Larimichthys crocea (large yellow croaker): 104935235
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Entry
104935235 CDS
T04659
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104935235
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104935235
NCBI-ProteinID:
XP_027146330
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Position
XVII:7292437..7327902
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AA seq
2156 aa
AA seq
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MAAVGVLLLLALAVVCGGRRLVEVNSGVQVIRGRSAFITEKELKISEDPTADCKVEVVMN
EPVTQRVGRLTPQVFDCSFLEDEVKYIHNGSPQLDEDSVMLRVYRFTSSDTLVETVLLPV
RVVDSGSGVVELGSAPLVVPQFYALSNAIDSSILNIRTTSDLVCTIRLMTTDTSVPALGQ
LVREEDSTQRKGRETAALCPGNKPCLHDTKEVRFLKTSCQDFLSSGLKYQHLSPPSPEID
YIPIRVELREQATRALLEAESVWLPVLIHGAMQNQPPQAAFMASFILEVDQFILTPLTTA
ALDAKDHETPQERLVFNVTAPPAEGYITHLDDHTKPITSFTWLDLHEMKVAYQPPNSSQS
QRRNYEMEFQVIDGSYVTSPPIMVHISIRAAETNAPRVSWNMGLDLLEGQSRPITWEELQ
IVDSDNINAVYLVAVDGPLHGRLSVRGGKAFMFRVRDLREGAVVYHHSDSDTTRDHIVFR
ISDGRHSIRHKFPINILPKDDSPPFLINNVAVEVQEGGAVRLEEYMLLASDLDSSDDYIL
YQVVSSPRAGQLVRKTSTHETGAPVDSFLQRDLIQGQIYYQHSGDEQFEDSFDITLSDSH
HPPNLSQTYTVVVQVFPVKDQLPVEVSGSVRSLTVKETEVVYVTPAHLHFTDREHPDTDL
TYVITQPCFSPLHAGLMDAGRLFYTDSTNSMKKDHMVPVLKSFTQHAVNHMKVAFMPPVE
DIGPEPLFVQFVFSVSDHHGGTVSGLVFNITVTPVDDQAPEAFTNLLRVEEGGGAFVTEE
HLLVQDRDSREEVLRVEVQRMAHHGRLELQGRALQSGDRFTLQDLRGLRLRYIHDDSETT
EDEVYLKVTDGLNSVQVVLLIQVLPMNDEPPQLGGGLRGELTCQEGGRVQVTVDYLSATD
RDSDDSRLTYMLARSPGRGELQRAGLTVDKFSQQDLLQGHIYYAHTGGEIGPEPAFDTVT
LIISDGETGGTDGCCHGDAPPPPVPLHGTLPVYDLNVTVLPVNNQVPAVTLGESMLVVDE
GSSACLCGGVLGASDPDTPPDQLTFHLETPPLHGFLENTLPPPGSEKSNAGVRVESFSLI
HLTSGFINYVQSESKGVEPTVDQLTISVSDGLHRSAPVPFYIIINPTNDETPSLVLANFT
VKEGGMRELTPSILNGFDLDAPLDILTFTVIQPPVHGSLINGIYGTEMSRYKEMGADLLQ
RSLPVTSFTLQELRQGMKIVYMHDDTETLKDTVALWLTDGVHTVQGTAQVTVLPVNDEKP
RLLKNAGLEVNSGERRVISSVVLEAEDLDTPPNQVYYFLNAEPRFGKLQLKTESGWIELS
AGQNFTQDDVEMNRLWYVHTSATNAAGFKGHDSFRFTLSDLDNETPTQSFFMSVHAVQKG
DLVLLSKAVSLTEGQRVVLNTDILLASDSSGRPEELVYTVTVPPGHGLVHAVQQPGVPLM
SFTQLDVAAHRVCYTHDNSHHAETDAFSFVVTNGDSSRSGTLHFTIQHGDRIPPTLHHNT
GLRLQDGSTETITTDQLQLTDPDTAVANLSFAITRLPLYGRLLLREVPLSAPLSFTQTDV
DELNLSYQHDLVSPAEIDRFYFLPTDGTNRGYLEFGQLREEPAVFNIQVDRVDRTPPSLT
TRQSPSVVVDLGGGRYGIFITSKHLQASDPDSPTEELEFSITRPPHFGYLENALTGAYIK
GRFTQRDVDQRTVVFVLPADMEVTADSFQFLLTDPAGNTALPEILELSWSRVELSATCYR
TCETAGTLQIQIQRNGKSADPAYVAIQVEEGSAKPGRDFTHSTAGLIQFDPGVSVKTWNI
