Larimichthys crocea (large yellow croaker): 104935594
Help
Entry
104935594 CDS
T04659
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104935594 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104935594 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104935594 (sptbn4)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104935594 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
104935594 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
CAMSAP_CH
Helical_needle
NOCA1_C
PH_4
Motif
Other DBs
NCBI-GeneID:
104935594
NCBI-ProteinID:
XP_027136555
LinkDB
All DBs
Position
VII:26696270..26758266
Genome browser
AA seq
2724 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPIGSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLSRVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
NIINRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELASEMESEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDIQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAVKRRSELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KSEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAIDKHRLHVVALRKHMVALPLQYREQEEVQVRMGEVEQLYTEVIEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEHL
ATAHPGRAMEVLVPFDGISLEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSERIRERIDTLANRGNQNRE
LAQQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSQVVRKKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLVYVDQGQDLTTVNKQLKKLQTMETQMEEWYHEVGQLQVQ
VSTIPQQTQIKETVAGRQAAVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
ERLPMAMSQEHGSTLQAVQQLMKKNQTLQRELQGHQSRIEDVLERAGIIASIRSPEAICV
RAGHDQLAQLWSLLWTETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLTQIEDKHRRLPEVRARQGSTANTTTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQYWKELLTSCEECRLQITTETDKLRFFGMVR
DQIMWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSRSTVECIEMGKTLLAAR
NPASEEIKDKLEKVITKQHELSEKWDKHWEVLQQLLEVHQFAQEAVVAEAWLTAQEPFIN
SKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDATPNPSILPRLPISPVTRQTIYEQNEASSPPSPSPATPTPSPSSVARRLGSTV
ANYTPVMNGSSYRHTLEARHSPVVGVAAGLGQPSPSSIASIATAAMLISANQARESASAT
KEQAVKAMSHLQPVQAARTLEAKASPYLRQPKIKHLDDAVTPLLVASRLEKARERERLRE
RELMMGEIGTERAEVAVMAEVVLQEPGRERLHSEPTRGPRGSRTDPLGHAEPQGQTHHRD
HRIERQLSSEQLIQARRDELPQEVWREHAERRERRTLERQTSSEQEGHGGHGGHEGRRRE
RDRHRMERQESSEHDTGKEHSDRRSAGGEKRSTLAEIVEQLQEREAAQARGEVPRLPNGI
PEKSSRPDRPRARDRPKPRRRPRPKEAGEATTRRSRSAPAQSSPVVPQPPTHTAHHEGFL
FRKLDIESLKKSTNSQNTEITEPNNRRSWVNLYCVLNKGEMGFYKDAKNTTTPYNNEPLL
NLSHCHCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEDDLKAWVTNITASISEHEEIAKW
GQPQPTTSSTDEGTRRDGSKGDNRSDRGGERSDRAERIERADKEKEKEREREKEKERERG
ERSERSDRGGKSDAKRSEKSGKKK
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccgatcggctcggggttctgggagacggagtgtaccagctccaagctgtttgag
