Larimichthys crocea (large yellow croaker): 104935440
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Entry
104935440 CDS
T04659
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104935440
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104935440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104935440
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104935440
Intermediate filaments
Intermediate filament-binding proteins
104935440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PMC2NT
SOS1_NGEF_PH
SCAR_helical
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
104935440
NCBI-ProteinID:
XP_019115583
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MMTTVAAEYDHMELQQQYSSNDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEVEHYHDIKRVAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQADRVKAVSTNANKYSVND
DGYKPCDPQVIQDRVSHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSVEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVEAGHFAATKIQER
IADLQAQWAALEQLAVARKKRLEDALALHQFQADADDVDAWALDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRPVIDSLHEQAASLPEEDAESEEVHGRLAGIEERYKEVSELT
KLRKQALQDALALYKMFSEANACEVWIDEKELWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AQRLAEEHPDQAKAITGRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHDGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINAERIQERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGALLVSEKPETEAVVKEKLSALHAMWQDLESTTQTKAQCLFD
ANKAELFTQSCADLDKWMGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQKEVVE
LQSQVQALGQEVKDTDEVDGRRQLVETKFQELLEPLRRRRNFLVASREVHQFNRDVEDEI
LWVQERFPVATSTDHGQNLQTVQLLIKKNQTLQKEIAGHQPRIDDIMERSESLLKDASSS
GDVIRQRLADLQELWRQLTEEAELRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSAVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINTGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIVDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRSLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASEEIKDKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPPVIQQEEAEQQSRVVAQNGLSSDQDSPRDAVDAVDLVNGVAERSSKEPSPGGSP
TIGRKSKSSQSSTLPSKNQDSMSSSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQE
MGFYKDSKTAAQGVPYHNEVPISLKEATCDVASDYKKKKHVFKLRLTDGNEYLFQAKDEE
EMSTWIQAILNANTDRTDVQSSNPGTPASGRAQTLPAAVMLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggttgccgccgagtacgaccacatggagctgcagcagcagtacagcagc
aatgacacggtcaacaaccgctgggacgacgaatgggacaacgagaacagctcggcccgc
ctctttgaacgctcccgcatcaaggcgctcgcagatgagcgggaggcggtgcagaagaag
accttcactaagtgggtcaactctcacctgtccagagtgtcgtgcaggatcaccgacctg
tacatggacctgagagacggacgcatgctcatcaaactgctggaggtcctgtcaggagag
agactgccgaagcccaccaaaggtcggatgcggatccactgtctggagaacgtggacaag
gctctgcagttcctgaaggagcagagggtccacctggagaacatgggctctcatgacatc
gtggacgggaaccacaggctgacgctgggcctcatctggaccatcatcctccgcttccag
attcaggacatcagcgtggagactgaagacaacaaagagaagagatcagccaaagacgct
ctgctgctgtggtgtcagatgaagacggcagggtatcccaacgtaaacatccacaacttc
accacgagctggagagacgggatggccttcaacgctctcatccacaaacacaggcccgac
ctgatcgactttgacaagctgaagaagtccaacgctcactacaacctgcagaacgctttc
aacctggcagaacaacacctgggcctcaccaagctgctggacccagaggatatcagcgtg
gaccatcccgacgagaagtccgtcatcacctacgtggtcacctactaccactacttctcc
