Larimichthys crocea (large yellow croaker): 104935453
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Entry
104935453 CDS
T04659
Name
(RefSeq) lissencephaly-1 homolog isoform X2
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00565
Ether lipid metabolism
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
104935453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104935453
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104935453
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104935453
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104935453
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
LisH
Beta-prop_IFT140_1st
LisH_PAC1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
DUF2570
ARMC9_LisH
SutA-RBD
LisH_2
Motif
Other DBs
NCBI-GeneID:
104935453
NCBI-ProteinID:
XP_010749592
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Position
VII:15018675..15061342
Genome browser
AA seq
399 aa
AA seq
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MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKCDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAYPTIQDATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGILFHPGGKFIVTCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHRPLPTWSLGV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagaggcaacgagatgaactaaatcgagcgatagccgattatctacgt
tccaatggatatgaagaggcatattccactttcaagaaggaggcggaattagataataat
gaagaattggataagaagtacgccggccttttggaaaaaaaatggacttcagtcatcaga
ttacaaaagaaggtgatggaacttgaatccaaactgaatgaagctaaagaggagatcact
ctgggtgggcccgtaagtcagaagtgtgaccccaaagagtggattccacgcccaccagaa
aggtacgcactgagtggccaccgcagtccagtcacccgcgtcatctttcacccggtcttc
agtgtcatggtgtcggcttctgaggatgcaacaataaaggtgtgggactatgaaacagga
gactttgaacgcacactgaagggccacacagactcggtccaggatatctcttttgaccag
accggcaaactgctagcatcctgctctgcagacatgactatcaagctgtgggatttccaa
ggctttgagtgcatcaggaccatgcatggacatgaccacaatgtttcgtctgtagccatc
atgcccaatggagatcacatcgtttctgcctcgagggacaaaaccataaaaatgtgggag
gtggcgactggctactgtgtgaagaccttcacaggccacagggagtgggtccgcatggtg
cgacccaaccaggacggcacactgatcgccagctgctccaacgaccaaacggtgcgcgtg
tgggttgtggcctccaaagagtgcaaggctgagctgcgagagcacgaacatgtggtggag
tgcatctcctgggcaccagagagcgcctacccgaccatccaagacgccacaggctcagag
tccaagaagagtgggaagcctggccccttcctgctgtctggctccagagacaaaaccatc
aagatgtgggatgttagcattggcatgtgccttatgacactggttggccatgacaactgg
gtgcgtggtatcctcttccaccccggaggcaagtttattgtgacctgtgcggatgataag
accttaaggatctgggactacaagaacaagcgctgcatgaaaaccctgtgtgcccacgaa
cactttgttacctctctggatttccacaggccgctccctacgtggtcactgggagtgtag
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