Larimichthys crocea (large yellow croaker): 104935622
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Entry
104935622 CDS
T04659
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104935622
Glycosaminoglycan binding proteins [BR:
lco00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104935622
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Motif
Other DBs
NCBI-GeneID:
104935622
NCBI-ProteinID:
XP_027147635
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Position
XIX:13223682..13238944
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AA seq
2331 aa
AA seq
DB search
LLYRRHAALTRRKRNILFPSGVKLCTQETFDQAIANHLSYFHLRVCQETVWEAFKIFWDR
LPDRDEYQDWVNRCIDGSISVMDIGSFFSQSEEHISLIRSRVAMATATNSVPVTADPPPC
SSETTTVPTRESVTRPGGGVIIRSETITMNLDDLPPGLDVTTWTPPISVSEGSVLKASTT
WTEIPLDLTSESAVAATTENNKDVQETGASITSEGPSLVITDVEVPSESGEADVETIAED
TVEVSTEVSVIHSPFNGVVAKVGEDRIVPDTTDEAVAEDDKILKIIPEDVDVPHSEVIQE
VSPEGEEPPSEVMVKEVTTKKTNTITPAVEAVTLEVLGQEISPEPAEAPSETMTLRIPET
TVEITEGPEVEDITDNSLDITSDVALTDEFVEEPEPVTEIVSDAPQLAFPGVSEGEPAEH
PSEAVVAVSHDKTDVSTNATPTVVLITDSEEEAEAFINVTPEQESVPVIKTEVPSEASIL
TTTDKTEVSEDTGEGKAPEDEPTVMAMVTSEPFVVNLQDDMDEDASYVTEEAPPYTTVGE
MEATVDSTTVEEVIVSEATERPKEELQEEINHEEASVFTEDKTTAAEESTEAVTTKTDVK
EPTETDETAEEELPEETEEATVTGEDTIEAPVHVTTDTAVEEEAFESTIETELTGEELVK
VADEATGEPTEDGEEIAQAPTEPVEKETADVTETVQEPEPIEETIQEPEPIEETVEIVDL
TGGAAQETGHRGRPEQKGELKKEIKEESTKPPGVPAQGEPEEETAEETEPTGVPEQEVEP
VETEEPKQDAEQQNTEESVEPIGEPAQEVQPVEQPAEETEPTGVPEQEVQPVEAEEPKQN
TEQQNAEESAEPTGGSVHEAEPEVVTYDDKTDPTITQEEEREEAISEASEEIIEEEVGVA
ESTEVEEKIVPENLDSDEEVTPVITVVPEDTETLSPGTEVVKTPETEVTLELPGDSEVEV
PSETTKKSTTQVVEPTVQVIDSGSFSEPKKEVPVPEAPSETSPEVVTNAHSGTTTMGGTT
EAEEVTKEFSPEEDVISREDSVQVVPGEVEGVSSDVRTEDEIMTEAPVEIMSESETAVDV
TAESTQGTVVDEPTPGASLEVTTKFVMEYNNGNFPDLTERPYDVDDNLLGNNGFGLDNEE
DNSIGNEIDDTLLWPPRSMKDQVVELSIKLREETYNDDLRDPSSFHYQQLSRHFTRRIED
AFVRLPGFKNVHVVEFRPQKDLERGLVVLVHYGITLEVDSSGITSNTLDFISLQNNLVEK
NYPGAGEQPTVVYTITDFRNYITEALHKDNFMTNSSLETQLEDVENLLPAMKPTSRPADT
FDNMDNVLAAEKPPDAPSHEVESGNVFLKKDDFLFDPFDPWKGPQADVVSENDVFMFGGS
TDPPTVTEFPKKTVDLEPAENNGNIEDEGFLLNNASATGDETPRGDHVVALFPTEKLQSG
SEVTLDEGSGSGFSGDSQEVDLWSWQPVATSDGTGFYDESGGRLEVLPPPDLEETEDEDE
DEEAVDKDDLIGVDVEFTNVHTLQTTTVPAFEESVPDRGKEEPFLDQVLVTPHISTDPRY
STTTEAPVFLPKATLTVELSVQTVEASGIYGDYSLTGPHTHAEPVTDSPETEAWTRKASV
FAAPTNLAIKFQETTEKVEVTTEAGIENPVVTVGSKSEEVPWEEELEVIVASEVPKVTNT
DPSSTKETLTIVEVQTVTVKDSSVAPTTEDPTEPDLFTETSKLLLPGTEDHVEVEILEEQ
HIGTTDSTTATAPVGGIQDEDLVIDEVMVVTTTAGLVLTSSDHSSNIALSPEKDSPFTRV
SDSVPVDEELVYHEHPNHEDVEEVPMINPTLNVPLLVVVNKTESALGAVGLQGASLQDED
MAAILTQTSESELGQVQTTTSSLQEVNNTNPTTELQPFEYNLSDLPNIDVSFDVFRYGGV