YLIDDGLEENHETFTVTLKNPKNAVLGQRTSASVEIIDPRGGRCDPDDLRVEDDEKRLPA
PPRLPDPPRPEKEEEVEDPVTDIEAELLWENQPQPPRGDVPNRRPYLDYGVQDPQDQAAS
SYSQIYYPSRQLPGTGTGGTGHRVRHGGLKVRLSGERRTEEKVWTFHSLTPLRLEELKPG
DVGWSQSPQSRLLQEVPVGDPPQMDHAEPRHHPELRQRKTEKSVSSSCPDGSTHYRRRCY
IISSSVASWASAERTCSLLFNSSLTSVRSRRDMSWLWRFAGRKPFWIGLSGGPGHWMWAD
GQPVSFSRLKGAPLGRSESDAGPDCVLVENPRSWISTSCSPETQHRFICSAPAQTH
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtcggcgtgctcttgctgctggcgttggcggtggtctgcggtgggcgtcgc
ctggttgaggtgaactcgggcgtgcaggtcatcagaggccgatcagcgttcatcacagag
aaggagctgaagatcagcgaggatcccactgcagactgtaaggtggaggtggtgatgaac
gaacctgtcactcagagagtggggaggctgactccacaggtgtttgactgcagcttctta
gaggacgaggtgaaatacatccacaacgggagtcctcagctggacgaggactcagtgatg
ctgagagtctacaggttcacgtcctcggacacgctggtggagacggtacttctccctgtg
cgggtggtggactcaggttctggtgtggtggagctgggcagcgccccgctggtggttcct
cagttctatgctttatccaacgccatcgacagctccatcctgaacatccggaccacgtca
gacctggtctgcaccatcaggctgatgaccaccgacaccagcgtccctgctctgggtcag
ctggtcagggaggaggactccacacagaggaaaggcagagagacggcggcgctctgtccg
gggaacaaaccgtgtcttcacgacaccaaggaggtccgtttcctcaaaaccagctgccag
gacttcctgagctccggtctgaagtaccagcacctcagccctccatcaccagagatcgac
tacatccccatcagggtggagctgagggagcaggccaccagggcgctgctggaggcggag
tcggtgtggttgccggttctgatccacggtgcgatgcagaaccagccgccccaggccgcc
ttcatggcctccttcatcctggaggtggaccagttcatcctcaccccgctcaccaccgcc
gccctggacgccaaagaccacgagacgccgcaggagaggctcgtcttcaacgtgaccgcc
ccgcctgccgagggctacatcacacacctggacgatcacacgaagcctatcacgtccttc
acgtggctggacctccatgagatgaaggtggcctaccagcctcccaacagcagccagtca
caacgcaggaactatgagatggagttccaggttatagacgggtcctatgtgaccagcccc
cccatcatggtccacatctccatcagggcagctgaaacaaacgccccccgagtctcctgg
aacatgggtttggacctgttggagggtcagtccagaccgatcacatgggaggagctgcag
atcgtcgacagcgacaacatcaatgctgtctacctggtggccgtggacggacccctgcat
ggacgcctcagtgtcagaggcgggaaggcgttcatgttccgtgtgcgggacctgagggag
ggcgccgtcgtctaccatcactctgacagcgacaccacccgcgaccatatcgtcttccgc
atcagtgacggccgtcacagcatccgccacaagttccccatcaacatcctgcccaaagac
gactctccgccgttcctcatcaacaacgtggcggtggaggtgcaggagggcggcgccgtg
aggctggaggagtacatgctgttagcctctgacctggactccagtgacgactacatcctc
taccaggtcgtctccagcccccgggcggggcagctggtcaggaagacctccacccatgag
acaggagctccggtggacagcttcctgcagagagatctgatccagggtcagatctactac
cagcactcaggagacgagcagtttgaagactccttcgacatcacgctgtccgacagccac
catccgcccaacctctcccagacatacaccgtggtggtccaggttttcccggtgaaggac
cagctgccggtggaagtgtccggcagcgtccgctctctgacggtgaaggagacggaggtg
