KEGG   Larimichthys crocea (large yellow croaker): 104935066
Entry
104935066         CDS       T04659                                 
Name
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    104935066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lco03036]
    104935066
Enzymes [BR:lco01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104935066
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     104935066
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln fn1
Other DBs
NCBI-GeneID: 104935066
NCBI-ProteinID: XP_019118150
LinkDB
Position
Unknown
AA seq 1106 aa
MTSHSHQEGILGKEQPLEVLKTSALNHIPTVDINSALPLRLPPAAIPMDLRVDHHQHQQQ
QQQQVSSLSPPGQQSSSPGLMGGTGQAGGGGGGGVVGASVREQQLQQELLTLKQKQQIQR
QILIAEFQRQHEQLSRQHEAQLQEHIKQQQELLALKHQQELLEHQRKMENHRLEQELEKQ
QREQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNQGGLPNDAPYWYRK
TQHSSLDQSSPPQTGVSTYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSS
PLLRRRDSPITTAKKRSLDMADSACSSAPGSGPSSPNNSSNNIPNENGITVSVSNNTEAS
LAQRLCSGAERGSVNQLSLYTSPSLPNITLGLPATATATAASNVTSTQQDGGLQPALSLS
PPFLSGGHLTPYLAEGGAGTGGHGAHSPLLQHMVLMEQSPAQSPLVTGVSGLSMSPAASM
AKLQRQHRPLGRTQSAPLPQGSAAQAHAQALALQQLVVQQQHQQFLEKHKQQFQQQQLHL
NKMMAKPGDSPVGRQHQSHPEETEEELREHQDGAVLPAGVTIKQEPPDPQELQEEALQQQ
HRERERQAEQELLFRQQALLLEQQRIHQLRNYQASMEAAGLSISFPGHRPLSRAQSSPAS
ASSFPISVPASDPPSKPRFTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETG
LRAQCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGVGVDSD
TIWNEVHSSSAARLAVGSVVELVFKVATRELKNGFAVVRPPGHHAEESTPMGFCYFNSVA
IAAKLLQQRLNVNKILIVDWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFPGSGAPDE
VGSGPGVGFNVNVAFTGGLDPPMGDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGH
PPPLGGYTLTSKCFGYLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLGQELDP
LPKAVLEQRPNPNAVRSLEKVLETHSKYWRSVHRYSPRLGLSLLEAKRGDSEEAEAVSAM
ASLSVANTNAMDQRPEEEPMEEEEPL
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgacatcacacagccaccaagaggggatcctgggaaaggagcagccactggaggttctg
aagacatcagcgctcaaccacatcccaacagtggacattaactcggcgctccccctgcgt
ctccctccggccgccatccccatggacctgcgcgtggaccatcaccagcatcaacagcag
cagcagcagcaggtgtcctcgctgtccccgcccgggcagcagtcgtccagcccggggttg
atgggcgggacgggccaggccggcggtggcgggggcggcggcgtggtcggggcctcggtg
cgcgagcaacagctgcagcaggagctgctgaccctgaagcagaagcagcagatccagagg
cagatactcatcgcggagtttcagcggcagcacgagcagctgtcccgtcagcacgaggcc
cagctccaggagcacatcaagcagcaacaagagctcctggcgttgaagcatcagcaggag
ctgctggagcaccagaggaagatggagaaccaccgcctggagcaggagctggagaagcag
cagagggagcagaagcttcagctgctgaagaacaaggagaggggacaagagagcgccgta
gccagcactgaggtgaagatgcggctccaggagtttgtcctgaacaagaagaaagccctg
gcccagcggagcctcaaccaaggaggcctcccaaatgacgctccctactggtaccgcaaa
acccagcacagctctctggaccagagctcgcctccgcagaccggcgtgtccacctacaac
