Larimichthys crocea (large yellow croaker): 104935588
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Entry
104935588 CDS
T04659
Symbol
itgav
Name
(RefSeq) integrin alpha-V
KO
K06487
integrin alpha V
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04145
Phagosome
lco04148
Efferocytosis
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04514
Cell adhesion molecules
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104935588 (itgav)
04514 Cell adhesion molecules
104935588 (itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104935588 (itgav)
04148 Efferocytosis
104935588 (itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104935588 (itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104935588 (itgav)
04810 Regulation of actin cytoskeleton
104935588 (itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104935588 (itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104935588 (itgav)
04515 Cell adhesion molecules [BR:
lco04515
]
104935588 (itgav)
04090 CD molecules [BR:
lco04090
]
104935588 (itgav)
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104935588 (itgav)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104935588 (itgav)
Exosomal proteins of epithelial cells
104935588 (itgav)
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
104935588 (itgav)
CD molecules [BR:
lco04090
]
Proteins
104935588 (itgav)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
104935588
NCBI-ProteinID:
XP_027146710
LinkDB
All DBs
Position
XVIII:21979617..22004558
Genome browser
AA seq
1038 aa
AA seq
DB search
MSGGQTLVLVLLLAHRGGSFNLDVENPSVYSGPEGSYFGFSVDFFKTPDHQKSDVLIGAP
RANTSSGSVVERGAVYSCPWKNSAACQTLDFDSSGDRTNTEGSQMEFKSKQWFGASVRSD
GEHILACAPLYQWSTFGVSEREPVGTCYLKKADTVVEYSPCRSSANSPEGQGFCQAGFSV
DFLKKNNRVVVGGPGSFYWQGQLISDDVSEIFTRFENKYITQYANTLATKSAGAMYDDSY
LGYSVTVGDFNDDGKEDYVTGVPRGEKALGYVNIFNGLNMESVVNFTGTQMAAYFGHSVA
ATDVNNDGLVDLLVGAPLFMDRVSNGKLREMGQVSVYLGRGGFSFHPPQMLTGSDVYARY
GSAIAALGDLDMDGYNDVAISAPYGGADHSGLVYIHNGRPQGPDPSPSQVLQGRWASSYM
PPSFGYSMTGNTDIDQNGYPDLIVGVFGADKAVLYRARPVIGVNATLDITPQIINPEEKT
CKHPKTGTYVSCFKVKYCLKASGRGAPSTLNFRVDLLLDRLKQKEATKRVLFLHGQTFSY
SKNMVVSNGRGPACEEQHVYLRDEFRDKITPISVAMEYRLDYQLAADRTGLLPIIDVSVP
SNVTKQAHILLDCGDDNICKPDLKLSVESDRQQIYIGDDNALTLKISAENQGEGAYEAEL
HIYLPQQADFTGVGRGEALSRLSCAYKTENQTKMVVCDLGNPMKGGTKVLAELQFSVHQL
SEEDTSVKFDLQIVSSNQFNNTSPRVSSVTKLAVLARVSIRGTSSPGQVLLPIANWKPKV
PPQVGDDIGPQIVHIYELLNSGPSTFSKASLEVKWPYQFKNGSLLYITSYETEGPINCTT
DTEINPLNISNPLSSAKNNTIPPRERETEGRNRNHVRQRRDLESRDAQSDLQTLDCVTAD
CLLLRCQVGRLERRKNAILFIYSRLAVDNFLRTENQNRSYVVRSTATFNVIEMPYKNLVS
ELPSNSTTASVSVVWVAESSPSVPGWVVALAVLAGLLLLALLIFIMYKLGFFKRVRPPQD
DCTEKEQLQPEENGNADA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggacagacgctcgtgctcgtcctgctgctcgctcaccgcggcggctcgttc
aacctggacgtggagaacccgtccgtgtactccggaccggaggggagctacttcggcttc
tcggtggacttcttcaaaaccccagaccaccagaagtcggacgttctgattggagctcct
cgggctaacacgtcctccggcagcgttgtggagagaggcgccgtgtacagctgcccctgg
aagaactctgccgcctgccagacgctcgacttcgacagctcaggcgaccggaccaataca
