KEGG   Larimichthys crocea (large yellow croaker): 104936056
Entry
104936056         CDS       T04659                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104936056 (helq)
Enzymes [BR:lco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     104936056 (helq)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    104936056 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 104936056
NCBI-ProteinID: XP_027137900
LinkDB
Position
IX:complement(13269432..13287937)
AA seq 1023 aa
MNSGRREVKVKRVSSRKRSRETHLQTHLQTHLQTHLTPARKRAGGDTCPQQCASSWRLRS
IMTDSRAADPSFCSDSEDLFGDYDSILDDSSVLAKLDDAEHDERRRDASDQPDFTSLRTP
KSAREDVLTDSILDVLDDEPFEDLPPSQLQFQEEVCEKAKRSRRLDGEKTSTPLRDAVRS
AEAGTGRNTEVRAAKARRSVTEQLKRTLVCNAAAPSGVSRSVVLKEAVLSEEMSVAMETV
SAESTDLGPFFGLPSKVKDLMLKLRGIRSLYDWQETCLNLDCVRDRKNLIYSLPTSGGKT
LVAEILVLRELLCRKKDCLFVLPYISLVQEKVRGLASFGLELDFMVEEYAGSKGKFPPVK
RRNKASLYIATIEKAHSLVNSLIEAGRVDNLGLVVVDELHMLGDGSRGAVIEMTLAKVLY
TSKTTQVIGMSATLGNIRDLQTFLRAENYSDDFRPVQLKEYVKLKDTIYEVDPKEEDCLR
FSRLLNFKYSSSMQKIDPDHIIALVTEVIPTHSCLVFCPTKKNCENVAGMICKYLKEDFL
RHREVEKGVLLRELKDSGNGSVCPVLRRTVPYGLAYHHSGLTSEERKLVEEAYSSGVLCL
LACTSTLAAGINLPARRVILRSPYVATDFLKRSQYKQMVGRAGRAGIDTTGESILILQDK
DRKMTLLSLRGDVLSQLLLDGGKGLLSLILSLIGLKITTSSEQLRDFLCGTLLYVQQRQL
CVDTSLWELVQRCVDVLKDKDLVTETADAHSQTLNVTKLGKATYKGSVDLSFSAALYKDL
SSGLEALMLNSFLHLVYLVTPYDMVSQCKPDWMTFFRQFTLLSDAEQKMSAAVGVPESFV
ARKAAGQTVKKSVDMQVVRRMYLALVLFTLLKETNLWSVADRFQLSRGFVQTLLSSSSAF
CSCVLHFTEELEEFWPFKALLTELTRRLSYCVKAELIPLMEVAGVMEFRAKQLYDAGYKT
LTHLANADPAILSKTIDNLFNKQANQIVASAKMLVKEKAAALQEEVDDLLMTPSDLPSET
RRL
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgaattctgggaggagagaggtcaaagtgaagagagtttcgtccaggaagaggtcacga
gagactcacctgcagactcacctgcagactcacctgcagactcacctgacacctgccagg
aagcgagcaggaggagacacctgtccacagcaatgtgccagcagctggaggctgaggagc
atcatgactgacagccgagctgctgatccatccttctgcagcgacagcgaggacctcttt
ggagactacgacagcatcctggacgacagctccgtcctggcgaagctggacgatgcagag
cacgacgaacggcggcgtgacgcctcggatcagccggacttcacgagtctgcggacgccg
aaaagcgcccgtgaggacgtcctcacagactccatcctggacgtcctggatgacgagccc
ttcgaggacttaccgcccagccagcttcagtttcaggaagaagtctgcgagaaggcgaag
cggagcaggcggctggacggagagaaaacctcgacgcctctgagggacgccgtcaggagc
gccgaggctggaacgggaagaaacacggaggtcagagcggcgaaggcgaggaggagcgtg
acggagcagctgaagaggacgctggtctgtaacgcagcagctccatccggcgtttcacgg
agcgtcgtgttgaaagaagccgtgctgtctgaggagatgagcgtcgccatggaaaccgtc
tctgcagagagcaccgacctcgggcctttcttcggactgcccagcaaagtgaaagatctg
