Larimichthys crocea (large yellow croaker): 104934934
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Entry
104934934 CDS
T04659
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104934934
Cilium and associated proteins [BR:
lco03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
104934934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
Rapsyn_N
TPR_11
TPR_NPHP3
TPR_6
TPR_14
TPR_19
PUB
TPR_9
Motif
Other DBs
NCBI-GeneID:
104934934
NCBI-ProteinID:
XP_019134189
LinkDB
All DBs
Position
IX:178227..291779
Genome browser
AA seq
2557 aa
AA seq
DB search
MEKQRTRKEKFSLFGSRSTSRTTNPPSSSSSSSSPVISPAHSLKRSDRPPCSGAPGLSKA
EFLERVRRSNQACQQGEYALAVRLYSEALTADPQNCILYSNRSAAYLRLGQYSTALDDAI
KARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLR
DTLEPTYQQLQKMKLDKSPFVVVSVIGQELLTHSFHGASVVVLEAGLKIGTCSLKLRGSV
FSALSSAYWSLGNTDKSMAYMQQDLEVTKTLGDQSGECRAHGNLGSALFSKGSYREALAN
HRNQLVLAMKLKDREAASDALSSLGHVYTAIGDYPNALASHKQCVLLARQTQCQLSEARQ
LGNMGAVYTALGDFTNAVQCHEQHLDIAKTLENRREEARAYSNLGSAYHSQRDFDKAISY
HTRVLELAQEQGDRAIEMRAYAGLGHAARCMQDLERARQYHQHQLEIAQELQDRAAQGRA
SSNLGIIHQMKGEYEAALKLHKAHLSFAQELSDYAAQGRAYGNMGNAYHALGIYDQAVRY
HRQELQISLEVNDRPSQASTHGNLAVAYQALGAHDRALQHYLHHLTIARELRDTQSEARA
LANLGNFHSWRGEYAQALPYYQQYLALAPGLQDLEGEGKVCHNLGYAHYCLGQYRDAVRY
YEQDLALAKDLQDKFAQAKAYCNLGLAHKALGEYNKAEECQRYLLSLAQALDNTQAVFRA
FGNLGDVCVCRGDLPGAVRFYQQQLTLAQKVSDQKMEADAYSALGSVHRLLRQLDTALSF
HSQELTVRKDLGDQQGECRTLGHLAAVHMALGDYATTFQCYEAQLGLAQGLRDARLEAQV
HGNMGITKMNMGVFEEAIGYFEQQLAMLQQLSGTESMLDRGRAYGNLADCYDALGDYEEA
IQYYEKYLTMAQSLNHVQDQEKAYRGLGNAHRSMGSLQQSLVCFEKRLVVAHELGGEGGG
KAQAYWELGTLHSQLGNYEQALSCLEHQLNIARTAGDKSLEAEASDALGGVYQLMADNET
ALQWHQRALDIAEQTGCVRSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLIA
KTLAYGSLGRIHHALQNYAQAVMYLQEGLRLAEQLGRREEEAKIRHRLGLSLWAGGNLEE
AQHQLYRASVLFETIRHETQHSTDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAERG
RTRAFADLLVERQKGSQQAASADPYVPVTVENILETVNGQRAMVLYYSLAGGFLYSWLIS
PGTGIVKFNEVYLGEAGVEASELQDGGGGGGGSPQGGGGAGGGGPLSMEQYICNAREALG
VDSHYSRVCSSSETESEAGDLLEQQFEELNNKLTSATDPTGYLRMVSRNNLFNRSCQSMT
SLYSATVSPVKDSSSSPLCRPSNISKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLV
LEGELYLIPFALLKGSSSNEYLYERFSLISVPSLGSLGATIKPHPRRGGPLLCSDGGSVA
AVVGAPRLPPSVMDRWLWGPLPSAQDEALWLGEQLGCHPLTGANATKERVLAALSQAECV
HFATHISWKLAALILAPSQEHAGGDGAGGRPREKSPSGASTSGETAGQDGKIRGSFRSQS
SPERLRATEEISEDGGSVCEVESVCNSPPLHDFLLTAADILDLCLSVKLVVLRLYPESSC
RVSADGVVGLTRAFLAAGVQCVCVSLWPVPIAASKLFTHTFYTALLNGTKASAALTEAMK
TLQSSKHFSHPSNWAGYMLIGSDVKLNSPMSLVGQALAEILQYPERARDALRVLLHLVEK
SLQRIQSGQCNPMYTSQQSVENKVGGVPGWQALLSAVGFRLDFSGSGAGLPAAVFFPTSD
PGDRLQQCSTTLQSLLGLTPPALQALCKLVTTSEAGEQLIHKLHQVLVQLQSGDKEQDFS
LAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRIMHFALQSLLAL
FDSTELPKRLSMDSSSSLESLSSSQSASQPHSLPLSFGCYPPQPSFLPPVCPDNLSCDAI
SVYSLSSLASSLSFLSRPEPAGSDIISQRSHQQDVDRPRGLYASHRHSGGLQRGRLTNHG
