Larimichthys crocea (large yellow croaker): 104934605
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Entry
104934605 CDS
T04659
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104934605 (rfwd3)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104934605 (rfwd3)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104934605 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
zf-C3HC4
WD40
zf-RING_UBOX
WD40_CDC20-Fz
WDR55
EIF3I
zf-C3HC4_2
Beta-prop_WDR3_1st
zf-rbx1
Beta-prop_EML_2
zf-ANAPC11
Rtf2
zf-RING_5
zf-RING_11
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_2
zf-C3HC4_4
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
CFAP43_N
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
Beta-prop_EIPR1
zf-Nse
Beta-prop_WDR36-Utp21_2nd
NSRP1_N
Motif
Other DBs
NCBI-GeneID:
104934605
NCBI-ProteinID:
XP_027128809
LinkDB
All DBs
Position
XXI:594814..606698
Genome browser
AA seq
722 aa
AA seq
DB search
MEAMEVDSPMEMQGRGGVQPVVAPAGEDPNAPLVISDSGSSTEVDDDDDDDNEGRQTASR
VPPRLPATWAFSQRAVGGSAATPSAAQGAPIRRRLRQGLRVHYPSQTAAPSRGFPDFLLR
APAASVAQPESGSTTEVSESDEDAEAENEGDEGGTSAAAEPVDPVLPPASPRLNASIQNT
LPQEAVPTNSSSAADGERTEAKNLVVQSVSAASASLQSSHGEEGEGDNCTICFEAWTTAG
EHRLSALRCGHLFGFTCIQRWLKAQGPAAKCPQCNKKAKRSDIVLLYAPKLRALDNSEQE
ILKKSLEQEQSLRRKAELESAQYKLKLQVVTNKYGQAQQELQELKALMAQAGRSSVPSSS
SSVSTSLLFSLSQRADGSRTAQYSFSKAVLVSQAGGSRVLSYCEPLSCLLASQPSPQATL
VPGCGVKKVSVVNMKASQYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTVV
QTYNAGKPVWSCCWCLDNSNYVYAGLSNGSVLVYDTRDTSTHVQELHPLRSRCPVASLCY
VPRAASSSFPCGGLIAGSLEGGCFWEQVNETTYRPHVLPLETAGCTDIQVETESRHCLVT
YRPGRSNPSLRCVLMALNRTPQQDSSQLPSCSCSPVQTFSAGSSCKLLTKNAVFKSPDGG
GMLVCAGDEASNSTMVWDAGTGSLLQKLPADLPVLDISPFTVNGEHFLASLTEKMLKLYK
WE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtcgactctccgatggagatgcagggaagaggcggtgtacagcca
gtggttgctcctgcaggtgaagaccccaacgcaccactagtcatctcggactctggcagc
agcactgaggtggacgatgatgatgacgatgacaatgaaggacgacagacggcctctcgt
gtgccgcccagacttcctgcgacctgggcgttcagtcagagagcggttggcggctctgcc
gccacaccatcagctgctcagggggcgcccatacgacggagactcaggcagggtctcagg
gtgcactaccccagccagactgcagcgccctccaggggctttccggacttcctgctccga
gcaccggccgccagtgtggctcaaccggagtccggcagcaccacagaggtcagcgagtct
gacgaggacgcggaagcagagaacgagggagatgaaggcggcacatctgctgccgcggag
cctgtcgaccccgtgcttccgcctgctagtcctcgcctcaatgcctccatccaaaacaca
ctaccacaagaagctgttccaaccaactccagttcagctgcagatggtgagaggacagaa
gctaaaaatctggtcgtccagtcggtgtctgcggcctcggcttctctccagtcgtcacat
ggcgaggagggtgaaggcgacaactgcacaatctgctttgaggcgtggacgacagcgggc
gaacacaggctgtctgctctgcgttgtggtcacctctttggcttcacctgcatccagcgc
tggctgaaagctcagggcccggccgctaaatgtccacagtgcaacaagaaagccaagcgt
tcagatattgttctgctgtacgctccaaagctgagagcactcgacaactcggagcaggag
attttaaagaagtctctggagcaggagcagtctctgagaaggaaagctgaactggaatca
gctcaatacaaactgaaactgcaggtcgtcaccaacaaatatggacaagcacaacaagag
ctgcaggagctgaaggctttgatggctcaggccgggagaagctcagttccctcctcgtcc
tcctcagtgtcaacctcgcttctcttcagtctgtctcagagggcggacggctccagaaca
gcccagtacagcttctccaaggcagtgctggtgtctcaggctggaggctccagggtttta
tcctactgtgaacctttgagctgcctgctggcctcgcagccttcccctcaagccacgctg
gtgcctggttgcggggtgaagaaggtgagtgttgtcaacatgaaggcgagtcagtacgtt
cccatccacagtaaacagatccgaggtctgtccttcaacaggcagaatgacagtctgctg
ctgtctgctgctctggacaacaccatcaaactgacaagtctgctgacaaacactgtggtt
cagacctataatgctggtaaacctgtgtggagctgctgctggtgtttggacaacagtaac
tacgtctatgcaggtctgagcaacggctctgtgctcgtctacgacaccagagacaccagc
acacatgtccaggagctgcatccgctacgctccaggtgtccagtggcatctctgtgctac
gtcccgcgggcggcgtccagctccttcccctgtggcgggctgatcgctggctctctggag
ggcggatgtttctgggagcaggtcaacgagaccacatataggccgcatgtcctgccactg
gagaccgccggctgcactgacatccaagtggagacagagagccgacattgtctggtcacc
tacaggccagggcgctccaacccgtctctgcgttgtgtcctcatggctctgaacaggacc
ccccagcaggactcgagccagctgcccagctgctcctgctctcccgtgcagacgttcagc
gctggctcctcctgcaaactgctcaccaagaacgccgtcttcaagagtccagacggaggc
ggaatgctagtctgcgccggggatgaggcctccaactctaccatggtgtgggatgccggc
actgggtctctgctccagaagcttccagctgaccttccggtgttggatatcagcccgttc
acagtgaacggtgagcacttcctagcctcgctcactgagaagatgctgaagctctacaag
tgggagtga
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