tgctcccgcatcaaggccctggcagatgaacgagatgcagtgcagaagaagacttttaca
aagtgggttaactcccatctttccagagtgtcctgtcgcatatctgacctctacaacgac
ctgagggatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgccg
aggcccacacgtggtcgcatgcggatccactgcctggagaacgtcgacaaagccctgcag
ttccttaaagagcagagggttcacctggaaaatgtcggttcccatgacattgtggatgga
aatcaccgcctcaccctgggccttatctggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacagaggacaaccgagaaactcgctctgccaaggatgccctgctgctc
tggtgccagatgaagaccgcagggtactctgaggtcaacatccagaatttcaccacctgc
tggagagacggcctcgccttcaatgcactcatacacagacacagacctgacttgatagag
ttccacaagctgacacggtccaatgcaacccacaacctccagcaagcctttaacatcgct
gagcagcacctgggtctcaccaaactcctggaccctgaagatgtgaacacagagaacccc
gatgaaaagtccatcatcacttatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtactagacaactgtatcgaggcagag
aacatcatcaaccgctacgaagccctggcctcagacctgttggactggatagagaagacc
atcgcggtcatcagtaatcagaagtttgccaattcgctgaccggagttcaacagcagctg
caggccttcacaacttactgcacaatagagaagcccatcaagtttcaggagaaggggaat
ctcgaggtcctcctcttcaccatccaaagcaaactcagagccaacaaccagaaaccctat
gtgcctcacgatgggaagctcatctcagacatcaacaaggcctgggagaggctggagaag
gcggagcatgagagaggcgtggctctgcgcaaggagctgattcgtcaggagaagctggag
ctgctggctcagtgctttgaccacaaaaccactatgagacaagcctggctcaatgagaac
cagaggcttgtatcacaggacaattttggctatgacctaccagcagtcgaggcagcaatg
aagaaacacgaggctatcgaggcggacatagcttcgtatgaagagcgaatcggggtggtg
gtggagcttgcctcagagatggagtcagaaggatactacgacatccggcgtatcttggca
cgaaaggagaacatcctgggccagtggagtctgctgaaggagctggtggctgggaggagg
acccgcctggagaagaacctggccctgcagaagacatttcaggacatggtgtacatgatc
gactggatggaggacatacaggtccagctgctgtcgaaggactttgggaagcatcttctg
gaggtggacgacctgctgcagaaacacagcctgcaggaagccgacattacagtgcaggct
gagagagtggagacactcaacaccgctgcactcaaattcaccactatagaaggttaccaa
ccatgtgaccctcaggtgatctgtaaccgtgtcaaccacgtctcgtcctgtctggaggag
ctgaaacaactggcagttaaaagacgctctgagctggaggagtcgagacaactttgggct
ttcttccaggagctggaggagtcggaagcctggatcagggagaagagctccatcttgggc
gctcagggttatgggaaggatctgagcagtgtgctgaagttactacagaaacacaaaact
ctggctggagaactgctggctcaccggtcgctgctgcagaacaccatgaaacgaggaaag
cagatcctcagtgagaagagctttggcacggcggggatccaggagcgcatcatggaggtg
aagagcgagtggaagaggctggaggaccaggctgcgcagcgtcttggccacctgcaggag
gcgctcaacttttttcagttctccacggagacggacgacctggtggcctggctgcaggat
gcttaccggctggtctccagtgaagactttggacatgatgagtattccacccagtctctg
ctgaagaaacacagaggggtcagcgaggctatcgacaaacatcgtctgcatgtagtggca
ctgcgcaaacacatggtggcgctgcctctgcagtaccgtgaacaggaggaggtgcaggtg
cgtatgggagaggtggagcagctgtacacagaggtgattgaggtagcggtgctcagacag
cagtggcttcatgacgccctcgccgtctaccgcatgttcagtgaggtcaatgcctgcgag
ctgtggattgatgagaaggagcagtggctggacaagatggagatccctgagaggctggag
gacgtggaggtggtggcacacaggtttgagagtctggaccaggagatgaacagcctgatg
ggaaggatcctggacgttaaccaaatagttcagcagctcctggatggaggtcatccatct
tctacagaggtcagaggttgtcaggatcacctcaactccaggtggaacagcatcgtggag