gtttacgtcaccccggctcacctccacttcaccgacagagagcatccagacacagacctg
acctacgtcatcacgcagccctgcttcagcccgctgcatgctgggctgatggacgcagga
cgtctgttctacaccgacagcaccaactccatgaagaaagaccacatggtgccggtgtta
aagtccttcactcagcatgcagtgaaccacatgaaggtggccttcatgccccccgtggag
gacatcggcccggagccactgttcgtccagtttgtcttctccgtcagcgaccaccacggc
ggcaccgtgtccggcctcgtcttcaacatcaccgtcacccccgtggacgaccaggcgcca
gaggccttcactaacctgctgcgagtggaggagggtggaggcgccttcgtgactgaggag
cacctcctggttcaggaccgtgacagccgggaggaggtgctgagggtggaggttcagagg
atggctcaccatggccggctggagctgcagggccgagcgctgcagtcaggagacagattc
accctgcaggacctgagaggactccggctcaggtacatccacgatgactctgagacgacg
gaggatgaagtttatctgaaggtgacggacggtctgaactcagtccaggtcgtgctgctg
atccaggtcctaccgatgaacgatgaacctccccagcttggcgggggtcttcgcggggag
ctgacctgccaggaggggggccgggttcaggtaacggtggactacctgtcggccacggac
cgggacagcgatgactccaggctgacctacatgctggcccggagtccaggccgaggggag
ctgcagagagctggactgaccgtggacaagttctcccagcaggacctgctgcagggacac
atctactacgcccacacaggaggagagatcggacccgagccggcgttcgacaccgtcacc
ctgatcatctctgatggagagaccggcggcacggacggctgttgtcatggagacgccccg
cctccacccgtacctctccacggcacacttcctgtgtacgacctcaacgtcaccgttctt
cccgtcaacaaccaagtccccgccgtcactctgggtgagtccatgctggtggtggacgag
ggctcctccgcctgtctgtgtgggggcgtcctgggcgcctcggaccctgacactccccct
gaccagctgacctttcacctggagactccgcccctgcacggcttcctggagaacacgctg
ccgccgcccggctccgagaagagcaacgcaggagtccgagtggaatccttcagtctcatc
cacctgacctccggtttcatcaactacgtccaatcagagagcaaaggggtggagccaaca
gtcgaccagctgaccatcagtgtgagtgacgggctgcaccgctccgcccccgtccccttc
tacatcatcatcaatccgaccaatgacgagacgccgtcgctagtgctcgccaacttcacc
gtgaaggagggcgggatgagggagctgactccctccatactgaacgggttcgacctggac
gccccgctggacatcctgaccttcacggtgatccagccgccggttcacggcagcctgatc
aacgggatctacggcaccgagatgagccgctacaaagagatgggagctgacctcctgcag
aggagcctccccgtcacctccttcaccctgcaggagctccgacagggcatgaagatcgtg
tacatgcacgatgacacggaaaccctgaaggacaccgtggctctgtggctgacagatggt
gtccacacagtccaggggacggctcaggtcaccgtgctgccggtcaacgacgagaaacca
cgactgctcaagaacgctgggttggaggtgaactccggtgagcgcagggtgatctccagc
gtggttctggaggccgaggacctggacacccccccaaaccaggtgtactacttcctcaat
gctgaaccacgctttggcaaactgcagctgaagactgagtcgggttggatcgagctgtcg
gctggtcagaacttcactcaggacgacgtggagatgaaccgtctgtggtacgtgcacacc
tccgccaccaacgccgctgggttcaaaggtcacgacagcttccgcttcaccctcagtgac
ctggacaacgagacgccgacccagagcttcttcatgtccgtccacgcggtgcagaaaggt
gacttagtgctgctgagcaaggcagtgagtctgacggagggtcagcgggtcgtcctgaac
