Larimichthys crocea (large yellow croaker): 104935685
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Entry
104935685 CDS
T04659
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00562
Inositol phosphate metabolism
lco01100
Metabolic pathways
lco04020
Calcium signaling pathway
lco04070
Phosphatidylinositol signaling system
lco04081
Hormone signaling
lco04082
Neuroactive ligand signaling
lco04261
Adrenergic signaling in cardiomyocytes
lco04270
Vascular smooth muscle contraction
lco04310
Wnt signaling pathway
lco04371
Apelin signaling pathway
lco04540
Gap junction
lco04621
NOD-like receptor signaling pathway
lco04912
GnRH signaling pathway
lco04916
Melanogenesis
Module
lco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
104935685
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104935685
04371 Apelin signaling pathway
104935685
04020 Calcium signaling pathway
104935685
04070 Phosphatidylinositol signaling system
104935685
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104935685
04081 Hormone signaling
104935685
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
104935685
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104935685
09152 Endocrine system
04912 GnRH signaling pathway
104935685
04916 Melanogenesis
104935685
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104935685
04270 Vascular smooth muscle contraction
104935685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104935685
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
104935685
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
104935685
Endocytosis
Macropinocytosis
Phospholipase C
104935685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
C2
EF-hand_like
PH_12
DUF4277
Motif
Other DBs
NCBI-GeneID:
104935685
NCBI-ProteinID:
XP_027136666
LinkDB
All DBs
Position
VII:19579333..19604600
Genome browser
AA seq
1161 aa
AA seq
DB search
MASAQPGVHALKLQPPAVSHTLRNGSNFIKWDEDLSTVTPVTLHVDAHGFYLYWTDQNKE
TELLDLTLVKDVRTGRSTKTPKEAKLRELLDVGNLVGRLENRMVTVVTASDLVNVNQLNF
IASQEDEAKVWCEELFSLSSNLLSHNLNRDHSLLKAYVKLTLQPNAEGRIPVKNIVRLFS
SDRKRVENALENCRLPYSRGDSIKLEDFTLEVYKSFLDSLCPRPELCNIFKQEGADNGAL
SVDQMTEFINNKQRDPRLNEILYPPLRPAQTNALMERYQHDQAQLKQGVISLQAFSSYLS
SDENGVIPPEKLDQSEDMNFPLSHYFINSSHNTYLTAGQLAGSSSVEMYRQVLLAGCRCV
ELDVWKGRTAEEEPVITHGFTMTSEISFKEVIEAIAECAFKTSPFPVILSFENHVDSLKQ
QAKMAEYCQSIFGEALLIDPLDKYPLESGVPLPSPQELMGKILIKNKKSHKPSNNTDTKR
LTDQPANQSNDPVSPSNNTGELEAESEEDDDDEDDDGKKGSAEREAVATEEMSTLVNYVQ
PTKFNSFEASKKTARCYHMSSFVETKALEHLTKSPVEFVEYNKSQLSRIYPKGTRVDSSN
FMPQLFWNAGCQLVALNYQTIDLSMQLNLFMFEYNGRSGYRLKPEFMRRPDKHFDPFTEN
TVDGIVANTLCVKVISGQFLTERRVGVYVEVEMFGLPADTRRKALKTKTSQNNNAINPVW
DEEPIVFKKVILPTLASLRIAAFEEGGKFIGHRIIPVSAIRPGYRYIGLRNEKNQSLILP
AVFVYIVVKDYVPDTFADVIEALSNPIRYVNLLEQRSKQLAALTLDDVEEETQPEDEVET
SAERKNDLKSAPLENGLSPASGPVGHTPVATTPKASAANQQAATTDAAKPAAKTEDLVLS
VLIDVPMCTIESLQQSKVYQKEQRRQFKELKELVRRHQKKTSELLREFNNKYKKTARQCS
KSRASCSDSEKDERLQQLRDEQQQQLLALRQEQYYSQKYLQREHIKMLTERLSSLAEESH
NAQMKKLKDICDKEKKELKRQMDRRRTEKINQAKTKEKHLAEEEKIEINKSYVNEVVQNI
KRLEETQAKRHDQLVEQHNELLQEIQDQKPKLQGAVEADFQERFQCLPGEIEDFLQDRKA
EVRGQSKSRPSTPHETLSEED
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgctcagccgggggtccatgcactgaaactccagcctcccgccgtctcacac
acactgaggaacggaagcaacttcattaaatgggacgaggatctgtccaccgtgactcca
gtgactctgcatgtggatgctcatggattttacctctactggacggaccaaaacaaggag
acagaactgttggacctgacgctcgtaaaagatgtcagaacgggaagaagcaccaaaaca
