Larimichthys crocea (large yellow croaker): 104935659
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Entry
104935659 CDS
T04659
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104935659 (chd1)
03036 Chromosome and associated proteins [BR:
lco03036
]
104935659 (chd1)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104935659 (chd1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104935659 (chd1)
SLIK complex
104935659 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
Motif
Other DBs
NCBI-GeneID:
104935659
NCBI-ProteinID:
XP_019127743
UniProt:
A0A6G0I056
LinkDB
All DBs
Position
I:complement(2363177..2387483)
Genome browser
AA seq
1823 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKMEQPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQQQ
QQQQQQQQQQQRQSSSNSGSDEDSSSSDESDSSSGSKRRRNSGSSDSGSGSGSGSGSGSD
SSAAEENSDETASDYEPSHKIKSRKPPTKMNFRNGKKSSSQKKKTQKGSSSDDEDDKYKK
VASAGPRRQATVNISYKEDEELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRIGRKR
ATGSITTVYAVEADGDPNASFNSNKEAGEIQYLIKWKNWAHIHNTWETEETLKLQNVKGM
KKLDNFKKKDQEKKKWLKAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGY
PDYLCKWQGLPYSECSWEDGALIAKKFQKCIDDYMCRNQSKTIPSRDCKVLKQRPRFVPM
KKQPSYIGGDGLELRDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTIGFLNYMFNEH
QLYGPFLLVVPLSTLTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRMKFN
ILLTTYEILLKDKSFLGSVNWALIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQ
NSLKELWSLLHFIMPEKFHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLP
AKVEQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKP
PEDNEFFNRAEALQQLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSR
QFLFQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN
PQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTV
LHTGAAPSSSAPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPG
PSTVGEELLSQFKVANFTMMEDEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEI
YLLPRMRNCAKQISFNASEGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFS
DAEIRRFVKSYKKFGGPLERLDAIARDAELVDKSEHDLKRLAETVHNGCIRTLRENPCGP
EKTSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKA
AHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRA
DYLIKLLSKDLAKREAQKQAGTANSRKRKPRSKKSKTLKPTKTDEVMKSTSSDPSSDKRS
DEDDEIEEEKMVAPVKALSRRGRADRVVVKEEEDDDDDDDDDDDEEPEQEEVSSSGEREV
KGKEIKKENKKEKKEESWDIKEIKELKEKKESKPLEPVHKLEESVEKNEVKTEVRTKKAS
DVPVHITASGENVPISEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHT
RQCLIKIGDHITECLKEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQEN
AQAMEQNTRNINTHGYKHADIERLKDNSHQDESSRDSCSSDRHQPSGRYHESSKERHSSE
SHRKTTGGESRKRPYSSFSNGKDHRDHYRPDSRDRDRERDRDRDRDRQDRYYNDSKHRKL
EEFRSSRDHRPDMKDHSHSDHRSSYRYHSDWQTEQRASASGPRSPRDQRSPYDSRSPMGH
RSPFDYSSDHKSTPEQIWSSRKT
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagcggagaatcgagtaattca
gatgatgaatccggttctggatcaggctctgcatcagggtctggctcagggtccagttct
