Larimichthys crocea (large yellow croaker): 104935079
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Entry
104935079 CDS
T04659
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04080
Neuroactive ligand-receptor interaction
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104935079
04082 Neuroactive ligand signaling
104935079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104935079
Ion channels [BR:
lco04040
]
Ligand-gated channels
GABA-A
104935079
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
104935079
NCBI-ProteinID:
XP_027130163
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Position
III:46178417..46214188
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AA seq
459 aa
AA seq
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MAFSVSGGTVFTILLISRLLESSMLNAEVKEGEILPPTIQRLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTHADAHMLMYGHHVHDFEDEVNGIVTTIST
HARAKRRKEPASTPTPAQTTLELTVSPSSPSGSEPKPEVSPPETTNWCLTALATVRKVLR
TIYCCHVENPHHIDNYSRVSFPLSFVMVNLLYWTYYLYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctttctctgtatctggaggaactgtgttcaccatccttctcattagcaggttgtta
gagagctccatgctcaacgcagaagtaaaagaaggagagattttgcctcctaccattcag
aggctgatgaaaggatacaacaagtacctcaggcctttctttgacaatggtcctgtaacg
gtgggtatgagcctggacattgccagcattgacaccatctcagagatcaacatggactac
accgctaccatattcctccgtcagcgctggaccgatgagcgcttggtgtttgagggcaat
aagagcctgagcctcgacgggcgactagtggagctgctgtgggtccctgacacttttatc
gtcgactccaagaagtccttcctccatgacatcaccgtggagaacaggctgatccgcatc
ttccccaacgggaccgtcctttatgcactgaggattaccaccactgtggcttgcaacatg
gatctgactaaatatccaatggacaagcagacctgcacgctacaactggagagctgggga
tacaacatcaatgatgtcatgttctactggaccagaggaaatgagtctgtcagtggttta
gacacgctacagctggctcagtacacggtagaggaccactacacatccgtctcagaggcc
gtttatgagactggcaattacccaaaactggtcttccactttgagctgaagaggagcatt
ctgtacttcatcttagagacttacgtcccctccagcctgcttgttgtcctctcatgggtt
tccttctggatctccctctcctctgtccctgcacgtatttgtataggagtgaccaccgtg
ctgaccatgaccactctgatgatgggagcccggacgtcactgcccaatgccaactgcttc
atcaaggccattgatgtttacttggggatctgcttcagctttatctttggagcgctcatt
gagtacgccgtggctcacttctgcaccctcactcacgctgacgcacacatgctaatgtac
ggccaccacgtgcacgacttcgaagacgaagtgaacggcatcgtcaccaccatctccact
cacgccagggccaagaggcgcaaggagcctgcctcaactcctaccccagctcaaaccact
ctagaactcactgtcagcccgtccagcccctcgggcagtgagcctaagcctgaggtgtca
cctccggagaccaccaactggtgcctcactgctttggctaccgtccgcaaagtgctccgc
accatatattgctgtcacgtggaaaacccccaccacatagacaactactccagagtctcc
ttccccctctcttttgtcatggttaatctgctctactggacgtattacttgtacttttag
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