Larimichthys crocea (large yellow croaker): 104934667
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Entry
104934667 CDS
T04659
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104934667 (rnf115)
04121 Ubiquitin system [BR:
lco04121
]
104934667 (rnf115)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104934667 (rnf115)
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104934667 (rnf115)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104934667 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-C3HC4_3
C1_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104934667
NCBI-ProteinID:
XP_010748687
LinkDB
All DBs
Position
XIII:15782980..15790152
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AA seq
314 aa
AA seq
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MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGANGIDDTAT
HFAELWHLLLLERPFTDGDTPDSEPRLPGGRLGGLSDLGGLGGGPIGGSVPAGLGGPMGG
LLGAGEHWGPGRPPRLHRERRYRTRVSARPDRSPAVEGIVQQFLTGLFANSGVPGSPPLS
WTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVNISQEQADCCM
ECPVCKDDFAVGEPVRQLPCNHFFHSDCIIPWLEMHDTCPVCRKSLNGEDSSSQPPSESP
SLSMDPRTQERWSF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttccaccgcatcgctttttctgtcactgttgtaagggagaa
gtaaaccccaaactcccggagtacatctgtccaagatgtgattcagggttcatcgaggaa
gtaacagaagactccagtctcctagagggtggcgctaatgggatagatgacacagccaca
cactttgcagagctatggcacctgttgttactggagcggccatttacagacggcgacaca
cctgactcagaacctcggctccccggagggcgcttggggggtctcagcgatctggggggg
ttgggagggggaccaatcgggggttcagtcccagcaggtctagggggacctatggggggt
ctactaggagccggggaacactggggaccaggacgcccccctcgcctgcacagagagagg
agataccggactagagtcagcgctaggccagatcgctcgcctgctgtagaggggattgta
caacagtttcttaccggcctctttgccaattctggggtccctggctcacctcccctctca
tggacggggatgctgcactctaacccaggcgattacgcctggggacagggagggttagat
gctgtgataacacagttactaggtcagttggagaacacaggacctccaccagcagaaaaa
gagaagatctcctctctcccaactgtcaatatctctcaggaacaagcagactgctgtatg
gaatgtccggtgtgcaaagacgactttgcagtgggagagccagtcagacagctaccctgt
aaccacttctttcattcagactgtataataccatggctggaaatgcatgacacgtgtcca
gtgtgtaggaagagtttgaacggagaagacagcagcagccagcccccatcagagtcccca
tctctctccatggacccccgcacacaggagagatggtccttctga
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