Larimichthys crocea (large yellow croaker): 104935340
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Entry
104935340 CDS
T04659
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X3
KO
K13091
RNA-binding protein 23/39
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104935340 (rbm39)
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
General mRNP proteins
104935340 (rbm39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
104935340
NCBI-ProteinID:
XP_010749473
UniProt:
A0A0F8C142
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Position
XV:complement(22247547..22254897)
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AA seq
500 aa
AA seq
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MADDFDVEAMLEAPYRKDEIKSSHANGHDDQNKKKRRSRSKSRSPGSKKRRSRSRDKKKG
KKRSRSRERKRSRSRERHRSGSRSKERSGRYKARKSPIRKRSKSRSPFKKEKSPIRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVE
ASSVPLAIGLTGQRLLGVPIIVQASQVMAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGNIAAPAAVPAPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPSWAIEIQDDV
IEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPT
YHNLFPDSVTAKQLLMPARR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtagaggccatgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaatggacatgacgaccagaacaagaagaaaaggaggagtcgaagc
aagagccgaagcccaggctctaagaagagaagaagcaggagccgagacaaaaagaagggc
aagaagagaagcaggagccgagaaagaaagcgaagccgtagcagagagcgccatcgcagc
ggctcccgaagcaaggaacgctccggccgatacaaagcacgcaaaagccccatccggaaa
cgttccaaaagtcgaagtcccttcaaaaaagaaaagagtcccatcaggcaaccaattgac
aatctcacaccagaggagagggatgcccgcacagttttctgcatgcagctcgctgcaaga
atcagagcccgagacctggaagatttcttctcggctgtcggaaaagtgagagatgtgaga
atgatctcagacagaaactccaggagatcaaagggcatcgcatacatcgagttcgtggag
gcttcgtctgtaccgctggcgattggattgaccggccagaggcttttaggagtgcccatc
attgtacaggcctcacaggttatggcagagaaaaacagagctgcagctgctgccaataac
ctacagaagggcagttcgggtccgatgcggctgtacgtgggctcgctgcacttcaacatc
actgaagaaatgcttcgagggatctttgagccttttggaaagatcgaaggtatccagctc
atgatggacagcgagaccggacgatccaaaggatacggcttcatatcgtttgcagatgca
gaatgtgcaaaaaaagctctggagcaactgaacggctttgagctggccggtcgtccaatg
aaggtggggcatgttacagagcgctcagactcatcgacagccagctcgttcttggacaac
gatgaactggagaggactggcatcgacctcggcaccacagggcgtctacagcttatggct
cgactagcagaaggaaccggtctaaagatccctcctgctgctcagcaggctctgcagatg
acagggtccataccctttggaaacattgctgctccagcagccgttccagctccagctcca
agtcaagctctgaacctgccatcacagccgctggccacacactgccttcagctgtccaac
ctcttcaacccacaagcagaaaacgatcccagctgggccatcgagatccaagatgatgtt
attgaggagtgcaacaaacacggagggattgttcacatttatgtcgataagaactctgct
caaggtaacgtgtacgtgaagtgtccctcaataccagcagcaatggcaactgtaaatgca
cttcatggacgctggtttgcaggcaaaatgataacagctgcctacgttcctttaccaacc
taccacaaccttttccctgattcagtaacggcaaagcagcttctaatgccggcacgtcga
tag
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