Larimichthys crocea (large yellow croaker): 104936068
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Entry
104936068 CDS
T04659
Symbol
prrx1
Name
(RefSeq) LOW QUALITY PROTEIN: paired mesoderm homeobox protein 1
KO
K09329
paired mesoderm homeobox protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104936068 (prrx1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104936068 (prrx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
104936068
NCBI-ProteinID:
XP_010750337
UniProt:
A0ACD3RMQ8
A0ACD3RN32
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Position
XVII:7557400..7570599
Genome browser
AA seq
266 aa
AA seq
DB search
MTSSYAHVMDRQASIXKRLESPITSNLDNLQAKKNFSVSHLLDLEEAGEMVGTQPDGASG
TGRSMLESPGLTSGXDTTQQENEQMNTEEKKKRKQRRNRTTFNSSQLQALERVFERTHYP
DAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQPI
VPRPAPRPNDYLSWGSAAPYSWYPMPEGGPVRVPQKMLPSENNAMATYPPTCSNTNTSQG
MNMANSIANLRLKAKEYSLNQVPTVN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcgcatgtaatggacaggcaagcctcgatantcaaacgcctggag
agtccgatcacgtctaacctggacaacctgcaagccaaaaagaacttctcggtcagccac
ctgttggatctggaagaggccggggaaatggtcggcactcagccggacggagcgtcgggg
acggggaggagtatgctggagtcgccggggttgaccagcggangcgacacgacccagcag
gagaatgaacagatgaacacggaggagaagaagaagaggaagcagcgcaggaacaggacc
accttcaacagcagccagctccaggctctggagagagtgttcgagaggacacactacccc
gacgccttcgtcagagaggacctggcccgccgggtcaacctcaccgaggccagagtccag
gtttggtttcagaacaggagagctaagttccgcaggaacgagcgcgccatgctggccagc
aaaaacgcctcgctgctcaaatcttactcaggagatgtgacggcggtggagcagccgatc
gtaccgcgccctgcaccacgcccaaacgactacctgtcctggggcagcgctgctccctac
agctggtatccgatgccggagggggggccagtgcgagtgccacagaaaatgctgccctca
gagaacaacgccatggccacctacccgcccacctgctccaacaccaacacgtcccaggga
atgaacatggccaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaac
caggtgcccacggtcaactga
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