atgctgaagctgagaggaatcaggagtttatacgactggcaggagacgtgtctgaacctg
gactgtgtgcgggacaggaagaatctgatctactctctgcccaccagcggcggcaaaact
ctggtcgcggagatcctcgtcctcagagagctgctgtgcaggaagaaagactgtctgttc
gtcttaccgtacatatcgctggtgcaggagaaggttcgcggactggcgagctttggtctg
gagctggacttcatggtggaggagtacgctggcagtaaaggaaagtttcctccagtgaag
agaagaaacaaagcctcgctttacatcgccacgatcgagaaagcccacagcctcgtcaac
tctctgatcgaggccggcagggtggataacctcggcctggtggtggtggatgagcttcac
atgctgggtgacggcagcagaggagctgtgatcgagatgacgctggccaaagttctctac
acgagcaaaaccacgcaggtgatcgggatgagcgccacgctgggaaacatccgagacctg
cagacgtttctgagggcggaaaactacagcgacgacttcagacctgtccagctgaaggag
tatgttaaactgaaggacacgatctatgaagtggacccaaaggaggaggactgcctcaga
ttctcacgtcttctcaactttaaatactccagttccatgcagaagatcgacccggatcac
atcatcgctctggtgactgaagtcattccaacacactcgtgtctcgtcttctgcccgacc
aagaagaactgcgagaacgtcgccgggatgatctgcaagtatctgaaggaggacttcctc
cgtcaccgtgaggtggagaaaggcgtcctcctcagagagctgaaggacagcgggaacggc
tcggtgtgtccggtgctccggaggacggtgccgtacggtttggcgtatcaccacagcggg
ctgacctcggaggagaggaagctggtggaggaggcctactccagcggggtcctctgcctc
ctcgcctgcacctccaccctggctgcaggcatcaacctgcccgcccgaagagtgatcctg
cgctcgccgtacgtcgccacagacttcctgaagaggagccagtacaagcagatggtgggc
cgggccggccgggccgggatcgacaccacgggagagagcatcctgatcctgcaggacaag
gacaggaagatgactctcctctcgctccgaggagacgtgctcagtcagctgctgctggac
ggagggaaaggcctcctgagtctgatcctgtcactcatcggattaaagatcaccacgtcg
tcggagcagctgagagacttcctgtgtgggacgctgctgtacgtccagcagagacagctg
tgtgtggacacgagtctgtgggagcttgttcagcgctgtgtggacgtcctgaaggacaaa
gacctggtcacggagacggcagacgctcacagtcagacgctgaacgtcaccaagctcggg
aaggcgacgtacaaaggctccgtggatctgagcttcagcgccgcgctctacaaagacctg
tccagcggtctggaggctctgatgctcaacagcttccttcacctggtctacctggtcacg
ccgtacgacatggtgtcacagtgcaagcccgactggatgacgttcttcagacagtttact
ctgctgtcagacgccgagcagaagatgtctgcagccgtcggcgtgcccgagagcttcgtt
gctcggaaagctgctggacagacggtgaagaagagcgtggacatgcaggtggtgaggagg
atgtatctggctctcgtgttgttcactctgctgaaggagacgaacctgtggagcgtcgcc
gaccggttccagctgagtcgaggcttcgtgcagacgctgctcagctcctcgtcggccttc
tgctcctgcgtgctgcacttcacagaggagctggaggagttctggccgttcaaagcgctg
ctgacggagctgacgaggcggctgagctactgcgtgaaggccgagctcatcccactgatg
gaggtggcaggagtcatggagtttcgagcgaagcagctgtacgacgccggctacaaaacg
ctgactcacctggcgaacgctgacccagcgattctctccaagaccatagacaacctgttc
aacaaacaagccaatcagatcgtagcttctgctaagatgctggtgaaagaaaaggccgcc
gctcttcaggaggaagtggacgatctgctgatgacaccgtcagacctgccgtcagaaaca
cgacgactttaa

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