEEEVRLDEWGDGQERSNRGANR
GFSEVETQIGIGVQTQTESQAEVQAQMKILVCHNETVGRQENTLTNTGATDKMVVDVWEE
HEILKQVDVLLEAPTSQEGHSEAVTGMASEKQQKATDSGNWSDIDSFVDLEVPEKTERQT
EKNKLAFKDIHKDTEQKETHIHEGLTSSFAKHAFKTKRNTEFMEEINTDEENVFELHHTL
PTQENAEGRERKFESGCTSVTLSEHILNNIYENIAPVKSQKNMEPTKYNIINTEIVEECG
VHLTRQSDEANEQTGQLTVETDLNIKEKVINTTSNIHLPEEHADQTAGQSSDHGQENMKR
EEDDNKTGLQRVVEEVEGGAEIMLFSVDRLFLAAPHVKALPSPIEESPEDDRPEQSDVDK
RKQLTIRDIVDLQETGFTVRIQSPGAESFELQVSGQLLVAELHQVLMEHKITCHRTCFSL
QLGGTALDSLTELCSIDGIQDGALIKVVEDSYSVRDARLHLRHVRDLLRSLDPADAYNGV
NRSSLSYLTLYTRGDKNSESVGNRQASEKESVDFRPPEYILPGCKDRPLSPLQPVRDDWK
PLQCLRVLTMSSWNPPPGNRKMHGDLMYLNVLTMEDKELNITSSTRGFYLNQSTAFNFNP
KPAVPKILCHSLVELLSQVSPAFRKTFSALQKKRVQQHPYERIATPFQLFTWIAHQGDHT
LDCVRAEETHTSCMGQDEHTAGQSRDWNEELQGCRELSRNSLQERLHRERSIFRTNSDFV
EAATRGAVAVVDGNVMPLNPAEAPHMQMFIWNNLFFSLGFDISEHYHPLGGNTAAHAAAI
CDLRGAQAYTSVDIEGLYTLGTAVVDYRGVRVIAQTIVPGILEKNQEQSVVYGSNDYGQT
VFTHPRFLELLDKTSKPLRIQRHQVLDHRNSPVELCSGIETKGILGNDGRPYILDLLRTF
PPDLNHQFIETAESSEVPKECQSFGYPRQHHHSLASLRPELIEAFVQHRYELYVKLVSQG
LIQLEEQEKSMRTGDAATDGADMELQRRNVIIKACKAAGSVCDSGFDICFNPDVCSPGVR
FSSECVEKIQMQRQLLWDAAAFLLSKQIPAVLRDCLEHAAVPMDGATLTAALHQRGVNVR
YLGTLLRKLDKMEERGRLSHIQRISISEVIIRSAKHIFRTYLQDVEPAAYSAAVSHFLNC
LLSSSSCLPDSCSDELLFRRRSRRRRSHGSRVSLLTDSAWARLTPCELWVRIRAEAGDYY
HYTIDCESIDEEIEKHGLQKISLLREIAIKTGIQVQLREYVFESRHRPAFSEEDVVNMFP
VVKHLKPTGTDATRLVQHAQVAVQQGLLKEGHELISQALTLFSSVCGVLHEDVCMCLRLL
GRLSYILGEFADALSHQEKAVLSSERVQGIDHPQTIQDYTHLALYCFAGGRLSTSLQLLY
RARYLTLLVIGDDHPQVALLDSMLGLVLHGLMEYELSQKFLQNGLILTSKYHGAMSLKHA
HSHHLLATVYESKGEFRSALKHEKEAYSLYKSQVGEDHDSTKESSDYLKSLTQQAVILQK
AINQLYSNTHSACIPPPKFSTPSLPAILQQLNLVCGIILIPLSAKEIADLRTELKERVQM
EEMEKRLKNFSQQKTTLDD
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagtccagtgctgtcacacactcacaaactactttaagtgtaaggatgca
ctgggccagggtgggccagaaagatcccctctgctctccagcgatgagagtgaatgtgac
tcaccaagcctgcaggacgacttggaggacgatctgctgaccgtctccaccagtgtgtca
aacccaacccttgaaccagagaacttcctgtatcctgatatcatcctgagtagcaacctc
ggaggggacgtgacgctggtggagccgatggtgtgtctgttggtgtctgaggaggaagag
gaagtaaggctggatgagtggggagatggacaagagagaagcaacagaggggcaaacagg
ggtttttctgaggtggagacacaaattggtatcggggtacagactcagacagagtcacaa
gcagaagttcaggcacaaatgaaaatacttgtgtgccataatgagactgtggggagacag
gaaaacacactaacaaacactggtgctacagacaagatggtggtggatgtttgggaagaa
catgaaatactgaaacaggtggatgtgctcctggaggcaccgacatcacaggagggacac
tcagaagctgtcactggaatggcatcagagaaacaacagaaggcgacagactctggaaac