aagatgaaggctctgaaggtcgaaggcaaacgcattggaaaggtgttggataacgccata
gagacggagaagatgatcgagaagtacgagtccctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactctctggtcggagttcag
cagcagcttcaggccttcaacacctacaggacggtggagaagcccccaaagttcacggag
aaggggaacctggaggttctcctcttcaccatccagagtaaaatgagagccaacaaccag
aaggtctacatgccgagagagggcaagctcatctccgacatcaacaaggcttgggagcga
ctggagaaggcggaacacgagagggagttggctctgaggacggagctgattcgtcaagag
aaactggaacaacttgccagacgctttgaccgcaaggcagccatgagagagacgtggctg
agtgagaaccagaggctggtttcacaggacaactttggattcgaccttcaggccgtcgag
gcggccaccaagaagcacgaggcgattgagacggacatcgcggcgtacgaggagcgtgtc
caggctgtggttgctgtggccaaggagctggaggtggagcactaccacgacatcaaacgc
gttgcggccaggaaggacaacgtgatccggctgtgggagtacctgctagagctgctgaag
gcccgcagacagagactagagatgaacctgggcctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctgctgtctcaggattatgggaaa
catctgctcggtgtggaggacttgctacagaaacacaccctggtcgaggctgacattgcc
atccaggctgacagggtcaaggcagtttccaccaacgccaacaaatactccgtcaatgat
gatggctacaagccctgcgacccgcaagtcattcaggaccgggtttcccacctggagttc
tgctaccaggagctgacacagcttgctgctgagcgccgcgcccgtctggaggagtcccgc
cgcctctggaagttcttttgggagatggcggaggaggagggctggatccgtgagaaggag
caaatactgtcctctgtcgagcatggcaaagacctgacaggggcgctacgcctcctcagc
cagcaacgtgccctagaggatgagatgagtggtcgtgctggccacctccaacacaccatt
gcagagggccaggccatggtggaagctggacacttcgccgccaccaagattcaggagcgt
atcgctgacctgcaggctcagtgggcggcactggagcagctggctgtggcgaggaagaag
cggctggaggatgctctggcactgcaccagttccaagctgatgcagatgatgttgacgcc
tgggccctggacgccctgcgcattgtctccagcggagagacgggccatgacgagttctcc
acgcaggctctggtcaggaagcacaaggatgccgcggccgaggtggccagctaccgtcca
gtcatcgactcacttcacgagcaggccgcctcactgcctgaggaggatgctgagtcagag
gaggtgcacggtcggttggccggcattgaggaacgctacaaggaagtgtcagaactgacg
aagctgaggaagcaggcgctgcaggatgctctggcgctctacaagatgttcagcgaggcg
aacgcttgtgaggtttggatcgacgagaaggagctgtggctgaacagcatggaaatccct
gaaaaactggaggacctggaggtcatacagcacaggtttgagagtctggagcctgagatg
aacaaccaggcgtctcgtgttgctgtggtgaaccagattgcccggcagctgatgcacaat
ggtcaccctagcgaaaaggacatcaagacccagcaggacaaactcaacaacaggtggagc
cagttccgtgatctggtggaccagaaaaaggagtccttaaactcagccctgggagtgcag
aattaccaccttgactgcaacgagaccaagtcctggatcaaagaaaagaccaaagtcatc
gaatccacccaggagctgggcaatgacctcaccggggtcatggccctgcagcgcaaactt
acgggtatggagcgtgacctggccgccatcgaggacaaactgggtgatctgcgaggcgag
gctcagcggctggcagaggagcaccccgaccaggccaaggccattacaggccgtctggct
gagatcaccgccgtctgggaggaaatgaagaacactctgaagaaccgcgaggagtctctg
ggagaggccaggaagctgcagcagttcctgcgtgagttggacgacttccagtcctggttg
tcccgcactcagacagctatcgcctccgaggacatgcccaacacgctcgctgaagccgag
aagctcatggcccagcacgatgggatcaagaacgaaatccagaattatgaggaagactac
cagaagatgcgggacatgggcgagatggtgacgcagggccagacggacgcccagtacatg
ttcctgcgacagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcccagtcccacgcttaccagctgttcctcagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacgtcctcgctcacactgagatgccc
accacgctggagggcgccgaggccgccatcaagaagcaggaggacttcatgaccacgatg
gacgccaacgaggacaagatcaacggcgtggtggaggccggcaggcgcttggccagcgat
ggaaacatcaacgccgaacgcatccaggagagagtcgcctccatcgatgacaggcacaag
aagaacagggaggctgcagtggagctgctgatgaggctgaaggacaacagagacctgcag
aagttccttcaggactgtcaggagctgtctctgtggatcaacgagaagatgctcacggct
caggacatgacctacgacgaggccaggaacctgcacagcaagtggctcaagcaccaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatccagaaggacggtgcg
