Larimichthys crocea (large yellow croaker): 104935900
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Entry
104935900 CDS
T04659
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104935900
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
104935900
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
104935900
NCBI-ProteinID:
XP_027147664
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Position
II:2349207..2509915
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AA seq
1420 aa
AA seq
DB search
MKTCSCRQTRTCQLKKTLFLSSVRSDEERLTCSPPSRSRKCLSEETCLRLHRHHHCLTGS
LEAFHPRLTVGFEEISLGAGEERLAVSLSLSPPAAVVLPLQPPRRFIMDLWTKRVVGIIV
QVALLLSSSYGTTGEEVCDSALVSNLPPSSFRSSSQLSSSHAPGFAKLNRRDGAGGWSPL
TSDRYQWLEVSLGERTKITAVATQGRYGSSDWLTSYLLMFSDTGHNWKQYRQEDSIGSFP
GNSNADSVVQYKLQQPAIARFLRLIPLAWNPSGRIGLRLETYGCPYTSDVVSLDDSSSSS
SSSSLVYRLSPGGPRRTSRDVISLKFKTLRNSGTLLHAEGEGGLGLSLELERGKLQLLLR
QGRTSSSEPRRLASLGSLLDDQHWHHLAVERRGSHLNLTVDKHTERVQIPAEFSHWDIEQ
LSVGAVQRSQKLNFHGCLENLLYNDLNLIELAKNNDQQVTVVGNVTFSCAEPVSVAVTFP
GPQSFLQLPLPTATASSSSGGLTVGFQFRTWDKAGLLLTFALPQEGGVVWLYLSEARLRL
QIHKAGRALLELSAGSALNDGQWHSVELNSRRGRLTVSVDQEEGGVAHASSSVTAGSRLF
FGGCPAEEDGHECENPFNIFKGCMRLLSIDSRLVDLIMVQQRLLGNYSHLQIDMCGIIDR
CSPSRCEHGGRCSQSWTVFHCNCSDSGYSGATCHSSVYEQSCEAYKHNGNTSGHFYIDVD
GSGPIKPQLVYCNMTEENTWMVIQHNNTELTRLRPSPGGNQHSVHFDYSTEEEQLLAAIS
QSEHCEQELSYQCRKSRLLNTPEGSPFSWWLGGPGAGRVQTYWGGSQPGSQQCACGLQGD
CVDPQHYCNCDADRMEWTEDSGMLTHKESLPVKSLVLGDIQRPGSEAAYRVGPLSCHGDK
NFWNAAFFDKETSYLHFPTFHGELSADISFLFKTTASSGVFLENLGIKDFIRIELSSSTQ
VVFSFDVGNGPLEVRVESSAPLNDNRWHRVQAERNIKEATLRLDELPAATQEAPADGHFH
LQLNSQLFIGGTASRQKGFRGCIRSLQLNGVTLDLEERASITPGVRPGCPGHCSSYGSFC
QNQGRCVERDAGFQCDCSLSAYTGVFCHTEVSAGFKSETSVSYTFKEPYELSRNSSALPS
SIYSDMTLREENVSLSFRTNQSPAVLFYVSSYYREYLALLINKHDMLEVRYKLDGSRDVE
VLRSAAKSLADGQLHTVSIRRLTDSVSVQIDQNAREDFNLTADGEFSAIKSLVLGRIYGS
DDLDPDLARLASLGFTGCLSVVRFNSISPLKAALLHPDTSPVSITGPLIQSNCGSSSSAN
PYEAENTHHLSDQSGSVGSGQPLVNAIRTDSAVIGGVIAVVIFVIVTGLAITARFLYRRK
ETYRNQEVKGVKQDDSQDFPFNNQADSQNASGENPKEYFI
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtgtagctgcagacagacaagaacctgccagctgaagaaaaccttatttctc
tcttctgtaagatccgatgaagagcggctcacctgtagtccacccagccgatccaggaag
tgcctctctgaggaaacctgcctccgtcttcatcgtcatcatcattgtctgaccggcagc
ctggaggcatttcacccccgtctgacagtcgggtttgaggagatctctcttggagctgga
gaggagaggttggccgtctctctctctctctctcctccagcagccgtcgtgcttcccctg
cagcctccccgtcgcttcatcatggatctgtggactaaaagagtcgttgggattatcgtt
caggtcgcgctgcttctctccagctcgtacgggacaaccggagaagaggtgtgtgacagc
gcgctggtgtccaatctgccgccgtcgtccttcaggagctcctcccagctgtccagcagt
cacgcgccgggcttcgccaaactgaaccggagagacggagctggaggttggtctccactc
acctcagacaggtaccaatggttggaggtcagcctgggtgagcggaccaagatcactgct
gtcgccactcagggccgctacggcagctccgattggctgacgtcgtacctgctgatgttc
agcgacacgggacacaactggaaacagtacagacaggaggacagcatagggtcttttcca
ggtaacagtaatgcggacagcgtggttcagtacaaactgcagcagccggcgatcgctcgc
ttcctccgcctcattcctctcgcctggaatcccagcgggaggattggactccgactggaa
acctacggatgtccctacacctctgatgttgtgagcttggacgacagcagcagcagcagc
agcagcagcagtctggtgtacaggttgagtcccggggggccgaggcggacgtccagagat
gtcatttccctgaagtttaaaaccctgaggaattctgggacactgctgcacgcggaggga
gagggaggactcggcctgagtctggagttagagagaggaaagctacagctgctgctcaga
caaggtaggacttcatcctctgaaccccggcgtctcgcctctctcggcagcctgttagac