ctggtcgagcagaagaaagatcagctggactcgatgttacgcctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagagaaaagccatcgacgccactcag
tacatgggaagtgacctgggaggagtcctggctctgcagagacgcctgtccaccatggag
ggagccctgtctgtcctggagcccaaactactccatctacaggaagaggcagagcatctg
gccacagcccacccgggtcgggccatggaggttctcgtgccgtttgatggcatcagcttg
gagtgggaggagctgaaacgcaccctgcagggctgtgaggactcgctgatggtggccagc
aggctgcagagcttcatacaggatttggactcgttcctcacctggttggtccagactcag
acagctgccgcctcagaccagctgcccaatgacctggaggaggcggagaaactcatcaac
aaacacgctgctctaaaggaggagattggacggtacgaagaggactacgaacgcctgcag
gccatgaacgagctgctggagtccgaggaggctcctctccctcaggctgccctacagcag
tggctgcagaagctcgacgtcggctggaacaaactgctggaaatgtgggagagcaggaga
gaggttctggtccaggctcacattttccatctgttcctgcgagatgtcaaacaggctgag
tccttcctcaacaaccaggagtcggccctcgctcacgtggagctgcccaccacggtggaa
acagtcgaagccgccataaagaaacacaaagacttcactaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggctggagagagtctgatcagccagagcaacatctac
tctgaacgcatcagggaacgtattgacaccctcgccaacaggggaaaccagaaccgagag
ctcgcccagcagtggctggaaaaattgaatgaccagtgggaacttcagaggtttcttcag
gactgccatgagctgggggactgggtgtgtgagaagatgctgatggcgagggacagcagc
cgagacgagacccagaagcttcataagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaataaggaatggctggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagccaagtggtccggaagaagttagaggagatcagggagtgctgg
caggatctggagagcaccacccaggccaaagcccgccagctctttgaggccaacaaggca
gacctcctggtgcagagctacgaaagtctggaccagagactgggccagctagagggtcaa
ctggtctatgtggaccagggacaggacctcaccactgtcaacaagcagctgaaaaaacta
cagaccatggagacccagatggaggagtggtatcatgaggtggggcagctccaggtgcag
gtgtccacaatcccgcagcagacgcagatcaaggagacggttgccgggcgtcaggctgcc
gtagaggccaggatggtgcgtctgattgagccgctgaaggagagacgacgcatcctgctg
gcgtccaaagaagtgcaccaagttggacgagacctggaggatgagatcttgtggatccag
gagcgcctcccgatggccatgtctcaggagcacggctccactctgcaggcggtccagcag
ctcatgaagaaaaaccagacacttcagagagagctgcagggccaccagagcagaatcgag
gacgtcctggagagggcggggatcatcgcatccatccgaagccccgaggcaatctgtgtc
agggcgggccatgaccagttggcccagctgtggagtctgctctggaccgagaccgagagg
aggcagctggttctggacgccatgtaccaggcccagcagtactacttcgacacagccgag
gtggaggcctggctgagcgaacaagaactgcacatgatgaacgaggagaaggggaaggat
gagccaagcacactgcagctgctgaagaaacacttggtcctggaacaaaccatcgaggac
tacgcagagaccatcggcctgctgtcacagcagtgtcgacagctgctggagatggggcat
ccagactgcgagcagatcagcaagcgccagtcgcagatcgatcgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgactggagcagcagtactggctctaccagctc
aacagggaggtcgacgagctggagcagtggattgctcagagggaggtggtcgccagctcg
cccgaactgggtcaagactttgagcatgtcactgtcctgcaggagaagtttacagagttt
gcgtcagagacaggcagcgtgggacaggagcgagtgacggccgtcaaccaaatggtggac
gagctcatcgactacggccactcagaggccgccaccatcgctgaatggaaggatggagtg
aacgaggcctgggccgacctgctggagctcatggagactcgggcgcagatgctcgccgcc
tcacatcagcttcataagttcttctctgactgcagagaggttttgacccagattgaggac
aaacatcgaaggctgccagaagttcgggctcgacagggcagcactgccaacaccaccacg