gaaggctctcagatggagttcaaatccaaacagtggttcggtgcctcagtccggtctgat
ggagaacacatcctggcctgcgctccgctctatcagtggtccaccttcggcgtctctgag
cgcgagccggtgggaacgtgttacctgaagaaagcggacaccgtggtcgagtactctccc
tgcagatcaagtgcaaactcacctgaggggcagggcttctgtcaggccggcttcagcgtc
gacttcctgaagaagaacaacagggtggtggtcggaggcccgggcagcttctactggcag
ggtcagctgatctctgatgacgtctctgagattttcacccgttttgagaataaatacatc
acccagtacgccaacacgctcgccaccaagtcagcgggcgccatgtatgacgacagttac
cttggttactctgtgacagtcggagattttaacgatgatggaaaagaagattacgtgacc
ggcgtacctcgcggggagaaggcgctgggttacgtgaacatcttcaacggcctgaacatg
gagtctgtggtgaacttcacgggaacacagatggctgcttactttggacattctgtagct
gccactgacgtcaacaatgacggcctggtggatctgctggtgggagctcctctcttcatg
gacagagtgtctaatgggaaactgagggagatgggacaggtgtccgtgtacctgggtcgt
ggtggattctcctttcacccgcctcagatgctaacagggtcggacgtttacgcccggtac
ggctctgccatcgcagcgctgggagacctggacatggacggatacaacgacgtagccata
tcagctccttatggaggcgccgaccacagtggtttggtgtacatccataatgggcgtcct
cagggtcctgacccgtctccgtctcaggtccttcagggccgctgggcgtccagctacatg
ccgcccagcttcggatactccatgaccggaaacacagacatagaccagaacggatatcca
gatttaatagtgggagtgtttggagcagacaaagctgttttatacagagctcgtccagtc
atcggtgtgaacgccacgttagacatcacgcctcagatcatcaaccctgaggagaagacc
tgcaagcatcccaagaccggcacatacgtgtcctgtttcaaggtgaagtactgtctgaag
gcgagcggccgaggagctccgtccactctcaatttccgtgtggacctcctgttggaccgg
ctgaagcagaaggaggcgacgaagcgggtcctcttcctgcacggacagaccttcagctac
tccaagaacatggtggtgtccaacgggcggggcccggcctgcgaggagcagcacgtctac
ctgagggacgagttccgggacaagatcacgcctatctccgtggcgatggagtacaggctg
gactaccagctggctgcagaccggaccggactgctgcccatcatcgacgtgtcggtgccg
tccaacgtcaccaagcaggctcacatcctattggactgtggagacgacaacatctgtaaa
cccgacctgaagttatcagtggagagcgaccgtcagcagatctacatcggcgacgacaac
gctctgactctgaagatcagcgctgagaaccagggagagggagcctacgaggccgagctg
cacatctacctgccacagcaggccgacttcaccggggtcggccgcggggaggctctcagc
agactgtcctgcgcctacaagacggagaaccagaccaagatggtggtgtgcgacctggga
aaccccatgaagggaggaaccaaggtgctggcagagttgcagttcagtgttcaccagctg
tcggaggaggacacctctgtgaagtttgacctgcagatcgtcagctcgaaccagttcaac
aacacgagtcctcgagtgtccagcgtcaccaagctggctgtgctcgccagagtgtccatt
agaggcacgtcgtctcccggtcaggtgctgcttcccatcgccaactggaaacctaaagtt
cctcctcaggtcggagacgacatcggaccacagatagttcatatctacgagctcctgaac
agcgggcccagcaccttcagcaaggcgtctctggaggtgaagtggccgtaccagttcaag
aacggctcgctgctctacatcaccagctacgagacggagggaccgatcaactgcaccaca
gacaccgagatcaacccgctcaacatctctaacccgctgtcctcggcaaagaacaacacc
atcccacccagagagcgtgagaccgagggacggaaccgaaaccacgtccgccagagaaga
gacctggagtcaagagacgcacagagtgacctgcagacactggactgcgtcacagcagac
tgtctgctgctcaggtgtcaggtgggtcgactggagaggaggaagaacgccatcctcttc
atctactccagactggctgtggacaacttcctcaggactgagaatcagaatcgttcgtac
gtggttcgatctacagccaccttcaatgtcatcgagatgccgtataagaacctggtgtca
gagctgccgtccaatagtacaactgcgagtgtgtcggtggtgtgggtggcggagtctagt
ccttcggtgccgggttgggtcgtggctctggctgtgctggcaggactgctgctgctggcg
ctgctcatcttcatcatgtacaagctgggtttctttaagcgagtgcgccccccgcaggac
gactgcaccgagaaggagcagctgcagccggaggagaacggcaacgcggacgcctga
DBGET
integrated database retrieval system
