Larimichthys crocea (large yellow croaker): 104935835
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Entry
104935835 CDS
T04659
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104935835
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104935835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Geminin
Motif
Other DBs
NCBI-GeneID:
104935835
NCBI-ProteinID:
XP_010750035
UniProt:
A0A0F8CN45
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All DBs
Position
XIII:complement(42287274..42295305)
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AA seq
663 aa
AA seq
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MNAEVTLFPSVHPWSQIPSTACLNLIHSDTSAWILPSLLPAPKSCRTSCECMYSSKPEPS
PDPQNLEAQLDFFHKLGYSTAQVQAVQRKFGPNTDTDKVLGELVRISSSREASQEEVKQG
PVTTMSVLVPRGDVQAAGPMLLLPFTESSPQSREESSKDKDALRPVVIDGSNVAMSHGNK
EVFSCLGIQLAVNFFLDRGHTEITVFVPSWRKEQPRPDVPITDQHILTDLERKKILVFTP
SRRFAGKRVVCNDDRFIVKLAYECDGIIVSNDMYRDLQGEEPKWKRFIEERLLMYSFVNN
KFMPPDDPLGRHGPTLENFLRRFPKTQKKQPCPYGKKCTYGIKCKFNHPERAKQSNRLVA
DELRENAKHPSTAQKQSSARSSPVPGQSLSLVEDMAKKLTLGHDSGSLKKEHKNEHVAQV
KASHRSSKKATSRKEKSNQNVSSDHGSVRCSGSQEQLDSGLGSIDSQPMDSPWSDHQYGA
TYGSSQHGHNVSQQYCPPRNAPCSCCSHKPSTHRTASAFQHHNQHYNLGPTSSHSSDMIP
YSSPHYPSYGAYPVSVPAYSQPTDFQHSRVHSHPQQQYWSDPFRAHPLPVLSLPGECSHW
KPPQGTQQSPSGGEEREVVRKKLLAIFSAQLVDTAMDMFPQLMDPQMLVAEILMLQSQNR
SLR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgaagtcacactcttcccatctgttcacccgtggagtcagatccccagcaca
gcctgtctgaatctcatacactctgacacttctgcatggatcctcccttcacttctccca
gctccaaagtcctgccgtacctcctgtgagtgcatgtattccagtaaaccagaaccatcc
ccggacccccagaacctggaagcccagttggacttcttccacaagctggggtactccacg
gctcaggttcaggctgttcagcgcaagttcggtcccaacacggacacagataaagttcta
ggggagctggttaggatcagctccagtcgggaggccagtcaggaggaggtcaagcagggg
ccggtgaccacaatgtcggtgctggtgcccagaggagacgtccaggctgcgggccccatg
ctgctgctgccttttactgaatcatcccctcagagcagagaggagagcagcaaggacaaa
gacgctctcagacctgttgtcatagatgggagcaatgtggccatgagtcatgggaacaag
gaagttttctcttgtctgggaatccagttggctgtgaacttcttcctggacagaggccac
actgaaatcaccgtgtttgttccctcatggaggaaggagcagcccaggccggatgtccct
atcacagatcagcacattctgacagacctggagaggaagaagattctggtgttcacacca
tcacgtcgttttgcaggaaaacgggtggtctgtaatgacgaccgcttcatcgtcaagctg
gcctacgagtgtgacggcatcattgtgtccaacgacatgtaccgggaccttcagggagag
gagccaaagtggaagcgcttcatcgaggagaggctgctcatgtactccttcgttaataac
aagtttatgcctcctgatgatcctctcggccgccatggaccaaccctggaaaacttcctg
cggagatttccaaagactcagaaaaaacagccatgcccttatggaaagaaatgtacgtat
ggaatcaagtgtaaatttaaccaccccgagcgggccaaacagtccaatcgtttggttgca
gatgagcttcgggagaatgctaagcacccttccacggctcagaaacaatcttcagctcgc
tctagccctgtgcctggacaaagcctctcgttggtggaggatatggctaagaaactgaca
ctgggacatgacagtggctccttaaagaaagaacataaaaacgaacatgtagctcaggtg
aaggcaagtcaccgctctagtaagaaggccacatctcgaaaggagaagagcaaccaaaat
gtgtcttctgaccatggttcagtacggtgtagtggctctcaggagcagctggactctggt
ttaggctccatagacagtcaaccaatggattctccttggagtgatcaccagtatggggcg
acatatggaagttctcagcatggccacaatgtaagtcagcagtactgccctccgagaaat
gcaccgtgcagctgctgctcacataagccttccactcataggaccgcatcagctttccag
caccacaaccagcattataacctcgggcccaccagcagccacagctctgatatgattccc
tacagctctccacattaccccagttatggtgcatatccagtcagtgtgcctgcatacagt
cagccgacagatttccagcacagcagagtccatagtcacccacagcagcagtactggtcc
gatccattcagggctcatcctctgccggtcctcagcctgccaggggagtgctcacactgg
aagcctcctcaggggacacaacagagtccaagcgggggggaggaaagagaggttgtccgg
aagaagctcctcgctatcttcagtgcccagttggtggacacggccatggacatgtttcct
cagctgatggatccacagatgcttgttgctgagatccttatgctgcagagtcaaaacagg
tctctgagatga
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