gatcaacactggcaccatttagcagtggagcggcgcggctctcacctcaacctcactgtg
gacaaacacacggagagggttcaaatccctgcagagttcagccactgggacatcgaacag
ctgagtgtgggagcagtccagagatctcagaaactgaactttcatggctgcctggaaaac
ctgctgtacaacgacctcaacctgatagaactcgctaaaaataatgaccaacaggttaca
gtagtgggcaatgtgaccttctcttgtgctgagccagtttccgtcgccgtgacgttcccc
ggcccccagagcttcctccagttgccgttgccgacagcgacggcgtcctcctcctctggg
ggcctaaccgtggggttccagttcaggacgtgggacaaggcggggcttctgctcaccttt
gccctgcctcaggaagggggcgtggtttggctgtacctgagcgaggccaggctgcggcta
cagatccataaagctggcagggcactgctggagctcagtgccggttctgctctgaacgac
gggcagtggcattcggtggagctgaactccagacgaggtcgtctgaccgtcagcgtagat
caagaagaaggaggcgtcgctcacgccagctcctccgtcaccgcgggaagtcgactcttc
tttggtggttgtcccgctgaagaagacggtcacgaatgtgaaaatcccttcaacatcttt
aaaggctgcatgcgtctcctcagcatcgatagccggctggtggacctgattatggtgcag
caaagactgctgggaaattacagtcatctgcagatcgacatgtgtggcatcattgacagg
tgttctcccagtcgttgtgaacacggcggacgctgcagtcaatcctggaccgtcttccac
tgtaactgctctgacagcggctacagtggagcgacctgccacagctctgtgtacgaacag
tcctgcgaggcgtacaaacacaacggcaacacgtcgggacacttttatatcgacgtggac
ggcagcggaccaatcaaaccgcagctggtctactgcaacatgacagaggagaacacgtgg
atggtgatccagcacaacaacacagagctcacaagactgcgaccgtctccgggtggaaac
caacattcggtccacttcgattactcgaccgaagaggagcagctgttggccgccatcagc
caatcggagcactgcgaacaggagctgtcctaccagtgcaggaagtcccgcctcctcaac
actccagagggctctccgttcagctggtggctcggtggtcctggtgccggtcgcgtccag
acttactggggtggatctcagcctggcagccagcagtgtgcctgcggcctgcagggcgac
tgtgtggacccacaacactactgcaactgtgacgccgaccgcatggagtggaccgaagac
tcgggcatgctcacccacaaagagagcctccctgtcaagtctctggtactgggagacatc
cagaggccggggtcagaggccgcctacagggtgggacccctcagttgtcatggagacaag
aacttctggaacgctgcgtttttcgacaaggagacgtcgtacctccactttcccaccttc
cacggagagctgagcgcggacatctccttcctgtttaaaaccacggcctcgtccggcgtg
ttcctggaaaacctgggcatcaaagacttcatccggatcgagctgagctcttccactcag
gtggttttctccttcgatgtgggtaacgggccgctggaggtccgcgtggaatcgagcgcc
ccgctgaacgacaaccggtggcaccgagtccaagccgagcggaacatcaaggaggcgacg
cttcgattggatgagcttccggccgccacgcaggaagctcccgctgacggacacttccac
ctgcagctcaacagccagctattcataggaggcacggcgtccaggcagaaaggctttcgg
ggctgcattcgctctctgcagctgaacggcgtcaccctggacttggaggagagggcgagc
atcacacccggggttcgacccggctgcccgggtcactgcagcagctacggatcgttctgt
cagaaccagggccgctgtgtggagagagacgccggcttccagtgtgactgcagcctgtcg
gcgtacactggagtcttctgccatacagaggtgtcggccggcttcaagtcggagacgtcc
gtcagctacaccttcaaggagccgtacgagttgagcaggaacagcagcgctctgccgtcc
tccatctactccgacatgacgctgagagaagagaacgtctccctgagcttcaggaccaac
cagagtccggctgtgctgttctacgtcagctcctactacagagagtacctggccctgctc
attaacaagcacgacatgctggaggtgagatacaagctggacggcagcagagacgtcgaa
gttttaagaagcgcagcgaagagcctggccgacggacaactgcacactgtttccatccgg
agactgacagactctgtgtccgtgcagatcgaccagaacgccagagaagacttcaacctg
acagctgacggagaattcagcgcgattaagtctctcgtgttgggcagaatttacgggtct
gatgatttggatccagacttggcccggttggcttctctcggttttaccggctgtctctcg
gtggtccgcttcaactccatcagccccctgaaagcggctctgctccacccggacaccagc
cccgtctccatcaccggacccttaatccagtccaactgcggctcctcgtcttcggccaat
ccctacgaggccgagaacacacaccacctgtcagaccagtctggctcggtgggttcaggt
caacctttagtcaatgccatcaggaccgactcggctgtgattggaggtgtcatagcggtg
gtgatctttgtgattgtgactggtctggcgataactgccagattcctctaccggagaaaa
gagacgtatcgaaaccaagaagtgaagggggtcaaacaggacgacagccaggatttccct
ttcaacaaccaggctgactcccagaacgcctccggcgaaaacccaaaggagtatttcatt
taa
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