Larimichthys crocea (large yellow croaker): 104934904
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Entry
104934904 CDS
T04659
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
lco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104934904
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104934904
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104934904
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104934904
03036 Chromosome and associated proteins [BR:
lco03036
]
104934904
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104934904
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104934904
SWI/SNF complex
104934904
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104934904
PBAF complex
104934904
SWI/SNF complex
104934904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
104934904
NCBI-ProteinID:
XP_010748972
LinkDB
All DBs
Position
III:complement(41714101..41720685)
Genome browser
AA seq
384 aa
AA seq
DB search
MRSRAELCCLSMALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWR
KLASVEERKKIVESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLR
EQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENAT
QSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAI
RQQIESYPTDSILEDQADQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSEL
GLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEM
EKKIRDQDRNTRRMRRLANTAPAW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgagcggagctttgttgtctcagtatggcgcttagcaagacgtttggacaa
aaaccggtcaagtttcagctcgaggaggatggagatttttatatgatcggctcggaggtg
ggaaactacctccgcatgttcagaggctccctgtataaaagatacccgtcactatggaga
aaactggcatcagtagaagagcggaagaaaattgtggagtcatcgcacgatcacggctac
actcagctggccaccagcgtgaccctgctaaaggcttcggaggtcgaggagatccttgaa
ggaaatgatgagaagtacaaagctgtctccatcagcactgagccccccgcctacctcagg
gaacagaaggcgaagaggaacagtcagtgggttcccacgctgcccaacagttctcaccac
ctggacgccgtgccctgctccaccaccatcaaccgcagtcgactgggccgtgacaagaag
aggaccttcccactgtgctttgacgaccacgatccagcagtgatccatgagaacgccact
cagtctgaggttctggttccaatccgtctggacatggagatcgagggacagaagctcaga
gacgctttcacctggaacatgaacgagaagctgatgacacctgagatgtttgctgagatt
ctttgtgacgacctggacctcaacccgctggccttcgtccctgctatcgcctcggccatc
cgacagcagatcgagtcttatccaacagacagcatcctggaggaccaggcggaccagagg
gtcatcatcaagttgaacatccacgttggcaacatctctctcgtggaccagtttgagtgg
gatatgtctgagagggagaactctccagagaagtttgccctgaagctctgctctgagctc
ggcctgggcggtgagtttgtcaccaccatcgcctacagcatccgtggtcagctgagctgg
caccagaggacgtacgccttcagcgagaaccccttgcccacagtggagatagccattaga
aacacaggtgatgctgaccagtggtgccccctgctggagaccctgacagacgcagagatg
gagaagaagatcagagatcaggacagaaacacaaggcgaatgaggcgacttgcgaacacg
gcacctgcatggtag
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integrated database retrieval system