agttcctccagcagcagcagccaatcagggagcagtgactcaggtagtggctcagactct
ggcagccagtcagattctgacacagagaaatccaaggagaagatggaacagccaaataag
tcaaacattgatggagctgagttctggaagtccaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacaacagcttcagcagcaacaacaacaacaacaacaacaacaa
caacaacaacaacaacagcagcagcagcagcagagacaaagctcctcaaatagtggatct
gatgaggactcgtcaagtagcgatgaatctgactcatcaagtggatccaaaaggagaaga
aattcaggctcctctgactctggatcaggttctggatctggaagtggttctggatcagac
tcatcagcagcagaggagaacagtgacgaaacagcatcagactatgagcccagtcacaaa
atcaaaagcagaaagcctccaaccaagatgaattttcggaatgggaagaaaagcagcagt
cagaaaaagaaaacccagaagggttcttcttctgatgatgaggatgataagtacaaaaag
gtggcgtctgcgggtccacggcgccaggccacagtcaacatcagctacaaggaggatgag
gagctgaagactgactcagacgacctggtggaagttctgggtgaagatgtcccccagcct
gaggaagatgagtttgaaacactggagagagtgatggacagcaggataggaaggaaaaga
gcaacaggaagtataaccactgtatatgctgtagaagcagatggagaccccaatgcaagc
ttcaattccaacaaagaggctggtgagatccagtatttgataaaatggaagaactgggct
catatccacaacacctgggaaacggaggagacgctcaaattacagaatgtcaagggcatg
aagaaactggacaacttcaaaaagaaggatcaggagaaaaagaaatggttaaaggcagct
tcaccggaggatatagagtatttcaattgtcaggaagaattgatggatgatctgcactct
cagtaccagctcgtagaacgaatcataggacattcaaaccagaaatcagcggctggttac
ccagactatctgtgcaagtggcagggtttaccatactctgagtgtagctgggaagatggt
gctctgattgccaaaaagttccagaaatgcatcgatgactacatgtgcagaaaccagtcc
aagaccattccatccagagactgcaaggtgctgaaacagagacccaggtttgtgcctatg
aagaagcagccatcttacataggaggtgatggactggagcttcgagactaccagttggac
agtttgaattggatggctcactcctggtgcaaaggtaacagttgcatccttgctgatgag
atgggtttagggaaaaccatccagaccatcggcttcctcaactacatgtttaatgagcac
cagctgtacggccccttcttgctcgttgttcctctctctacactaacctcctggcagaga
gaaatccagctctgggcacctcaaatgaatgttgtggtctacctgggagacatcagcagc
aggaacatgatcaggactcacgagtggatgcatgtccatagcaagagaatgaaatttaac
atcctcctcaccacgtatgagattcttctcaaagacaagtcatttttgggcagcgttaac
tgggccttgattggtgtggatgaggcgcaccgactgaagaatgatgactcccttctctac
aagaccatgatcgacttcaagtccaatcacaggcttctgatcacaggaacgccactgcag
aactccctgaaagaactctggtccttgctacacttcattatgcctgagaagtttcattct
tgggagctgtttgaggaggagcatggtaaaggaagggactctggctacaccagtctacac
aaagagttggaaccttttctgctccgcagagtcaagaaggatgtggagaaatctcttcct
gccaaagtggagcagattctcagagttgagatgagtgctatccagaaacagtattacaaa
tggatcctgactaggaactacaaggctctaagtaaaggtaccaaaggcagcacgtcgggc
ttcctgaacatcatgatggagttaaagaagtgttgtaaccactgttaccttatcaagcct
ccagaagacaacgagttcttcaacagggctgaagccttacagcaactgatccgaagcagt
gggaagctggttctgttggacaagctgctggtgcggttgaaggagcgaggccacagagtt
ctcatcttctcccagatggtacggatgctggatatcctggctgattacctgaggagccga
cagttcctctttcagagattagacggctccattaaaggagagatgaggaagcaggccttg
gatcattttaatgctgagggctcagaggatttctgcttcttgttatcaacgcgtgcgggt
ggtctgggtatcaatctggcatcagctgatacagtagtcatctttgactcagactggaac
ccccagaatgatctgcaggcccaggccagggcccacaggattggacagaaaagacaggtg
aatatctaccgtctggtgaccaagggctcagtggaggaggacatcattgagagagcaaag
