KEGG   Larimichthys crocea (large yellow croaker): 104935893
Entry
104935893         CDS       T04659                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104935893 (atxn2l)
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104935893 (atxn2l)
SSDB
Motif
Pfam: LsmAD PAM2
Other DBs
NCBI-GeneID: 104935893
NCBI-ProteinID: XP_027141073
LinkDB
Position
XII:31543946..31553168
AA seq 987 aa
MHMTKKTRSTMKPPAQTQSSPLSGSLMFEGVYNNARMLHFLTAVVGSTCDVRVKNGAVYE
GIFKTLSSQCELAVDAVHKQSDGDGGGGGGGGGGGGGGQSSPPKIEDITDTMIFSPADLV
TMTCRDVDLSFAVRDTFTDTAISSTRVNGDHREKVLQRWDGNGNGENFELESDASNGWDA
NEMFKFNEEAYGIKSTYDSSLSMYTMPLEKGNSEVFRQREARAARLASEIESSLQYRRRV
SLENEEGRSEEDKYSSVVREREDRASPGFTSTGSVSREGKYIPLPQRAREIGLSGSSMRT
GGSGRTAAPSSSSRHPPPSSSSPKPPSDRSSPLSVRTAYSPHQSQSSPPAAGSPPCTNHV
LPHSLSHPQALADATRSSVNGVTSRTSPKSQRLQSNRNLRTPNSQSSAAVSRAPKPDAPP
QDLPLVGPAFMDSSPSAVTTATTTKPSGPTPLFPVDVNEILSAAAKERTEALSSPQEVKS
SKAPSVQQRSQLEELRKFGKEFRLQPSSSPSVSPASVDPPQHSSASPADSSSSSSSSPAP
PKPLTSSTQDLPPATEAASTSSAQTSTAPVGSQSSGPGTSHSVLGGEEACPESSERVEAA
SAAAVVQVKNSTLNPNAKEFLPIKGNAVMKPAPTPTPPRPTPPSPVVLPPPGQPGGGAGG
GGGAIYSNPPGHYLSYVSPIHIQGHSIQAPQMYQYTMSTVNQGKYPRAKGPVVGQRPEHH
PSPASPMLSAAGSAAGPPLVASPYPQSYLQYGQVIQAMPPHYHGQVPRQRTVDLKAVYSM
LQGGARMLTSGAPPQAMGPPGPQYPGQAEGQPGPQQAMFAQSFSHHSGSIHHPQPSSTPT
GNQPPPQHTAPSPGHTQSSQSGPQPQSMFHSGGLSAPTPPNLPPGHSSPQASYTMQGYSL
PTHQPLPHGFPSISQLTQAHVTGGMSGPHHSAGHGLPPVMLHYVPPQQGSGSNPQQGAPQ
HFYIGPHQAVQVQAHPTQQLSFHPSAN
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgcacatgacgaaaaagacgaggagcaccatgaaaccgcccgcacagacacagtcctct
ccgctcagcggcagcctgatgttcgaaggcgtctacaacaacgccaggatgcttcacttc
ctcacagcggtcgtgggctccacctgcgacgtccgggtcaaaaacggcgccgtgtacgag
ggaatcttcaagactctgagctcgcagtgtgagctggctgtggacgctgttcataaacag
agtgacggagacggaggaggaggaggaggaggaggaggaggcggcggcggcggccagtcc
tctccacccaagattgaagacatcactgataccatgatcttcagccccgcagacctcgtg
accatgacctgccgcgacgtcgacttaagctttgctgtcagagacacgttcaccgacacc
gccatcagctcgacccgggtgaacggcgatcacagagagaaagttcttcagagatgggac
ggaaacggaaacggagaaaactttgaactggagtcggacgcttcaaacggctgggacgcc
aacgagatgttcaagtttaacgaggaggcgtacggcatcaagtccacctacgactccagc
ctctccatgtacaccatgcctctggagaaggggaactcggaggttttccgacagcgggag
gcgcgagcggctcggttagccagcgagatcgagagcagcctgcagtaccgccgccgggtt
tctttagagaacgaagagggccggagcgaggaggacaaatacagctccgtggtccgagag