GGGLAGEGEDEEYEGYSIISSEPLGRGRRECDTLPLPAGHRQGRGGAGRGSAGGHGYPVT
VSSKGSISTPTSPIKAPPLPLKVPSSPKPKQEISSPQRTGKGKVSSSESDQSSTETDSTV
KSQEERTVPAGQLDPQELAQKILEETQSHMQAVESLQKANIRGKTARGPEGRQEAHGKQT
SLSTPATPTLTPTGGARGFQPSETSAFSRPPSRASLKACSSPLSFPSHLSPVSTSVSTPP
PTRPKPPSRSSSLQKISSGYSSPAHSSPSLSLSVKEQASPDVHSQAQIKLKYPTSPYTAH
ISPSHSPAGSAPSPSLSYSSTGSVSASSSPANTPELNQSRHDNKVQAIHNLKTFWANAGQ
KHDVPCPASLLRGGNKKMSTVQKDVLGLLNLSPRHESASKNGESPEERNTDDRPNGHQKL
EAKPPPPPTNSKGGIKLPSGNGYKFLSPGHFFPSSKC
NT seq
7674 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaagaaccaggaaagaaaagttctctctgtttggttctcgctccaccagc
aggaccaccaaccctccgtcctcgtcctcctcctcttcgtcccccgtgatctctccagcc
cactcattaaaaaggtcggaccggcctccgtgctccggcgcccccggcctgagcaaagca
gaattcctggagcgagtgcgccgcagtaaccaggcctgccagcagggggagtacgctctg
gccgtgcgtctctacagcgaggccctcaccgccgacccccaaaactgcatcttgtacagt
aaccgctccgccgcctatctcagactgggacagtacagcaccgctctggacgacgcaatc
aaagcacgtctcatcaaccccaaatggcccaaggcctactttcgtcagggggttgccctg
cagtacctgggccgtcatgccgacgccctggcagcattcgcctccggcctcgcccaggac
cccaagagtctgcagctgctcgttggcatggtggaggctgccatgaaatcccccctcaga
gacacccttgagcccacctaccagcagctccagaagatgaagctggacaagagtccgttc
gtggtcgtgtctgtcatcggtcaggagctgctgacccacagtttccacggcgcctctgtt
gtggtcctggaggccgggctgaagatcggcacatgctcgctgaagttgcgtgggtctgtc
ttctcggccctgagctccgcgtactggtctttaggtaacacggacaagagtatggcctac
atgcagcaggacctggaggtgaccaagaccttaggtgaccagtcaggtgaatgccgagct
catgggaaccttggctcggcgctcttctccaaaggcagctacagagaagctttggccaat
cacaggaaccaactcgtgctcgccatgaagctcaaggacagagaggctgcgtccgatgcc
ctcagcagtctgggccatgtgtacacagctatcggtgactaccccaacgcgctggcgagt
cataaacagtgtgtgctgttggcgcgacaaacccagtgccagctctctgaggctcgccaa
ctgggcaacatgggcgccgtgtacacggcgctgggagacttcaccaatgctgttcagtgc
cacgagcagcacttggacatcgcaaagactttggagaaccggcgtgaagaggcacgggca
tacagcaacctgggcagcgcctaccactctcaacgggacttcgataaggccatatcgtac
catacacgagtactggagctggcacaggagcagggcgacagagccatcgagatgagggca
tatgctggactggggcacgctgcccgatgcatgcaggacctggagagggctcgtcagtac
caccaacaccagctagaaatcgcccaggagctgcaggacagagcggctcagggccgggcc
tcgtctaacctgggcatcatacaccagatgaagggggaatacgaggcagcactgaagctc
cacaaagcccatctgtccttcgcccaggagctgagcgactacgctgcccaggggagggcc
tacgggaacatgggcaacgcctatcacgcactcggcatctacgaccaagctgtccggtac
caccgacaagaactacagatctcactggaggtgaatgaccgtccatcccaggcctccaca
catgggaacctagctgttgcctaccaggcgctgggtgctcacgaccgagctctacagcac
taccttcatcacctgaccatcgcacgagagctccgagacactcaaagcgaagcaagagca
ctagccaacttgggtaacttccacagttggagaggtgaatatgctcaggctttgccatac
taccagcagtacctggctctggccccaggtttgcaagatctggagggagaaggcaaggtt
tgccacaacctcggctacgctcactactgcctgggacagtaccgagacgctgtcaggtat
tacgaacaggacctggccttggcgaaggacctccaagataaattcgcccaggcaaaagcc
tactgtaaccttggtctggcccacaaagcacttggggagtacaacaaagcagaggagtgt
cagagataccttctctccctcgcacaagccttggataacacacaggcggtgttcagggcc
tttgggaatctgggggatgtgtgtgtttgtcggggagatcttccaggagccgtgaggttc