cccaaggaggccaagctgcgggagctgctcgacgtggggaacctggttggccggctcgag
aaccgcatggttaccgtggttacggcttcggacctcgtgaacgtcaaccagctcaacttc
atcgcttcgcaggaggacgaggcgaaggtgtggtgtgaggaactgttttctctgtcttcc
aacctgctgagccacaatctcaacagagaccacagtctgttgaaggcgtacgttaagtta
actctccagcccaacgcagaggggagaatccctgtcaagaacatcgttcgactgttttcc
tcggacagaaagagagtggagaatgccctggagaactgcaggctgccctacagtcggggt
gacagcatcaaactggaagacttcacacttgaggtttacaagagctttttggacagtctg
tgtcctcgtcctgagctctgcaacatcttcaaacaggaaggagccgataacggggcgctg
tcagtcgaccagatgacagagttcatcaacaacaagcagagagacccgaggctgaacgaa
atcctctacccgcctcttcgtcctgcgcagacgaacgccctgatggagaggtaccaacac
gaccaggcacagctgaagcaaggcgtcatctctctgcaggcattctccagttatctgtcc
agcgatgagaacggcgtcatcccgccagagaaactggaccagtctgaagacatgaacttc
cccctgtcccactacttcatcaactcgtcacataatacatacctgacagcgggccagctg
gcggggagctcctcagttgagatgtaccggcaggttcttttggccggatgccgctgtgtg
gaattagacgtgtggaaaggacgaaccgcagaggaggaacccgtcatcacgcacggcttc
accatgacatcagagatctcttttaaggaggtgattgaagccatcgcagagtgcgccttc
aagacgtcacctttccccgtcatactctccttcgaaaaccacgtcgactctttgaagcag
caggctaaaatggctgaatattgtcagtctatttttggagaagctctgttgattgaccct
ctggacaaataccctctggagtccggcgtccccctgcccagccctcaggagctgatgggc
aaaatcctcatcaagaacaagaaatcccacaaaccctcaaacaacacagacaccaagaga
ctgacggaccaacctgccaatcagagcaacgatccagtgtctcctagcaacaacacggga
gagctggaggctgagagtgaggaagatgatgatgatgaagatgatgatggtaaaaagggc
tcagcagagcgtgaagccgtggctacagaggagatgtcgactctggtcaactacgtccag
ccgaccaagttcaactccttcgaagcctccaagaagacagctcgctgttaccacatgtcg
tctttcgtggagaccaaagctttggagcacctcacaaagtcaccagtggagtttgtggaa
tataataaatcccagctgagtcgtatctatccgaaaggaacccgagtcgactcgtccaac
ttcatgcctcagctcttctggaacgccggctgtcagctggtggctctcaactaccaaact
atagatttgtccatgcagctgaatctcttcatgttcgagtacaacggtcgaagcggctac
agactgaagccggagttcatgagacggccggacaaacactttgaccccttcacagaaaac
acagtggacggcatcgtggccaacactctctgtgtgaaggtgatttcaggccagtttctg
actgagcggcgggtgggtgtttatgtggaggtggagatgtttggacttcctgcagacacc
agaaggaaagccctgaagaccaaaacctcccagaacaacaacgccatcaacccagtgtgg
gacgaagagccgatcgtcttcaaaaaggtgattcttcccacgctggcctcgctgagaatc
gctgcgtttgaagaaggagggaagttcatcggtcatcggattattccagtctcagccatc
agaccaggttatcgttacattggattgaggaatgagaaaaaccagtctctgattctcccg
gctgtgtttgtctacatcgtggtcaaagattacgtcccagacaccttcgcagatgtgatt
gaggctttgtccaaccccattcgatatgtcaacctcctggagcagaggtccaaacagctg
gcggctctgacgctggacgacgtggaggaggaaacgcagcccgaggacgaggtggagacg
tctgcagagcgaaagaacgacttgaaatcagctccactggagaacggactcagccccgcc
tctggacctgtaggccacacccccgtcgccacaacgcccaaagcctccgcggccaatcag
caagcagctacgacagatgcagccaaaccagcagcaaagactgaagatctggtgttaagt
gttttgatagatgtccccatgtgcaccatcgagagtctgcagcagtcaaaggtttaccag
aaggagcagagacgtcagtttaaagagctgaaggagttagtgaggaggcaccagaagaag
acctccgagctcctccgagagttcaacaacaagtacaagaagacggcccgacagtgcagc
aagagcagagcttcgtgctcggacagcgagaaagacgaacgcctccagcagctgagagac
gagcagcagcagcagcttctggctctgcggcaggaacagtactacagtcagaagtatcta
cagagagagcacattaaaatgctgacagagcgactgagcagtctggctgaggagagtcac
aacgcccagatgaagaaactcaaagacatctgtgacaaagagaaaaaagagctgaagagg
cagatggatcgaaggagaacggagaagatcaaccaagcgaagaccaaagagaaacatctg
gccgaagaggagaagatcgagatcaataagtcctacgtcaatgaagtcgtccagaacata
aagcggcttgaggagactcaggcgaagcgccatgatcagctggtggagcagcacaatgag
ctcctgcaggagatacaagaccagaaaccaaagctgcaaggggccgtggaggccgatttc
caggagcggttccagtgtttgcccggagagatcgaagacttcctgcaggacaggaaggca
gaggtgagaggtcagagcaagtcccgaccatcgacgccacacgagactctgtcggaggaa
gactga
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