Larimichthys crocea (large yellow croaker): 104934658
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Entry
104934658 CDS
T04659
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lco01006
]
104934658 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104934658 (trit1)
Enzymes [BR:
lco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
104934658 (trit1)
Prenyltransferases [BR:
lco01006
]
Compound prenylation
tRNA dimethylallyltransferase
104934658 (trit1)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
104934658 (trit1)
Prokaryotic type
104934658 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
IPT
zf-met
AAA_16
AAA_22
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
104934658
NCBI-ProteinID:
XP_019130944
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All DBs
Position
XIII:complement(44918787..44954009)
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AA seq
504 aa
AA seq
DB search
MRAGVSWGKRGSSIMAASARSVQCAFRRAMVPSLVVILGATGTGKSKLAIEIGKRLQGEI
ISADSMQVYQGLDIITNKVTAEERAQCRHHMISFVDPLVSSYTVVDFRNKALSLIDDMHN
RKKLPVIVGGTNYYIESLLWRVLLDTGQENEESGDGGEGAPDRKLELEKLGGVELHKRLA
EVDPKMAAMLHPNDKRKIARSLQIHEETGVPHSRWLEEQRGQKGGDGLGGPLRYPAPCIF
WLHADMDALDTRLDARVDEMLSAGLIEELRDFHVRYNQQKVQADSQDYQHGIFQSIGFKE
FHDYLTVPESSSTQQEKDALRDKGVEALKIATRRYARKQNKWVRNRFLKRPGDNVPVVYA
LDVTDASKWEETVLNPALQILDSLSKGEEPAIAPIRVQKPEQGNKRSSHSCDLCDKVIIG
DLEWTAHLKSKKHRYHVKKKRKSDPSCDQSQVTTTTPSASAAAEIVESLSKDSCAAVVAP
GCGETSQESSQDTRTANKEVPVTF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccggcgtcagctggggcaagagaggaagcagcatcatggcggcgtccgctcgc
agcgtgcagtgcgcctttcgcagagctatggtcccgtcgttggtggtgattttaggagct
accggcaccggaaagtccaagctggcgatcgagatcgggaagcggctccagggagaaata
atcagcgccgactccatgcaggtctaccagggcctcgacatcattaccaacaaggtgaca
gctgaggagcgcgctcagtgcagacatcacatgatcagctttgtggacccgttggttagc
agttacacggtggtggacttcaggaacaaagcgctgtctctgatagacgacatgcacaac
cgaaagaaactgccagtcattgtaggaggaacaaactattacattgagtctctgctgtgg
agagtcctgctggatacagggcaggagaacgaggagtcgggggacggaggagaaggggct
ccggataggaaactggagctggagaaactgggaggagttgagttacataaacggctggcg
gaggtggaccccaaaatggctgccatgttgcaccccaatgacaaacgcaagatagccagg
agtcttcaaattcacgaggagacaggcgttccccatagtcgctggctggaggagcaaagg
gggcagaaaggaggcgatgggctggggggcccgctgagatacccagccccctgcatcttc
tggctgcacgctgacatggacgctctcgacacgcggttggatgctcgagtagatgagatg
ttgtctgctggactgatagaggagctcagagacttccacgtccgctacaatcagcagaaa
gtccaggctgacagtcaggactatcaacatgggattttccagtctatcggttttaaggag
tttcatgattacctgaccgttcctgaaagcagcagcacccagcaagagaaggacgcacta
cgagacaaaggtgtagaagctttgaagattgctacgagacgttacgcacggaaacagaat
aaatgggtccgcaaccgctttcttaaacgaccaggagacaacgtaccggtggtgtatgcc
ctggatgtaacggacgcgtcgaagtgggaggagacggtgctgaaccctgcactgcagata
ctggacagtctcagcaagggtgaggagccagctattgcaccaatcagagtgcaaaagccg
gagcagggaaacaagcggagcagccattcgtgtgatctgtgtgacaaggtgatcatcggt
gacttggagtggacagctcacctcaaatccaaaaagcatcgctaccatgtgaagaagaag
aggaagtctgatccgagctgtgaccaatcccaggttaccaccacaacaccttctgcctct
gctgctgcagagatcgtggagagcctctcaaaggactcttgtgctgctgttgttgccccg
ggctgcggtgaaacctctcaggagtcttcccaagacaccaggacagcaaataaggaagta
cctgtgacattttga
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