tggtctgacatcgactcttttgttgacttagaggtgccagagaagacagagagacagaca
gagaaaaacaaactggccttcaaagatatacacaaggacacagaacaaaaagaaacacac
atccatgagggcctgacctcctctttcgcaaagcatgcattcaaaactaaacgaaataca
gagttcatggaagagataaacacggatgaagagaatgtctttgagttgcaccacactttg
cccacacaagagaacgctgagggcagagaacgaaagtttgaatcagggtgcacctcagtg
acactgtctgaacacattctaaataacatatatgagaacattgctcctgtgaagtcacag
aagaacatggaaccaacaaaatacaacatcatcaacactgaaatagtggaggagtgtggt
gtacacctgacacgacagagcgatgaggctaatgaacagactggacagctgactgtggag
acagatctaaatataaaagaaaaggttatcaacacaacatcaaacatccatctgcccgag
gagcacgcagaccaaacagcaggtcagtcatcagatcatggtcaagaaaacatgaagagg
gaagaagatgacaacaagactggtctgcagcgtgttgtggaggaggtggagggtggggct
gagattatgctgttttcagttgacaggctgtttctggcagcaccacatgttaaagcactt
ccaagtccaattgaagagagccccgaggatgatcgtccagagcagtctgatgttgataaa
aggaaacaacttactatccgtgacatagttgatctccaggagactggctttactgtcaga
attcaatctcctggagcagaaagttttgagcttcaggtgtcaggccagcttttggtggca
gagctgcaccaagtcctgatggagcacaagatcacctgccaccgcacatgcttttccctc
cagctgggaggcacagcactcgacagcctcacagagctgtgctccattgacggcatccag
gatggagcactgatcaaagtggtggaggattcttactcagtgcgtgatgctcgtcttcat
ctcagacatgtacgtgatcttctgaggagcctcgaccctgcagatgcatacaacggagtg
aaccgcagctcactgtcttatctaacgctttacaccagaggagacaaaaatagtgaaagt
gtggggaacaggcaagcttctgaaaaggagtctgttgacttcaggcctccagaatacatc
ctccctggatgtaaagaccggccactcagtccactgcagcctgtcagagatgactggaag
ccattacagtgcctgcgggttctgaccatgagcagctggaacccccctccaggaaacagg
aagatgcatggtgacttaatgtacctcaatgtcttgacgatggaagacaaggagctcaat
attacttcctctacacgtggtttctacctcaaccagtcaactgccttcaacttcaaccct
aaacctgcagttcccaaaatcctttgccactctctagttgagctgttgagtcaagtcagc
cctgctttcaggaaaaccttcagtgccctgcagaagaagagagtccagcaacacccttat
gagcggatcgcaacacctttccagttattcacctggatcgcccatcagggagaccacacc
ctcgactgtgtcagagcggaggagacacacaccagttgcatgggccaagatgagcacaca
gctgggcagagccgggactggaatgaagagctgcaaggatgcagggaactctctaggaac
tcccttcaggagcgcctgcaccgagagaggagcatattcaggaccaacagtgactttgtt
gaagctgctacaagaggtgctgtagctgttgtcgacggtaatgtcatgccgttaaaccca
gccgaagcgcctcatatgcagatgttcatctggaacaatctcttcttcagcctggggttt
gacatatctgagcactaccacccactagggggcaacactgctgctcatgctgctgccatc
tgtgacctgagaggagcacaggcatacacatctgtcgacatagaggggctttacacactt
gggacagctgtggtggattatcgtggtgttcgtgttatcgctcagacaattgttcctggg
atactggagaaaaatcaggagcagagtgtagtatatggctctaatgactatggacaaaca
gttttcacacaccccagatttttggagcttctggataaaacaagtaaaccactaagaatc