ATEGDSSGFSSGAQGSDLDSIALPTRPGKALTVFFSLRVTNMAFSMDLFNKSSAEYKALE
QRFLQLLVPYLQSNLNNFKNLEILNFRNGSIVVNSRMRFGKPVPRGVTNVVYLILEDFAN
TAHQTMNLSIDKYSLDVESGDRADPCKFQACNEFSRCMVNRWSGEAECVCDAGYLSVDGL
PCQSICEVQTNFCLNDGQCDIIPGKGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIAS
VAGFLMVVAGIIFFLARSLREQYDEEDTEDPLRRGDSVPTLERATKLNSMFEGDLVTAQY
CRHYDNVMPQYYRRCDPDSPQYNSSVSTDGPKDLINDEIRHIYQNTTLSKEEIQERLRII
ELCSRDQHFADFVRQTQVFLEGDRGAEEAIIAPHNEVLNRRTSESEKEGEN
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
cttctgtacagacgacatgccgctctaactcgaaggaaaaggaatatcttgtttcccagc
ggagtcaaactttgcacccaggagacgtttgaccaggccatcgccaaccacctcagctac
tttcacctcagagtgtgtcaggagacggtgtgggaagcctttaagatcttctgggaccgg
ctgccagatcgggatgagtaccaggactgggtcaatcgctgcattgacggctcgatcagc
gtcatggacatcggcagctttttcagccaatcagaagaacacatcagtctgatcaggagt
agagttgccatggctactgcgacaaacagtgtgccggtcacagcagacccgcctccgtgc
agctctgaaacaacgaccgtcccaaccagagaatcggtgacccgaccaggaggaggagtc
atcatcagatcagagacaatcacaatgaacctagacgaccttcctccaggtcttgacgtt
acgacttggacccctccaatttctgtatccgaaggttcggttctcaaggcttcaacaacc
tggactgagattcctctggatttgacctctgaatctgcggttgctgccacgacagagaac
aataaagacgttcaggagaccggggccagcatcacttcagaaggtccatctttagtcatc
actgacgtagaggttccttctgagtctggagaagcagatgttgagaccattgcagaggat
actgtggaggtttccacagaggtttctgttatccacagcccctttaatggggttgttgca
aaagttggggaggatagaattgtcccagatacaacagatgaggctgtagcagaagatgac
aaaatccttaagatcattcctgaagatgtggatgtacctcattctgaagtaattcaagaa
gttagcccagaaggtgaagagccaccgtcagaggttatggttaaagaagtcactacaaaa
aaaacaaacactataacacctgctgtagaggctgtcacactggaggtattagggcaggaa
atatctccagagcctgctgaggctccatcagaaaccatgacgttgcgtatcccagagaca
actgtcgagatcactgagggcccagaagttgaagacattacagacaattctttggatatc
acctcagatgtagccttgactgatgagtttgtagaggaaccagagccagtcactgaaata
gtatcagatgcacctcagttagcttttcctggagtatctgaaggtgaacctgcagaacat
ccttcagaggctgttgtagcagttagccatgataaaaccgacgtgagcacaaatgcaact
ccgactgtagttctgataacagattcagaagaagaagctgaagcatttataaatgtgact
ccagagcaagaatctgttccagtcataaaaactgaggttccttcagaggcttctattctg
accacaacagacaagacagaagttagtgaggacaccggcgagggcaaagcgccagaagac
gaaccaacagtgatggccatggttacttctgagccttttgtagttaacttacaagatgac
atggatgaagatgcttcttatgtcacagaggaggcaccaccatatactacagttggtgag
atggaggcaacagttgacagtactactgtggaggaagtaatagtatcagaggcaaccgaa
aggccaaaagaggagctacaagaagaaatcaaccatgaagaagcttcagttttcactgaa
gataagacgactgctgctgaagagtccaccgaggcagtaaccacaaagacggatgtgaaa
gagccgactgagactgatgaaacagcagaggaagaactacctgaggaaacggaggaggca
acggttaccggagaggataccatagaagctccagtacatgtcacaacagacacagcagta
gaagaagaagcatttgaatctacgatagaaacagaactaactggcgaagagctagtaaag
gtggccgacgaggctacaggagaaccaactgaagatggagaagaaatagctcaggcacct
