Larimichthys crocea (large yellow croaker): 104935839
Help
Entry
104935839 CDS
T04659
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104935839 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Other domain-containing proteins
Patched domain-containing proteins
104935839 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
DUF7041
Motif
Other DBs
NCBI-GeneID:
104935839
NCBI-ProteinID:
XP_010750038
LinkDB
All DBs
Position
XI:23805779..23849609
Genome browser
AA seq
925 aa
AA seq
DB search
MCFIGGDGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRQA
VLSNSTFHKVPVSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDAIAERWENEFCALVSRLSTAEAPHASDQLHIQSLTSFSLWRDFHQTGVLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIDYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKGDFITILKGSFLRSPEYQHFTEDIIFTKN
RETEEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcgttctactggctgggcttattcgttagcagg
caccccgttttcttcctcaccgtccccgcggtcctcaccatcattttcggatctaccgtg
ctcagccgattcaagccggagacggacctggaggtgctggtcgcccctactcacagcctc
gccaagatcgagaggagtctcgccaacagcctgtttccaatcgaccagtcgaagcacaag
ctgtactcggatttgcacactccgggtagatatggcaggctgatcctgttggccaagtcc
ggcgggaacatcctggagttggccgatcaggtcctgcaggttcacaagcaggtgttggat
ttgcgcgtcaattacaaggggttcaattacacgttcgcgcacctctgcgtcttgagccac
agggacaagcgctgcctcctggatgatatcatcaccatcttcgaagacatcaggcaggct
gtgctttccaacagcactttccataaggttcccgtgagctacccaaacacaacattaaag
gatggtcgtgtgtcctttatcggccaccagctgggcggtgtgtccttctcgcccaacagc
cgtgatcagcaggtcaaattcgcccgtgccgtccagatcacctactacctccgcaaccac
ggacccgtggtgcaggatgccatcgccgagcgctgggagaacgagttctgtgccctggtc
agccggctgtccacagccgaggcaccacacgcatctgaccagctacacatccagtcactc
acctctttcagcctgtggcgggacttccaccagacgggtgtactggccaagggggaggtg
ttggtcagcttggtgctggtgctcctggccgccaccatctccagctccatgcgggactgc
ctgagggggaagccgttcctgggcctcctgggggtgctgaccatctgcatcgccaatgtg
accgccgcagggatcttctttatatcagacgggaagttcaactctacactgctggggatt
ccgttctttgccatgggccatggaactaaaggggtgttcgagctgctggcaggctggagg
agaacgagggaaaaccttcccttcaaggagcgcgtggcggatgcttttgctgacgtgatg
gtgtgctacaccatgaccagctcactctacatcatcacctttggcatgggagctagccct
tttaccaacattgaatctgtaaagattttctgccagagcatgtgtgttgccattctggtc
aactacttctatgttttctctttctatggctcctgcctggtgtttgccggacagctggag
cagaaccgttaccacagtgttttctgttgtaaaattccctcagtggagtatctggaccgc
cagcccacatggtttaaaaccatgatgagtgatggccatgacttgtccacgcaccacgac
agtgtcccctaccagaatcacttcatccagcacttcctgcgtgagcactacacagaatgg
attaccaacacctatgtcaaaccctttgtggtcatcctgtatctcatctacgcatctttt
tcattcatgggatgtttacaaattagtgatggatcaaatattgtgaatctgctggctagt
aactctcctagtgtttcctatgctctgacccagcaaaaatacttcagtaactacagtcct
gtgattgggttttacatttatgagcccatcgactactggaactcaacggtgcaggagcac
ctgaagactctgagtcatggcttcaacaagatctcctggatggacaactttttccactac
ttgcgggtggtgaatgtaagtgcatcaaccaagggtgacttcatcaccatcctcaagggc
tccttcctgcgcagcccggagtaccagcacttcactgaggacatcatattcaccaagaac
cgtgagactgaagagtatgacattatcgcctcacgaatgtacttggtggcacggacgaca
gagaagaagcgtgaagaggtggtggagcttctagaaaagcttcgtccgttgatgcttatc
aacagcatcaaattcattgccttcaatcctacgtttgtgttcatggaccgctacagctct
tctgtcatctcgcccatcctgacctcaggattcagcgtactcacaatcctcatcctcact
ttcttcttggtcatcaaccccttgggtaacttctggctcattctcactgtaacatccgtg
gagctgggtgtcttgggtttgatgaccctctggaacgttggcatggacagcatctcaatc
ctgtgccttatttataccctcaactttgccatggatcactgtgcaccacacctgtacact
tttgtgctagccaccgagcacactaggacgcagtgcatcaagttggcactggaggagcac
ggggcagccatcctacagaacacatcctgctttgtgatcgggatcatgcccctggtgttt
gtgccttccaatctgacctacacactgttcaagtgctccctcctcaccgcgggctgcacc
gtgctgcactgcttcgtcatcctgcccgtcttcctgaccttcttcccgccatccaaaaaa
agacacaagaaaaagaaacgagccaagcgtaaagagcgggagagggagagggagcgggaa
cgggagagggaaagggaaagggaggagatagagtgcattgaagtcagggagaatcctgat
catgtgacaaacgtctga
DBGET
integrated database retrieval system