ctgctggtgtcggagaagccagagacggaggcggtggtgaaggagaagctgtcggcgctc
cacgccatgtggcaggacttggagtccacgacgcagacgaaggctcagtgtctgttcgac
gccaacaaggccgagctgttcacgcagagctgcgccgacctcgacaagtggatgggaggc
ctcgagggtcaaatccagtccgacgactacggcaaagacctgacgtccgtcaacatcctg
ctcaagaaacagcagatgctggagaagcaggtggaggtgcgtcagaaggaggtggtggag
ctgcagagccaggtgcaggctctgggtcaggaggtgaaggacactgatgaggtggacggg
cggagacagctggtggagacgaagttccaggagctgctggagccgctgagacgccgcagg
aacttcctggtggcatcgagagaagttcaccagttcaaccgagatgtcgaggacgagatc
ctctgggttcaggagaggtttcctgtcgccacgtccacggatcatggtcagaacttgcag
acggttcagctgctcatcaagaagaaccagacccttcagaaggagatcgcaggtcatcag
cctcgtattgatgacatcatggagcgcagtgagagtctgctgaaggacgcctcgtccagt
ggtgatgtcatccgtcagcgcctggccgacctgcaggaactgtggcggcagctgacggag
gaggcggagctccgtcacggacgcctggaggaggcgcacaaagcccagcagtactacttc
gatgcggccgaggccgaggcgtggatgagcgagcaggagctgtacatgatgtcagaggag
aaggccaaggacgagctgagcgccgtcaccatgcagaagaagcatcagatcgtggagcag
gcggtggaggactacgccgagaccgtccaccagctgtccaagaccagcagaggactggtg
gctgacggacaccccgaaagtgagcgtatcagcatgcgtcagtctcaggtggataagctc
tacgctggcctgaaggacctatcagaggagaggaggggcaagctggacgagaggctccgc
ctcttccagctgaaccgtgaggtcgatgacctcgagcagtggatcgctgagcgggaggtg
gtggccgggtcgcacgagctgggacaggactacgaacacgtcaccatgctgcaggagcgt
ttccgggagttcgcccgggacaccgggaacatcggccaggagcgcgtggacgctgtcaac
cgcctggcagacgagctgatcaacactggccatggtgacgcagcgacggtggcagagtgg
aaagacgggctgaacgaggcctgggccgacctgctggagctcatcgacacccggacacag
atcctcgccgcctccttcgaacttcacaagttctaccacgacgccaaggagatcctggga
cggattgtggataagcagaagaagctgccagaggaggtgggacgcgaccagaacacggtg
gagacgctgcagaggatgcacaccaccttcgaacacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggacgcggtgcgccttcagtcggcgtacgccggagacaaagcc
gacgacatccagcggagggagagcgaggtgctggaagcctggaggagtctgctggaggcc
tgcgacggacgcagggtccgcctcctcgacaccggggacaagttcaggttcttcagcatg
gtccgagacctgatgctgtggatggaggatgtgatccggctcatcgaagcccaggagaac
cccagagacgtgtcgtcagtggagctgctcatgaacaaccatcagggcatcaaggccgag
atcgacgcccgaaacgacagcttcacggcctgcatcgagctgggcaaagccctgctggcc
cgaaaacactacgcttcagaggagattaaggacaagctgctgcagctgaccgacaagagg
aaagagatgattgacaagtgggaggaccggtgggagtggctacgactcatcctggaggtg
caccagttctcgcgggatgcgggcgtggccgaggcgtggttgctgggtcaggagccgtac
ctgtccagcagggagatgggtcagagcgtggacgaggtggagaagctcatcaaacgccac
gaggccttcgagaagtcggccgccacgtgggaggagcgcttctccgctctggagcggctg
actacgctggagctgctggaggtgaggaggcagcaggaggaagaggagaggatgaggaag
ccgccgtctcccgagccgcccgtcattcagcaggaagaggccgaacagcagagcagggtc
gtcgctcagaatggactgtcatcggatcaggactctcctcgggatgccgtggatgctgtc
gacctggtgaacggcgtggccgagcggagctccaaggagccgagtcccggaggttccccg
accatcggcaggaagagcaaaagcagccagtcatccacgctaccgtccaaaaaccaagac
tcgatgtcctcgtcgcaactcgagggactcctgcaccgcaaacacgagtgggaggggcac
aacaagaaggcgtccaacagatcgtggcacaacgtgtattgtgtcatcaacaaccaggaa
atgggtttctacaaagacagcaagacggcggctcagggagtcccgtaccacaacgaagta
cccatcagcctaaaggaggcgacctgtgatgtggcgtcagactacaagaagaagaagcac
gtcttcaaactccgactcactgatggaaacgagtatctgttccaagccaaagacgaagag
gagatgagcacctggatccaggccatcctgaatgccaacactgaccgcaccgacgtgcag
agtagtaaccccggaacaccggcgtctgggcgcgctcagacgctgccggctgccgtcatg
ctcactaccgagtcgagtcccggcaagagagagaaggacaaagagaaggacaaggagaaa
cgcttcagtctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