acagaacctgtcgagaaagaaaccgcagatgtgactgaaactgtacaagaaccagaacct
atagaagaaactatacaagaaccagaacctatagaagaaactgtagaaatagtagatctg
acaggaggtgctgcacaagagactggacacagaggtcgaccagagcagaaaggagaactc
aaaaaagaaattaaagaggagtcaacaaaacccccaggggtaccagcacaaggagaacct
gaagaagaaactgctgaagagacagaaccaacaggtgtaccagagcaggaagttgaacct
gtagaaacagaagaaccaaaacaagacgcagaacaacaaaatacagaggagtcagtagaa
cctataggagaaccagcacaggaagtccaacctgtagaacaacccgctgaagagacagaa
cctacaggggtaccagaacaggaagttcaacctgtagaagcagaagaaccaaaacaaaat
acagaacagcaaaatgcagaggagtcagcagaacccacaggaggatctgtacacgaagca
gaacctgaagtggtaacctatgacgataaaactgatcccaccataacacaagaagaagaa
agagaagaagccatttctgaagcctcagaggagataatagaggaagaagttggtgttgcc
gaatcaacagaagttgaagagaaaattgttccagaaaatcttgactctgatgaagaggtc
actccagttatcactgttgttccagaagatacagagaccttatcgcctgggactgaagtg
gtgaaaacacctgaaacagaggtaacactggagctcccaggagactctgaggtagaagta
ccatcagaaaccaccaagaagagtactacacaggtggttgagcctacagttcaagttata
gactctggatccttttctgaacctaagaaagaagtcccagtcccagaggctccaagtgaa
acatctccagaagttgtgactaatgcccattcaggtactactacaatgggaggaaccact
gaagctgaggaggtcaccaaagagttttcaccagaagaagatgtcatctcaagggaggac
agtgttcaggttgtcccaggggaagttgagggggtttcctctgatgttagaacagaagat
gaaatcatgacagaggctccagtagaaatcatgtctgagtctgaaaccgctgtggacgtc
accgcagagagtacacaaggtactgtagtagatgagcccactcccggtgcctctttggaa
gtcacgaccaagttcgtcatggagtacaacaacggcaacttccccgatctaacagagagg
ccttatgatgtagatgacaacttacttggaaacaacggctttgggttggacaacgaggag
gacaactcgataggtaatgagatagacgacaccttgctgtggcccccgaggtccatgaag
gaccaggtggtggagctgagcatcaagctgagagaagaaacctacaacgacgatctgaga
gacccgagcagtttccactaccagcagctgtccagacacttcacacgcaggattgaagat
gcctttgtcaggttgccgggcttcaagaacgtccacgtcgtggagttcaggcctcagaag
gacctggagcggggtttggtggtcctggtacactacggcatcactctggaggtcgacagc
agcggcatcaccagcaacacgctggacttcatctctctgcagaacaacctggtggagaag
aattaccccggagccggcgagcagcccaccgtcgtctataccatcaccgacttcagaaac
tacatcaccgaggctctgcacaaagacaacttcatgaccaatagcagcctggaaacgcag
ctggaggacgtggagaacttgttacctgccatgaaacctacgagccgaccagccgacacc
ttcgacaacatggataacgtcctcgctgcagagaagcctcccgacgctccgagccacgag
gtggaaagtggcaacgtcttcctgaagaaagatgacttcctgttcgaccccttcgacccg
tggaaaggccctcaggctgatgtggtgagcgagaatgacgtcttcatgttcggtgggagc
acagatcctccgaccgtcactgaattcccaaagaagacggtcgacctggagccagcagag
aataatggaaatattgaagatgagggattcctcctcaataatgcctctgccaccggagat
gaaaccccccgaggggaccatgtggtcgccctctttccaacagagaaacttcagtcaggc
tctgaagtcacactggacgaaggctctggctctggtttctctggagacagccaggaagtt
gatctctggtcctggcagccagtggcaacctctgatgggactggcttctatgatgagagt
ggcggcaggctggaggtgctaccgccgcctgatctggaggagactgaggacgaagatgag
gatgaggaggccgttgacaaagatgatctaataggggtggatgttgaatttaccaatgtt
