Larimichthys crocea (large yellow croaker): 104935477
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Entry
104935477 CDS
T04659
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03083
Polycomb repressive complex
lco04980
Cobalamin transport and metabolism
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104935477
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
104935477
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104935477
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104935477
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104935477
03029 Mitochondrial biogenesis [BR:
lco03029
]
104935477
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104935477
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
104935477
HMT complexes
COMPASS/SET1 complex
104935477
MLL-HCF complex
104935477
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
104935477
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104935477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
FlgT_N
Motif
Other DBs
NCBI-GeneID:
104935477
NCBI-ProteinID:
XP_027131414
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MATELATPAVLQPRWKRVLGWTGPVPRPRHGHRAVSIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGEVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLK
AKVPKNGPPPCPRLGHSFSLIGSSCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPMTTGQPPPPRESHTAVVTSGRGANRLIIYGGMSGCRLGDLWVLHIDSLTWTKPA
LSGTAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMCW
ETVLMDSLEENVPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCA
PSRVQLVRANTSSLEVSWGPSQTADTYLLQLQKYDIPATPAAASPAPKPAPIPTPGASSP
KSPIAMTPANQTVPLSGITLVPFPTSVPGSPLAAAAKTPAVLKVAAAPGAAGGASIITVR
QATAKAPGAMATLPAGVRMVVPAQAGQGTPIGSSPQMSGMAALAAAAAATQKIPQSATVL
NVPAGPTVVKTVAVSPGSSSVPVKVAAPVTMVSNPATRILKTAAAQVGGASVVSTPGTPS
RPIITVHKSGTVTVSQQAQVVTTVVGGVTKTITLVNSPLSVGGGGALIGNLGNLGKVVSV
VQSKPGQSGSITAGQAGSSPVAQILQKGALPTGTILKLVTSADGKQTTLLSTAQAGSTST
KPTILGVAPTISKPGTTIIKTIPMSALQGGAGANSPITILTTKMVTPGSAGKIITTVPKI
GSQVVLKGAPGMPGTILRTVPMSGVRLVSPGAVGTKPAVTTLVVKATTGVSSLGTGSVST
TVAEGAVTATNASLTTPITTLATIATLASHVTTATAAIAGPKQVTLIMTPSGAEAQPLVQ
DLPVSIMASPTSEEPGSTTSTTTTTAAGGEAGDTAVTMVCSNPPCETHDTGTTNTATVAS
ANMSRALQVNPPPAQQSAPVSLNEGITNPLCETHETGTTSTATTAGAGGLQQVCSNPPCE
THETGTTNTATTAQPGGDSRQGDSSDPASSTTANQSRAVTMVTQATPTPGPSIPEISSLV
GESRAEPEAEAVAMVTTAAADGAMQTESQSGHVMSSAVLQVHAEGSQMPSSDGGLPQELM
SSEGDRGEAVSGGTTLMVMGLTSDHLAVTTETEEAVRQATIQAVLRAAGQIDGSVDQSVP
IVLTQQDLAALVQQQQQLQDVQIQPEPAEPGPQHSVPTEGLAPADSLNDPAAESNGHELT
SSAVTSAVARLASTFGPAPPLTASLAKIQTPAVLTEVTNGIAATTGKQGAQVRSSVKDSQ
WFDVGIVKVTNMVVTHYYVPYDDNMADDDSGAVPDYSQMRKVELQPGTAYKFRVAGINIC
GRGAFSEVSAFKTCLPGFPGAPCAIKISKNLDGAQLTWEPPAVTSGKITEYSVYLAIQSS
QASSSGSGSAPAQLAFMRVYCGPIPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNQKGYG
PATQVRWLQESSKDPNRQ
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgaactcgcgacccccgcggtgctacagccccgctggaagcgtgtcctgggc
tggaccgggccggtgccgcggccccgacacgggcaccgggccgtgagcatcaaggagcta
atggtggtgtttggcggcgggaacgaggggatcgtggacgagctgcacgtctacaacaca
gcgaccaaccagtggtttatcccggcggtccgtggcgaggtcccccctggctgcgccgcg
tacggctttgtgtgtgacgggacgaggctgctggtgtttggagggatggtggagtacggc
aaatacagcagcgacctgtacgagctgcaggcaagtcgctgggagtggaagcgtctaaaa
gccaaagtgccaaagaatggcccgcctccctgcccccgccttggacacagcttctctctg
attggcagttcctgctacctttttggagggctggccaatgacagtgaagatcccaagaac
aacatccccaggtacctgaacgacctttactgtctggagctgcgacccggctccagcgtg
gtcggctgggagatccccatgacgacgggtcagccgccaccaccgagagagagtcacacg
gccgtggtgacgagtggccgaggggccaacagactgatcatctacggagggatgagtggc
tgcaggctgggagacctgtgggtcttacacatagactctctgacgtggactaaaccagct
ctgagtggaaccgcccccttaccccgcagcctgcactctgccaccaccatcaacaacaag
atgtatgtgtttgggggttgggttcctctggtgatggatgacgtcaaagtggcgactcac
gagaaggagtggaagtgtaccaacacactggcctgcctcaacctggacacgatgtgctgg
gagacggtcttgatggacagtctggaggagaacgtcccgagagctcgagccggtcattgc