cagcgtcaccaggtgctcgaccacaggaacagcccagtggagctttgctctggcatagag
accaaaggcatcctgggtaacgatggaagaccctacatcttggaccttctccggaccttc
ccccctgaccttaaccaccagttcatagagacagcagagagcagcgaggtgccaaaagag
tgtcagagctttggttacccgaggcaacatcatcacagccttgccagcctgagaccagag
ctgatagaggcctttgtccagcacaggtatgaactttatgtcaagctggtgtcccaggga
ctcatccaactggaagaacaggaaaaatccatgagaactggagatgcagccacagatggt
gctgacatggaacttcagagaagaaatgtgattattaaggcttgtaaggctgctggatca
gtgtgtgactctggctttgacatctgcttcaatcctgatgtttgctctccaggtgttcgt
ttctcctctgagtgtgtcgagaagattcagatgcaaagacagttgttatgggacgcggct
gcttttctactgtccaaacagattccagcagtgctgagggactgccttgaacacgcagct
gtgccaatggatggagccaccctgactgcagctctacatcagcggggtgtgaatgtgcgc
tatctgggcaccttactgaggaagctggacaagatggaggagagagggagactcagccac
atacagagaatctctatcagtgaggttatcattagaagtgcaaaacacatcttcaggacc
tatctgcaggatgtggaacctgcagcatattccgctgctgtcagtcacttcctaaactgc
ctcctgagttcctcctcctgtctcccagactcctgctcagatgagctactctttcgccgc
aggagtcgacgtcgacggagccacgggagtcgagtctccttgttgacggatagtgcatgg
gctagactgaccccctgtgagctgtgggtcaggatcagggctgaggctggagattattat
cactacacaatagactgcgaaagtatagatgaagaaatagaaaagcatggccttcagaag
atctccctgctgagagagattgccatcaagacaggtattcaggtgcagctgagggagtat
gtgttcgagtctcgacacaggccggcgttcagtgaagaagatgttgtcaacatgttccct
gttgtcaaacacctcaaacctacaggaacagatgccacgcgactggtgcaacatgcacag
gtggcagtacagcaggggcttctcaaagagggtcatgaattgattagccaggccttgact
ctattcagcagcgtatgcggggtcctgcatgaggatgtgtgcatgtgcctgcgtctcctg
ggacggctcagctacatcttgggggaatttgcggatgccctcagccaccaggagaaagct
gttctgagtagtgagagagtgcaaggtatagaccatccacagaccatacaagactatact
catctggccctgtactgctttgctggaggccgactctcaacttccctacagctgctatat
cgcgctcggtatctcaccctgcttgtgattggagacgaccatccacaagttgcactgctg
gacagtatgctgggtctagtgcttcatggactaatggagtatgagctttcccagaagttc
ctgcagaatggcttaattttaacctcaaaataccacggtgccatgtccctgaagcatgca
cacagtcatcatctgctcgccacagtgtatgagagtaaaggagagttccgatcagctctg
aagcatgagaaagaggcttattcactatacaagagccaggttggtgaggaccatgacagc
acaaaggaaagctcagattacctgaagagtctcactcagcaggctgtgatcctccagaaa
gccattaaccagctctacagtaacacacacagtgcctgtattcctcctccaaagttttca
acaccgagtcttcctgcaattcttcagcagctcaacctcgtgtgtggaatcattctcatt
cccctgagtgcaaaagaaatcgcagacttgaggactgagttgaaagaaagggttcaaatg
gaagaaatggagaaaagacttaagaacttcagtcaacagaaaacaacactggatgattaa
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integrated database retrieval system