accgacatcctgctggcgtcagactcgtccggccgtccggaggagctggtctacacggtg
acggtcccgcctggacacggcctcgtccacgccgtccagcagcccggggtcccgctgatg
agcttcacacagctggacgtggccgcacaccgagtgtgttacacccacgacaacagccac
cacgccgagaccgacgccttcagttttgtcgtcaccaacggcgactcatcacgaagcggc
accctccacttcaccatccagcatggcgaccgcatcccgcccacgctccaccacaacacg
ggcctgcgtctgcaggacggctccacggagaccatcaccaccgaccagctgcagctcacc
gaccccgacaccgctgtcgccaacctgagcttcgccatcacgcggctgccgctctacggc
cggctgctgctgagagaagtcccactgtcagcgccgctgagcttcacccagacggacgtg
gatgagctgaacctgtcttaccaacacgacctggtcagcccggcggagatcgacaggttc
tacttcctgccgaccgacgggaccaacagaggatacctggagtttggacagctgagagag
gaacctgctgtcttcaacattcaggtggatcgggtggaccggacacctcccagtctgacc
accaggcagagtcccagcgttgtggtggatctgggcggagggcgttacggcatcttcatc
acctccaaacacctgcaggcctccgaccccgacagccccacggaggagctggagttctcc
atcaccagaccgccgcacttcggctacctggagaatgctctcacaggagcttacatcaaa
ggtcgtttcacccagcgggacgtggatcagcgcaccgtggtgttcgtcctcccggccgac
atggaggtgacagccgacagcttccagttcctcctcaccgacccagcgggaaacacggcg
ctgcctgagatactggagctgtcctggtctcgggtggaattgtcagcgacctgctacaga
acctgcgagacagcggggacgcttcagatccagatccaacgcaacgggaagagcgctgac
ccggcgtatgtcgcgatccaggtggaggaaggatcggccaaacccggcagagatttcacc
cacagcacagctggtctgatccagtttgacccaggagtcagtgtgaaaacctggaacatt
tacctgatagacgatggtctggaggaaaaccacgagaccttcactgtcaccctgaaaaac
cccaaaaacgccgtcctgggacagaggacgtctgctagcgtcgagatcatcgaccccaga
ggaggaaggtgtgatccagacgacctgagggtggaggatgacgagaagcgactcccagct
cctcctcgccttcctgaccctcccagaccggagaaggaggaggaggtggaggaccccgtc
acggacatcgaggcggagctgctgtgggagaaccagcctcagcctcccaggggagacgtc
ccaaacagacggccctacttagactatggagtacaagatccacaggaccaggcggcctcc
agctacagccagatctactaccccagcaggcagctgccagggacgggtactggggggact
ggacacagggtcagacatggaggcctaaaggtccgtctgtcaggagagaggaggactgag
gagaaggtctggacgttccacagtctgactcctctccggctggaggagctgaagccgggt
gacgttgggtggagccagtcacctcaaagtcgcctcctgcaggaagtcccagtcggagac
cctcctcaaatggatcatgcagaaccaagacaccacccagagctacgccagcgcaaaact
gagaagtccgtcagcagctcgtgtcctgacggttcgactcattacaggagacgctgttac
atcatcagctcgtctgtggcgagctgggcaagcgccgagaggacctgctcgctgctgttc
aacagcagcctgaccagcgtgcgctccagaagagacatgagctggctgtggaggtttgca
gggaggaagccgttctggatcggtctgtctggaggtccgggtcactggatgtgggccgac
ggtcagccagtgtccttctccagactgaagggggcgccgctgggccgcagtgagtctgac
gcgggcccggactgtgtgctggttgaaaaccccagaagctggatctctacgagctgctcc
cctgaaacccagcacaggttcatctgttcagcgccggctcagactcactga
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