agggaggaccgggccagccccgggttcacctccacgggcagcgtttccagggaaggtaaa
tacattcccctccctcagcgcgctcgtgagatcggcctgtctggcagcagcatgaggacc
ggaggctccgggcgaactgccgcgccctcgtcctcctccagacacccgccgcccagctcg
tcctcccccaaaccgccgtctgacaggagcagcccactgtccgtcaggaccgcctactct
cctcaccaatcacagagcagcccgccggcagccggcagccctccgtgcaccaatcacgtc
ctgccgcactccctgtctcatccacaggcgctggctgacgccacacgctcgtctgttaac
ggagttacatccagaacttccccgaagtctcagagacttcagagcaacagaaacctgcga
acaccgaactcccagtcctcagctgcagtctctcgtgctccgaaaccagacgcccctcct
caggacctccccctggtcggccctgctttcatggactcctccccctctgctgtcaccacg
gcaaccaccaccaaaccctctggccccaccccactcttccccgtcgacgtgaatgagatc
ctgagcgcggcggctaaagagcggaccgaagctctgtccagcccgcaggaagtgaagagc
agcaaagctccctcggtccagcagaggtctcagctcgaggagctccgcaagtttggcaaa
gagttcaggctgcagcccagctcgtctccttcagtgtctccggcctccgtggatcctcct
cagcacagctccgcctcacccgccgactcctcctcctcctcctcctcctcccctgcaccg
cctaaacctctcacctcctccacccaagacctgccgccggccacagaggcagcttccacc
tcctctgctcagacctccacagctcccgtcggctctcagtcgtcaggtcctgggacgagc
cattcggtgctcggcggcgaggaggcgtgtccggagagcagcgagcgagtggaggcggcg
tctgcagctgctgtggtgcaggtgaaaaactcgacactgaatccaaacgctaaagaattt
cttcccatcaaaggaaacgcagtcatgaaacctgctccaaccccgaccccgcctcgccca
actccacccagccctgtggtcctgcctccacctggacagcccggaggaggagcaggtgga
ggaggaggagccatctacagtaacccacctggacactacctgtcctacgtgtctccgatc
cacatccagggacactccatccaggctcctcagatgtatcagtacaccatgtcgaccgtc
aaccagggcaaatacccccgagccaaaggtccggtggtggggcagcgtccggagcaccac
ccgtctccggcctcccccatgctctccgctgcaggctcggcagcagggcctccgctggtg
gcttcaccttacccccagtcctacctgcagtacggtcaggtgatccaggccatgccgcca
cactaccacggacaggtaccgaggcagagaactgtggatttaaaggcggtttactcgatg
ctgcaggggggagcgaggatgctcacgtccggggctcctcctcaggcgatgggtcctccg
ggccctcagtacccgggccaggctgagggccagccggggccacaacaggccatgtttgct
cagtcgttctctcaccactcgggctccatccatcatcctcagccctccagcacccccacc
gggaatcagcccccaccccagcacacggcgcccagtccaggacacactcagtcgagtcag
tccggtcctcagcctcagtccatgttccactctggaggtctgtcggctcccacgcctcct
aacctgccgccaggccacagctcccctcaggcctcctacaccatgcagggttacagcctc
cccacccaccagccgctgccccatggcttcccctccatcagccagctcacacaggctcac
gtcacaggaggcatgtctggacctcatcactctgcaggtcatgggctgccccccgtcatg
ctgcactacgtcccccctcagcagggcagcggctccaacccccaacagggggcgccacaa
cacttctacatcggaccccaccaagctgttcaggtccaggctcaccccacccagcagctg
tccttccacccatctgcaaactga

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