agtgtggccatcaactccaggctgtacatctggagcggcagggacggctacaggaaggca
tggaacaaccaggtgtgctgcaaggacctgtggtacctggagacagagcgtccctgcgct
ccctcacgggttcagttggtccgggccaacacgtcatctctggaggtaagctggggaccg
tcacagaccgccgacacctacctgctgcagttacagaagtacgacattcctgccacacct
gcagccgcctcacctgcccctaaacctgcccccatccctacacctggagccagctcccct
aagagccctatcgctatgacaccagctaaccaaactgttccactgtccggcatcacgctt
gtccccttccccacctccgtacctggaagcccgctggctgctgcagccaaaacaccagct
gtcctgaaggtggcagcagctccaggtgcagcaggtggagcctccatcattacagtgaga
caggccacggccaaagccccgggtgccatggcgacacttcctgcaggtgttcgtatggtt
gtacctgctcaggctggtcaggggacgccaataggaagcagtccacagatgagcggcatg
gcagcactggcggcggcggcagcagcgactcagaaaatccctcagtcagcaacagtgctg
aatgtccctgcaggaccaacagtcgtgaagacggtcgctgtgagtccaggatccagcagt
gtgccggtcaaagtggctgctccagttacaatggtgagtaacccggccactcgcatcctg
aagactgctgctgctcaggtgggcggggcatctgtagtctccacccctgggacacccagc
cgaccaatcataacagtccataagtccggcacggtgacggtctcccagcaggctcaggtg
gtcaccacggtggtgggcggagtcacaaagaccatcactctggttaacagtccactcagt
gtgggaggaggcggagctctgatcggtaaccttggtaacctggggaaggtggtgtcagtg
gtccagtccaaaccaggtcagagtggatccatcactgctggtcaggctgggagcagccca
gttgcccagatccttcagaagggcgccctccccacaggaaccatcttaaagttggtgacc
tcagcagatggtaagcagacaaccctcctcagcacggcacaggccggatccacatcgacc
aaacccaccatactgggcgtcgccccgacaatttctaaacccggaaccaccatcatcaag
accatcccgatgtcggcgctgcagggtggagcaggtgccaacagtccaatcacaatcctg
accaccaagatggtcacaccaggaagtgctggtaaaatcatcaccactgtccccaaaatc
ggtagccaggtggtgttgaaaggagctccggggatgccgggtacgatcctcaggacggtc
cccatgagcggagtcaggctggtgtcacctggagcggttggcaccaaacccgccgtcact
acgctggtcgtcaaagcgaccacaggtgtgtccagtctggggacaggaagtgtctccacc
acagtagcagaaggagctgtcactgccaccaatgcctccctgacaacacccatcaccacc
ctagcaaccatcgccacgttagccagccatgttaccacggcaaccgccgccatagcagga
cccaaacaggtgaccctcatcatgactccgagtggtgccgaggctcaacctctggtccag
gacctgcccgtctccatcatggcgtctccaacctcagaagaacctggaagtactacaagt
actacgactactacagctgcagggggagaggctggagacactgcagtgaccatggtctgc
tccaacccgccctgtgagacacacgacaccggaaccaccaacaccgccaccgtggcctcc
gccaacatgagccgggcactgcaggtgaacccgcctccagctcagcagtctgcacctgtc
agtctgaacgaagggatcaccaacccactgtgtgagacccacgagactggaaccaccagc
acggccaccacagctggagccggaggactccaacaggtgtgttcaaaccctccgtgtgag
acccacgaaaccggaaccaccaacaccgccaccacagctcagccgggtggagacagtcga
cagggagactcctctgaccccgcctcctccaccactgccaatcagagtagagctgttacc
atggttacacaggccacacccacccccggtccctccatacctgagatctcctcattggtc
ggagagagtagggcggagccagaggccgaggctgttgccatggtgacaacggcagcagca
gatggggcaatgcagacagagagccaatcaggacatgtgatgtcatcagccgtgttacag
gttcatgcggagggatcacagatgccgtcctcagatggcggtcttcctcaggagctgatg
tcctcagaaggggacagaggcgaggcggtttctgggggaacgaccctgatggtgatgggg
ctgacctcggatcacctggctgttaccacggaaacggaggaagcggtccggcaggcgacg
atccaggcggtgctacgggcggccggacagattgacggctcggtggatcagtccgtcccg
atcgttctgacccagcaggaccttgcagctctggttcagcagcagcagcaactgcaggac
gtccagatccaaccagagccagcagaaccaggaccacagcacagcgttcccacagagggc
cttgctccagcagacagcctgaacgacccggcggcagagagtaacggacacgagctgaca
tcatcagcagtcaccagcgccgtggcccgattggccagcacgtttggccccgcccctcct
ctgacagccagcctggcaaagattcaaacacccgctgtgctcaccgaggtgaccaatggc
atcgcagcaaccacagggaagcagggcgcccaggtgaggtcatcagtgaaggacagtcag
tggttcgatgtcggcatcgtcaaggtgaccaacatggtcgtcacacattactacgtcccc
tacgacgacaacatggctgacgacgactcaggtgcagtgccggactacagtcagatgagg
aaggtggagcttcagccggggacggcctataagttccgtgtggcggggatcaacatctgc
ggccgcggtgccttctcggaggtgtcggcgtttaaaacatgtcttcctggttttccggga
gcgccgtgcgccatcaagatcagcaagaacctggacggcgcccagctgacctgggagcct
cctgccgtcacatcggggaagatcaccgagtactcggtgtatctggccatccagtctagc
caggcctcctcctccgggtcaggttctgctccggcccagctggccttcatgagggtgtac
tgtggtcccatcccgtcctgtctggtccagtcgtccagcctcagcaacgcccacatcgac
tacaccaccaagcctgccatcatcttccgtatcgctgctcgtaaccagaaaggctatggg
cctgccacacaggtccggtggctgcaagaaagcagtaaagatccaaaccggcagtga
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integrated database retrieval system