taccagcagcagttaaccctcgcgcagaaggtcagcgatcagaagatggaggctgatgca
tactcagcacttggatcagttcacaggcttctccgccagctggatacagcgctatccttc
cacagccaggaactcaccgtccggaaggatctaggcgatcagcagggggagtgccgcacc
cttggccacttggcggcggtacacatggccctcggagactacgctacaacttttcagtgt
tatgaggcccagctgggtctcgcacagggactcagggatgcccgcctggaggcccaggtc
catgggaatatgggcatcaccaaaatgaacatgggggtgtttgaggaggcgatcggatac
tttgagcagcagctggccatgctgcagcagctcagtggaactgagagcatgctggacagg
ggtagggcctacgggaacctggcagactgctacgatgctctgggagactatgaggaggct
attcagtactacgagaagtacctgacgatggcgcagagtctcaaccatgttcaggaccag
gagaaggcctacagagggctcggcaatgcgcacaggtcgatgggaagcctccagcagtcg
ttggtgtgctttgagaagcggctggtggtggcccacgagctgggtggagaaggcgggggt
aaagctcaggcttattgggagctgggcactttacacagccagctgggcaactacgagcag
gccctctcctgcctggaacaccagcttaacattgcacgcacagcgggggataaatccctg
gaagcggaggcgagcgatgctcttggaggagtttatcagctgatggcagacaacgagacg
gcgctacagtggcatcaacgggcgttagacatagccgagcagacgggatgtgtgaggagt
cagggccgagcctacggcaacctgggactgacctacgaagctctgggcaactacgagcga
gccgtggtcttccaggagcagcacctgagcgtggcagcgcaaaccaacgatcttattgcc
aaaactctcgcctacgggagccttgggaggatacaccacgcactgcaaaactacgcacag
gctgtgatgtacctacaggaaggtctgcgtctggcagagcagttaggtcgaagggaagaa
gaagctaagatacgccatcgcctcggcctgtcgctgtgggccggaggaaacctggaggag
gcacaacaccagttgtacagagcgtccgtgctattcgagacgattcgtcacgagacgcag
cacagcacggattacaagctctccctgtttgacctgcagaccagctcgtaccaggctctc
cagagggtcctcgtcagcctagggcggcacgacgaggcgctggcgatagcggagagaggg
cggacgcgcgccttcgccgatctcctggtcgaacgccagaaagggagtcagcaagcggcg
agcgccgacccttacgtccccgtgaccgtggagaacatcctggagacggtcaacggtcag
agagccatggtcctctattactccctggctggaggctttctgtacagctggctgatatct
ccagggacaggtatcgtgaagtttaacgaggtgtatctcggagaggccggagtggaggcg
tctgagctccaggatggtggtggtggtggtggtgggagcccacagggtggaggaggagca
ggcggaggaggtccactgtctatggagcagtacatctgcaacgctagagaggctctggga
gtggacagccattacagcagagtttgctccagcagtgaaacagagagtgaagccggagat
ctgttggagcaacagtttgaggagctgaacaacaaactcacctcagccactgaccccaca
ggctacctccgcatggtgtccagaaacaacctcttcaacagaagctgtcagagcatgacg
agcctgtacagtgccacggtatctccagtgaaggacagttcatcatctcctctttgccga
ccgagtaacatcagcaaacctcctctacgagctctttacgacttactcatagcaccaatg
gaagggggtctgatgcacagcagtggaccggtgggcagacaccgacagctcgtgttagtg
ctggagggggaattgtacctgatcccgtttgctttgctcaaaggcagctcctccaacgag
tacctttacgagaggttcagtctcatttctgtaccttcgttaggcagcctgggagccaca
atcaagcctcatcctcgtcgtggcggccccttactttgctcagatggaggttcagtagcc
gccgtggtcggggctcctcgcctgcctccctctgtgatggaccgctggctgtggggcccc
ttaccttcagcccaagatgaagctctttggctgggggagcagctgggatgtcatccccta
accggagcaaacgccacaaaggagcgcgtcctagcggctctgagtcaggcggagtgcgtt
cactttgccactcacatatcctggaagctcgccgctttgattctcgccccgagccaagag
cacgccggaggcgacggggcgggcgggcgacccagggagaagtctccgagtggagcgtcg
acctcgggcgagactgcaggtcaggatggaaagatcaggggctcgtttaggagtcagagc
agcccggagagactccgagcgacggaggaaataagcgaagatggaggaagtgtgtgtgaa
gtggagagtgtgtgcaacagtccacccctccacgacttcctcctcactgctgcagacata