ctacagagactcctgcacagcttcgaacaggacatacagctgctggtcacacaagtgcgt
cagctgcaggagagtgctgctcagctgaggacggtgtatgccggcgagaaggcagaagcc
atcgcgtgccgcgagcatgaggtgatgcagtactggaaagagctgctgacgtcctgcgag
gagtgtcgactacagattaccactgagacagacaagctgaggttcttcggcatggtccga
gatcagatcatgtggatggactctatcatctgtcagatagggacaggagagaagcccagg
gacgtgtcctcagttgaggtgctgatgaattatcaccagagtctgaagagcgaagtggag
gctcgcagccggagcactgtggagtgtatcgagatgggcaaaacactgctggctgctaga
aacccagcgtctgaagagatcaaggataaactggaaaaagtgattactaagcaacatgag
ctgtctgagaagtgggacaagcactgggaagtcctacaacaattgttggaggttcatcag
tttgcacaggaggcggtcgtggcggaggcgtggctgaccgctcaggagccgttcatcaac
agcaaggagctgggcgggagtgtggacgaggtggaacagctgattcgtcgacacgaagcc
ttccgcaaagccgctgcaacctgggaagagagattcagctcattgcgacgactcaccacg
gtagaaaagttgaaagcagagcaaagtaaactacccccgacccctctgctgggtcgtaaa
gtcttcctggacccccaagatgccacacccaatccatccatccttccccgcctcccaatc
tcccccgtcacaagacagaccatctacgaacagaatgaagccagctctcctccatcacct
tcacctgccacgcctacaccctccccttcgtctgtggctcgtcgtctgggatcgactgtc
gctaactacacccctgtgatgaacggctccagctaccgccacaccctggaggctcggcac
agtcctgtagtgggtgtggctgcaggactaggccagccctcgccgtcctcgattgcctca
attgccacggcagccatgctcatctcagccaaccaagcgcgagagagcgccagcgcaacg
aaagagcaagcggtaaaggcaatgagtcacctccagcctgtacaggcggcgaggacactg
gaggcgaaggcctccccgtatctacgacaaccaaaaatcaaacacttggatgatgcggtg
acgccgctgctcgtggccagcaggttggagaaggcgagggagagggagaggctgagggag
agagagttgatgatgggtgagatcgggacagagagagcagaggtggctgtgatggccgag
gtggtgctccaggagccgggccgggagcgcctgcacagcgagcccaccagagggccacga
ggatctaggaccgaccctttaggccacgctgaaccacagggccagacccaccacagggac
cacaggatagaaaggcagctgtccagcgagcagctgatccaggcacgcagggatgagctg
cctcaggaggtgtggagggaacatgccgagaggagggagagacgaacgctggagaggcaa
acgtccagcgagcaggagggccatgggggccacgggggccacgagggccgacgaagagag
agggaccgacatcggatggagagacaggaatccagtgagcacgacaccggaaaggagcac
tctgacagacgctcagcaggaggagaaaaaagatccactctggcagaaattgtagagcag
ctgcaagaaagagaagcggcacaggctcgtggtgaggttccccgtctgcctaacgggata
ccagagaagtcttcccgtcccgacaggcctcgagctcgggacagacccaaaccgcggcgc
cgaccgcgacccaaagaggcaggagaggcgacgacgcggcggtccaggtccgctccagct
cagagcagccctgtggtgccccagccgccaacacacaccgcacaccacgagggcttcctt
ttccgcaagctggacatcgagagcctgaagaagagcaccaacagtcagaacacagaaatc
acagagcccaacaatcgcaggtcatgggtcaacctgtactgcgtgctgaacaaaggggag
atgggtttctacaaggacgccaagaacaccaccacgccctacaacaatgagcctctgctc
aacctgtcccactgccactgcgacgtcaccaacggctacaagaagaagaagaacgtcttc
acgctcaaaacgaaggacggcagcgagtttttgtttcatgcaaaagatgaggatgacctc
aaagcgtgggtgaccaacatcaccgccagtatttcggagcacgaggagattgccaaatgg
ggtcagccccaaccaactacctcatccaccgacgagggcacacgccgcgacggcagcaag
ggggacaacaggtcagatcgaggtggcgagcgctcggaccgggccgagcggatcgaaagg
gcggataaagagaaggagaaggagagggagagagagaaggagaaggagagggagagagga
gaacggtcggagaggtcagatcgaggtgggaagtcggatgcaaagcgctctgaaaagtct
ggtaagaaaaagtga
DBGET
integrated database retrieval system
