Larimichthys crocea (large yellow croaker): 104935426
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Entry
104935426 CDS
T04659
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104935426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104935426
Spliceosome [BR:
lco03041
]
Complex A
U1 snRNP components
U1 related factors
104935426
Complex B
104935426
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
104935426
NCBI-ProteinID:
XP_010749560
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Position
XXIV:3225537..3235517
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AA seq
825 aa
AA seq
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MSYPPPLNRQQLGLPQLPPRIPPPQYGGFGPTVPPGTPMIPVHMGVVTPTPTVLVPTTIA
VAQKPMAPKKETMRAKDAEDSGGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQG
ASGKLQAFGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLDEWKAKKRSANG
GASGVSKNGDEDEEEVLDEETLRRDQVVKGAIDVLIREYASELNAPSQDPDSQPRNKKRK
EKKEEEDINAMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEKERLEIERERRERDKER
ERERERRDREKEKERERERDKERERDRDRDRERERDRERERTKERERERERERSRDVSED
RSRSRERTRDDKKRDREEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKARDYSK
ETERDDERRREMMKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETELDERDRK
REKEELEEIRQRLLAEGHPDPDAELQRMEEEAERRRQPPLKLEPEEDVSQEKSHKDRDRE
KRGSGRPAEPIPRGPPPPHSDDDDVEPVEDDYHDEEDSQEAKPQPKPIMRPITTAPSVSS
ASGNATPNTPGNESPCGIIIPGENTPEVQPPEEHRPKIGLSLKLGATNSPSQLNVGKRKK
LATVESVFNKFDDEEADEQPRKRKLVPLDYGDDDKSLGLDGAEISGAKGSINTEEKRKHI
KSLIEKIPTARPELFSYPLDWTMVDSTLMDRRIRPWINKKIIEYIGEEEPTLVDFVCSKV
MAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccctcctcctctgaaccgtcagcagctcggcctccctcagttacctcccagg
atcccgccgccacagtacggagggtttgggccgactgttccgccaggtactcccatgatt
ccggttcatatgggtgttgtgacgcccactcccacagttcttgtcccgaccacaatcgcc
gtcgcacagaagccaatggctccaaagaaggagaccatgagagccaaggacgcagaggac
agcggcggcccgaccaccaccgtgtttgtagggaacatctctgaaaaggcgtctgacatg
ttggtcaggcagcttctagcgaaatgcggcattgttctaagctggaaaagggtccaaggt
gcttctgggaaacttcaagcttttgggttctgtgagtataaagagcctgagtcgacgctg
cgagccctcagacttctgcacgagttgctgttgggggataagaagctgttggtcaaagta
gacgccaagaccaaggcccagctagacgagtggaaggccaagaagaggagtgccaacggg
ggagccagcggtgtgtcaaagaacggggatgaagacgaggaggaggtcctcgacgaagaa
accctgcgtcgggaccaggtcgtgaagggggcgatagacgtcctgatccgagagtacgca
agtgaactgaacgctccctcgcaagaccccgacagtcaacctcgcaacaagaagcggaaa
gagaagaaagaggaggaggatatcaatgccatggagatggaggatgacaagagagacttg
atttccagagagatcagtaaattccgcgacacacacaagaaactggaggaggaaaaagga
aagaaggaaaaggagcgactggagatcgagagggaaaggagagagagggacaaagagcgg
gagcgcgagagggaacgccgcgaccgggagaaagagaaggaaagggagagggagagggac
aaggagcgggaaagagacagagatcgcgaccgcgaacgggagagggatcgtgaacgggag
aggacgaaggagcgcgagagggagcgcgagagggagaggagtcgagacgtcagcgaagat
cgcagcagatcgagagagaggaccagagacgataaaaaacgagaccgcgaggaagatgaa
gaggacgtgtacgaacggaggagactagagaggagactccgagacaaggaggcggcttac
caagaacggctgaaaaactgggagatcagggaaaggaagaaggctcgtgactacagcaaa
gaaacagagagggacgacgagaggcgtcgtgaaatgatgaaagaagcaaaaagactgaaa
gaattccttgaagattacgacgacgacagagacgacccaaaatactacaggggcagcgct
ctgcagaagagacttcgtgacagagaaaaggagacagaattggacgagcgagaccggaag
agggagaaggaggagctggaggagatcagacagaggcttctggctgaaggtcaccctgac
cccgatgccgagctgcagaggatggaggaggaggcagagcgcagacgacagcctcccctg
aaactcgaacccgaggaggacgtgagccaggagaagtcccacaaagatcgcgatcgggag
aagagagggtcagggaggcccgcggagccgatccctcgaggcccgccgcccccgcattcg
gacgatgacgatgtagaaccggtggaggatgactaccacgacgaagaggactcgcaggag
gccaagccacagcccaaacccatcatgcgaccaatcactacagctccctcagtgtcgtct
gccagtgggaacgcgactccaaacacgccaggcaacgaatctccctgcggcatcatcatc
ccaggcgagaacactcctgaggtccaacctccagaggagcaccgacccaagattggtctc
agtctcaaactgggtgccaccaacagtcccagccagcttaacgttggaaagagaaagaag
ctggcgaccgtggaaagtgtttttaacaagtttgacgacgaggaggctgacgagcaacct
cgcaaaaggaaactggttccactggactatggtgatgacgacaagagcctcgggctggac
ggggcagagatttcaggagccaaaggaagcatcaacaccgaggagaaacgcaagcacata
aagagcctgatcgagaagatccccacagcccggcccgagctcttctcctaccctctggac
tggaccatggtcgactcgactctgatggatcgccgcatcagaccatggatcaacaagaag
attattgagtacatcggcgaggaggaacccacgctggtcgactttgtctgttcaaaggtg
atggcacacagcactcctcagggtattcttgatgatgttgctatggttctcgatgaagaa
gcagaggtcttcatagtcaaaatgtggaggctgttgatatatgaaacagaagcaaagaag
atcggcctggtgaagtaa
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