ctggacctgtgcttgagcgtcaaactggtggttctgaggttgtacccagagtccagctgc
agggtgtcggccgacggggtggtgggtctgacccgggccttcttggctgccggggtccag
tgtgtgtgcgtgtccctgtggcctgtaccgatagctgcgtccaaactgttcacgcacacc
ttctacacggcgcttctcaacgggaccaaagccagcgccgctctgacggaggccatgaag
acgctgcagagcagcaagcacttctcgcatccgtccaactgggccggttacatgctgatc
ggcagcgatgtgaagctgaacagtccgatgtcgctggtgggccaagccctggcagagatc
ctgcagtacccagagagagccagggacgccctccgagtgctgctgcacctggttgagaag
tctttgcagcgtattcagagcgggcagtgtaacccgatgtacacgtcgcagcagagcgtg
gagaacaaggtgggtggggtgcccgggtggcaggccctcctgtctgcggtgggtttccgg
ttggacttctctggcagcggtgccggcctccctgcggcggttttcttccccacctcggac
cccggggatcggctgcagcagtgcagcaccactctccagtctctgctcggtctcactcct
ccagctctgcaggctctctgtaaactggtcacaacatccgaggccggagagcagctcatt
cacaagctccaccaggtcctcgtgcagctgcagtcgggcgacaaagaacaagacttttct
ctggctcccattcaggtgtcgataagcgtgcagctctggaggcttccaggctgtcacgag
ttcctggctgcactcggtttcgatctctgcgaggtcggtcaggaggaagtcgtcttgaag
actggaaagcaggccagcaggcgcatcatgcatttcgctcttcagtctcttctcgcgctc
ttcgactccacagagcttcccaagcgtctgagcatggacagttcgtcctccctggagtcc
ctgtcgtcctcccagtcggcctcccagcctcactccttacccctctccttcggctgttac
ccgccccagccctccttcttacccccggtctgccccgacaacctctcctgcgacgccatc
tccgtctacagcctcagctccctcgcctcctccctcagtttcctgtcccgacccgagcct
gcgggaagcgacatcatcagccagcgctcgcaccagcaggacgtagacagacctcgcggc
ctctacgcctcgcaccgccactcgggcggcctgcagagaggtcgactgaccaatcacgga
ggaggaggattggcaggagaaggggaggacgaggagtacgaggggtactccattatcagc
agtgagccgttagggcgagggaggagggagtgcgacactctgccgctgcctgccgggcac
agacaaggccgaggcggcgctgggagagggtctgccggcggtcacgggtaccccgtcaca
gtttcctccaagggaagcatcagcacacctacgtctccgatcaaagctccgccgctgccg
ctgaaagttcccagcagccccaaacccaaacaggaaatctcatctcctcagaggaccggc
aaaggaaaggtcagcagctctgagtcggaccagtccagtaccgagacggacagcacggtc
aagtctcaggaggagaggacggtccccgcgggacaactcgatcctcaggaactggcccag
aagatcctggaggagacccagagccacatgcaagctgtggagagcctgcagaaagcaaac
attagagggaagacggcgagagggcccgaggggaggcaggaggcacacggcaagcagacc
tctctgtctacacccgcaaccccgactctgacgcccactggaggtgcacgagggtttcag
ccgtcagagacgagcgcgttcagcagaccgcccagcagagcgagtctgaaggcgtgctcc
tctcctctttccttccctagtcacctttcacccgtctccacttctgtttcaacacctccc
ccaactcggcctaaaccgccgtcccgctcgtcgtcgctgcagaaaatcagctcgggctac
agcagcccagctcactcgtctccttcgttatctctctctgtgaaggagcaggcttccccc
gacgtgcactcgcaggctcagatcaaactgaaataccctacctcaccttacaccgcccac
atctcaccttcccactctcccgccggcagcgccccgtcgccgtctctttcgtactcctcc
acgggatccgtctcggcgtcgtccagcccggcgaacacccccgaactaaaccagtccaga
catgataataaagtccaggcgattcataatttaaaaaccttctgggccaacgctggccag
aaacacgacgtgccctgtcctgccagtttactccgaggtgggaataaaaaaatgagtaca
gttcagaaagatgttttgggtttgcttaatctctcgccgagacacgagtccgccagcaag
aacggagagtcacccgaggagcgcaacactgacgacaggccgaacggtcaccaaaaactg
gaggccaaacctccaccacctccaacaaactctaaaggaggcatcaaactcccctctggg
aacggctacaagttcctctcacctggacacttctttccatcgtctaagtgttga
DBGET
integrated database retrieval system
