Larimichthys crocea (large yellow croaker): 104934948
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Entry
104934948 CDS
T04659
Symbol
rrp1b
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104934948 (rrp1b)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104934948 (rrp1b)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104934948 (rrp1b)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104934948 (rrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
104934948
NCBI-ProteinID:
XP_027146829
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All DBs
Position
XVIII:complement(21098570..21122350)
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AA seq
912 aa
AA seq
DB search
MAAVPEPEVQFAQRLASNEKPTRTKAMKKLRKYINVRSGGFTGDELLKLWKGLFYCLWMQ
DKPLLQEELSRQISSLIHSFQDVDGQVLYLESFLQTFKREWTGIDRLRMDKFFQLVRFMF
RQTFEMLKRKNWESSVVGRFLELLTVQLLQSGSDAPSGLQLHILDLYMTELAAVGSAELT
ADQNLTFIQPFCKTAARTKDRTLFRAICNSIFSTIIDQAPFAIEDLMEELKGAEASDSDS
GQASEEEEDEKMTSKPGGKKRTRKQINGKKPKEEDDEDEDEDDDDLLHLEDSDTEAPCDE
DVGPVLQFDYAALANKLFELASRSNTPSQNRQRLYKIIKVLRDLSEGVFPQDEYPEDVST
DEDDEMFGSRKRMKKRGRHMEVDEEGAPATKKSKGKKKEASTLNQQEKDPAKDDDEPADL
TTNNEKKKKRKKKKKKKNEGQGGEKAEGSEQEQVVDDGSQKDAPMQSSISSVKVTEAGSE
TVIVSEVRKQPSVKVTEETSQQAPGTNDDNEPSEKSSDADVTTSGKKKKKKKKKKLQTDG
IVAESQVEEESSETNMTPEADTTTPAKKTKNNGVSTEDDGSTTAKKSKKKNLKAVEADAK
QTDPEITSACEDATADATEMSFTKKTKKKTKQEDATLEAPDESAATPLKKKKRKNNKGST
VEEEGEAAVEETPQVADAEKLLVTMTTPAKKKKAPAAAQVDEIKDQTQVEVVGGEDAELP
PDNVLTSSGKLAKKKKRKIPVVFEFEADEVEAAAAFNGVAEEETMVKKTKLATDAGEPSI
PLSAKKSQKKAKASFISFKSKAAVPTPLFCKTKGGLSMPRSGKKKSQTPKSESKKVTFGL
KNNKTAEFRKTDRSLLVSPDGSSRVPFDPKQKPKFGVLKSPATPVSSKKTPNGTRKAGAG
TPKRRPSAADFF
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttccggagccagaggtccagttcgcgcagaggttagcgtccaacgagaag
cccacccggaccaaggccatgaagaagctgcggaagtacatcaacgtccggtcaggtggg
ttcacaggtgacgagctgctcaagctgtggaaaggtctcttctactgcctgtggatgcag
gacaagcctctgctgcaggaggagctgtcgaggcagatctccagcctgatccacagcttc
caggacgtcgatggacaggttttatacctggagagtttcctgcagacctttaagagagag
tggacgggcatcgaccggctgaggatggacaagttcttccagctggttcgcttcatgttc
agacaaacctttgagatgctgaagaggaaaaactgggagagcagtgtggtcggccggttt
ctggagctgctcacggtccaactcctgcagagtggcagcgacgcgcccagcggcctgcag
ctccacatcctggacctctacatgactgaactggcagctgttggttcagcagagctcact
gccgatcagaacttgacgttcattcagccattctgcaaaacagcagccagaaccaaagat
cggactctcttcagagccatttgcaacagcatcttcagcaccattatcgaccaggcgccc
ttcgctattgaagatttgatggaggagttgaaaggagccgaggcttcagactccgactcg
gggcaggcgtctgaagaagaagaggacgagaaaatgacgagcaaaccaggcggcaagaag
agaacgaggaagcagattaacggtaagaaaccaaaagaagaggacgatgaggatgaggat
gaggatgatgacgaccttcttcacttggaagactctgacacggaggcgccatgtgacgaa
gatgttggaccggtcctacagtttgactatgcggctctggcaaacaagctgtttgagtta
gccagtcggagcaacacgccgagccagaaccgacagagactctacaagatcatcaaagta
ctgcgagacctcagcgaaggcgttttcccacaggatgagtatccagaagatgtctccacc
gacgaggatgacgaaatgttcggcagcaggaagaggatgaagaagagaggacgtcatatg
gaggtagatgaggagggagctcccgcaaccaagaagagtaaagggaagaaaaaagaggca
tctacactcaaccagcaagaaaaggaccctgcaaaagatgacgatgaaccagccgaccta
accacaaataacgaaaaaaagaaaaagaggaagaagaagaagaagaagaagaatgaaggg
cagggtggagagaaagcagaggggtctgaacaggaacaggtcgtggatgacggttcacaa
aaggacgctccgatgcagagttccatctcgtctgtaaaagtgaccgaagcagggtcagaa
actgtgatcgtctctgaagtccggaaacaaccttcagttaaagtcacagaagaaacgagc
caacaagctcccggcacaaatgacgacaatgagccgtctgagaagtcgtccgacgctgat
gttaccacctcagggaagaagaagaaaaagaagaagaagaagaagttacaaacagatggg
atagtggctgaatcacaggtcgaagaagagtcatcagaaacaaacatgacacctgaggcc
gataccacaacccccgccaagaagacaaagaataacggtgtgagcaccgaagacgacggt
tcaactactgccaagaagagtaagaagaagaacctgaaggctgttgaagctgatgcaaaa
cagaccgaccctgaaatcacatcagcctgtgaggacgcgacagcagatgccactgaaatg
tctttcacaaagaagacgaagaaaaagaccaagcaggaggacgcaacactcgaagctcca
gatgaaagcgctgcaacgccactaaagaagaagaagaggaaaaacaataaaggatctaca
gtggaagaggaaggagaggcggcggtggaggaaacccctcaagtggcggatgctgagaaa
ctgctggttaccatgacaacgccggcaaaaaagaagaaggctccggcagcagcccaagtg
gatgagatcaaagatcagacgcaggtggaggtggttggtggtgaagacgcagagctccca
ccagataatgttttgacttcctctgggaaactggccaagaagaagaagaggaagatccct
gtggtgtttgagtttgaggccgacgaggtggaggcggcagcagcgttcaacggcgttgcc
gaagaagagactatggtgaagaagacaaaacttgccaccgatgccggagagccatccata
cctctgagtgcaaagaagtcacaaaagaaggcgaaggcttccttcatcagctttaagagc
aaagctgcagtcccaacaccgctcttctgcaaaaccaagggcggcctgagcatgccacgg
tccggcaagaagaagagtcaaactcccaaatcagaatccaagaaggtgaccttcgggctc
aagaataataagactgctgagtttagaaagactgatcgcagcctgttggtgagtcctgac
ggctcgtcacgagttccctttgacccgaagcagaaacccaagtttggggtcttgaagtct
ccggccacaccggtctcctccaaaaagacccccaacggcacgaggaaggccggtgccggt
acgcctaaacgacggccgtcagcggcggacttcttctga
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