aagaaaatggtgctggaccacctagtcattcaaaggatggacaccacagggaaaacggtc
ctccataccggtgctgctccctccagttctgcaccgttcaacaaggaggagctgtctgcc
atcctgaagtttggtgctgaggagcttttcaaagagccagagggtgaggagcaggagcct
caggaaatggatattgacgagatcctcaaaagggctgaaaccagggaaaatgaccctgga
ccctctacggtgggagaagaattgctgtctcagttcaaggtggccaactttaccatgatg
gaggatgaggaaatagacatcgactctgagcgcagtcagaggagttgggacgacatcatt
cctgaggaacagaggaggaggatggaggaggaagagcgacagaaggagctggaggaaatc
tatttgctgccacgtatgaggaactgtgccaaacagataagctttaatgccagtgagggc
cggcagagcaggaacaggaggtactctgggtccgacagcgactccccctcagaccgaaag
aggccaaagaaacgggggcgacctcgaaccattccacgagaaaacatcaagggcttcagt
gatgctgagatccggaggtttgtcaagagttacaaaaaatttggaggaccacttgaaagg
ttggatgctattgcccgtgatgctgaacttgtggataagtctgaacatgacctgaaacgt
ttggcagagacggttcacaatggctgcatcagaacactacgagaaaacccatgtggacca
gagaagacctcaggaggcagaagagggaaggtgaaagggccgacattcagaatctctgga
gtccaggtgaatgcaaagctcgttatctcccatgaagaagagctggctccactacacaag
gccattccggctgaccctgaggaaaggaaaaagtacatgattccatgccactcaaaggca
gcccactttgacattgagtgggggaaggaggacgactctagtctccttataggaatctat
gagtacggttatggcagctgggagatgataaagatggacccggacctcaatctcacacac
aagctcctaccagacgaccctgacaagaagccacaggccaaacagttacagaccagagca
gactacctcatcaagttgctgagcaaggacctggccaaaagagaagcacagaaacaagca
gggacggccaattcacggaagaggaaaccaagaagtaaaaagagcaaaactctaaagcca
actaagacagacgaggtgatgaagagcacgtcctcagatccctcatcggacaagagatca
gatgaagatgatgaaattgaggaggaaaagatggtggcacctgtgaaggcactgagcaga
cgtggccgagcagacagggtggtggtaaaggaggaggaggacgatgatgatgatgatgac
gacgacgacgatgaagagcctgagcaggaagaggtttcttcatcaggggagagggaggtc
aaaggaaaagagataaaaaaagaaaacaaaaaggagaagaaggaggaaagttgggacatt
aaagagatcaaggagctgaaagagaaaaaagaaagcaaacctctggagccagtgcataaa
ttagaggagagcgtggaaaagaatgaagttaagactgaggtacgaacaaagaaagcctct
gatgtgccggtccacataacagcaagtggagagaatgtgccaatatctgaggagtcagag
gagctggaccagaggaccttcagtgtgtgtaaggagaggatgcggccagtcaaagcagcc
ctgaagcagctggacagaccagagaaagggctgtcggagcgcgagcagctcgaacatacg
agacagtgcctcataaagattggtgaccacatcactgagtgtctgaaggagtattcaaac
cctgacctgatcaaacagtggagaaaaaacctgtggatatttgtttccaaattcactgag
tttgacgccaggaagctacataaactatacaaacatgcaatcaagaaacgacaggagaac
gcccaggcgatggagcagaacactagaaacattaacacccatggctacaaacatgcagac
atcgaaaggttaaaggacaactctcaccaggacgagagcagcagggacagctgcagctcc
gacaggcatcagccttcaggtcgataccacgagagcagtaaggagagacacagctccgag
tcccacaggaagaccacaggaggagagtccaggaaaagaccctactcatcattcagcaac
ggcaaagaccaccgagaccactacagacctgacagcagagacagagacagagagcgagac
agagaccgggacagagacagacaggacagatactacaatgacagtaagcacaggaagctg
gaggagttccgctccagcagagatcaccgcccggacatgaaggatcattcccattcagac
caccgatcttcctatcgctaccactcagactggcagacagagcagcgagcctcagctagc
gggccccgctcaccccgagaccagcgctctccgtacgattcccgctcgcccatgggacac
cgctcacctttcgactactcgtcagaccacaagagcacaccggagcagatctggagcagc
cgcaagacataa
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integrated database retrieval system