cacccggtgctgggcgtctacaacccccgggatgacttcccactgcgaaagacagcctcg
gagcccaacctgaagcttcgctccaggctgaagcagaaggtgagcgagcggaggagcagt
ccgctgctgcgacgtcgcgacagccccatcaccaccgccaagaagcgctcactcgacatg
gcagactctgcgtgtagcagcgcccccggctcaggcccgagctccccgaacaacagctcc
aacaacatccccaatgagaacggcatcactgtgtcagtctccaacaacacggaggcgtcc
ctggcccagaggctgtgcagcggtgctgagcgtggctccgttaaccagctgtccctctac
acttcgccatccttacccaacatcaccctggggctgcccgccacagccacggccacggct
gcttccaatgtgacgtcgacgcagcaggacggaggtctgcagccggcgctctccctcagc
cctcctttcctctccggcggccacttgaccccttacctggccgagggcggagcggggacg
ggcgggcacggcgcacacagtccactgcttcagcacatggtgctcatggagcagagcccg
gcgcagagccccctggtgacaggtgtgagcggtctgtccatgtccccggcagcgtccatg
gccaagctgcagcggcagcaccggcctctggggcgaacccagtcggcccctctgcctcag
gggagcgccgcccaggctcacgcccaggccctggccctgcagcagctggtggtccagcag
cagcaccagcagttcctggagaagcacaagcagcagttccagcagcagcagctccacctt
aacaagatgatggccaagcccggcgactcccccgtgggccgccagcaccagagccacccg
gaggagacggaggaggagctgagggagcaccaggacggagcggttctgccggcaggggtc
accatcaagcaggagccccccgacccgcaggagctgcaggaggaggcgctgcagcagcag
cacagggagcgggagaggcaggcggagcaggagctgctgttcagacagcaggccctgttg
ttggagcagcagcgcatccatcagctgagaaactatcaggcctccatggaggctgccggc
ctgtccatctccttcccgggacaccgcccgctctccagagctcagtcgtctccggcttca
gcgtcctccttcccaatcagcgtcccggcgtccgaccctccctccaaacctcgcttcacc
acaggcctggtgtacgactctctcatgcagaagcatcagtgtatgtgtggaaacaccaac
agccacccggagcacgccggccggattcagagcatttggtctcggctgcaggagaccggg
ctgcgagcgcagtgtgagtgtatccgtgggaggaaggccacgctggaagagctgcagacg
gttcactctgaagcccacgtcctgctgtacggcaccaaccctctcagacagaaactcgat
tgttcaatcactccgatgttcgtgcggctgccgtgtggaggagtcggggtggacagcgac
accatttggaacgaggtccactcctccagcgccgcccgcctcgccgtcggctccgtggtg
gagctcgttttcaaagtggccactcgagagctgaagaacggtttcgctgtggtccgccct
cctggacaccacgccgaggaaagcactcccatgggtttctgctacttcaactctgtggcc
atcgcagccaaactgctgcagcagagactcaacgtcaacaagatcctcatcgtggactgg
gacgttcaccacggcaacggcacccagcaagcgttctacgacgaccccaacgtcctctac
ctgtcgatccatcgctacgacgacggcaacttcttccctggaagcggagcacctgacgag
gtgggcagcgggcccggagtcggcttcaacgtcaacgtcgccttcaccggaggcctcgat
ccacccatgggagatgcagagtacctggctgccttcaggtcagtcgtgatgcccatcgcc
aacgagtttgctccggacatcgtgctggtctcttcgggcttcgacgccgtcgagggacac
cctccgcccctgggcggctacactctgacgtctaagtgttttggctatctgaccaggcag
ctgatgactctcgccggaggccgggtggttctggctctggagggaggtcacgacctcacc
gccatctgcgacgcctccgaggcgtgcgtggccgccctgctaggccaggagctggacccg
ctgcccaaggccgtcctcgagcagagacccaaccccaacgctgtccgctctctggagaaa
gttttagagactcacagtaaatactggcgctcggtgcatcgttactcgccgcggctcgga
ctttccctcctggaggccaaacgaggagactcggaggaggccgaggccgtcagcgccatg
gcttctctgtccgtggcaaacaccaacgccatggatcaaagaccggaggaggagccgatg
gaggaggaggagccgctgtaa

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