cacactttacagacaactacagttcctgcttttgaggaatcagtgcctgacagaggcaaa
gaggaacctttcttggatcaggttttagtaacgcctcacattagcacagaccctcggtac
tcaactaccactgaagcacccgtattcttgcccaaagcgaccttgactgttgaactctca
gtgcaaacagtggaggcatctggcatctatggtgactactccttgactggaccacatacc
catgcagagccagtcacagattctcctgaaactgaagcttggactcgcaaggcctctgtt
tttgcagcaccgactaatttggcaatcaagtttcaagaaaccactgagaaggtagaagtc
actactgaagcaggaatagagaatcctgtggttacagttgggtctaaatcagaagaggtt
ccttgggaggaggagcttgaagtcattgttgcatctgaagtacctaaagtcactaatact
gacccttcttcaaccaaagagacccttaccattgtagaagtccagacagtcacagtgaaa
gactctagtgttgctccaaccactgaagacccaacagaaccagatttattcacagaaaca
tccaaactgctgctgccgggaacagaagaccatgttgaagttgagattttagaggagcaa
cacattggcaccactgattcaacgacagcaacagctccggtgggtggcatccaagatgag
gatctggttattgatgaagtcatggttgtcaccacaactgctggtctggttctcacttca
tctgaccacagcagcaacattgcactctcacctgagaaagactcgccgttcactcgggtg
tcggactcagtgccggtggatgaggaactcgtttaccacgaacacccaaaccatgaagac
gtcgaagaagttccaatgatcaatccaacattaaatgttcctcttttggttgtagtgaac
aaaacagaaagtgctctgggtgccgttggtttgcaaggtgcttcacttcaggatgaagac
atggctgccattttgacacaaacttcagaaagtgaattaggtcaggtccaaacaacaact
tcctcacttcaggaagtcaacaacaccaaccccaccactgagctccaacccttcgagtac
aatctttccgacctgccaaacattgacgtcagcttcgatgtgttccggtatggaggtgtg
gcaactgaaggtgacagcagtggcttctctagtggggctcaggggtcagacctggacagt
atcgcattgccaacccgacctggcaaggccttgacagtgttcttcagcctcagggtgacc
aacatggcgttctccatggacctcttcaacaagagctctgctgagtacaaagctctggag
caacggttcctgcagctgctggtcccgtaccttcagtccaacctgaacaacttcaagaac
ctggagatcctcaacttcaggaatggcagcatcgtggtgaacagcaggatgaggttcggt
aaaccagttcccagaggggtcaccaacgttgtttacctcatcctggaggacttcgccaac
accgcccaccagaccatgaacctgtcgattgacaagtactctctggatgtggaatcaggt
gaccgggcagatccctgtaaattccaggcgtgtaatgagttttcccgctgtatggtgaac
cggtggtcgggcgaggccgagtgtgtttgtgacgccggatatctgagcgtggacggtctg
ccgtgtcagagcatctgcgaggtgcagaccaacttctgtctcaatgacggccaatgtgac
atcatccccggcaagggcgccatctgcaggtgtcgagttggagagaactggtggtatcgt
ggcgagcactgcgaggagtatgtttcagagccgctggtggtgggcatcgctatcgcctcg
gtggccggtttcctcatggtggtggccgggatcatctttttcctggcaagatcgctgcga
gagcagtacgacgaggaggacaccgaggatccgctacgacgaggtgacagtgtgccgact
ctggagcgagccactaagttaaactcgatgtttgagggcgacctggtcaccgcacagtac
tgccgtcactacgacaatgtcatgccacagtactaccgccgctgcgacccggactccccc
cagtacaacagctccgtcagcaccgatggccccaaagatctgatcaacgacgagatacga
cacatttaccaaaacaccacgctcagcaaagaggagatccaggaacgtctgaggatcatc
gagctttgttccagagatcaacactttgcagactttgtacgacaaactcaagtattcctg
gagggagacagaggagcggaggaagccatcatcgcaccacataatgaagtcctgaaccgc
cggacctcggagtcagagaaagagggcgaaaactaa
DBGET
integrated database retrieval system
