Larimichthys crocea (large yellow croaker): 104936194
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Entry
104936194 CDS
T04659
Symbol
rngtt
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104936194 (rngtt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104936194 (rngtt)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
104936194 (rngtt)
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
104936194 (rngtt)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104936194 (rngtt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
PTP-NADK
Y_phosphatase
DNA_ligase_A_M
SPN1_m3Gcap_bd
Y_phosphatase2
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
104936194
NCBI-ProteinID:
XP_010750482
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Position
XI:5063693..5148025
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AA seq
602 aa
AA seq
DB search
MSHNGPPPRWRNCPRRGQPVAGKFLPMKTMLGPRYDDQVAEENRFHPSMLSNYLKSLKVK
MGLLVDLTNTTRFYERGDIEKEGVKYVKLQCRGHGECPSKDTTEMFIRLCENFMEKNPQE
LIGVHCTHGFNRTGFLICAYLVEKMDWSVEAAVAAFSQARAPGIYKGDYLKELFRRYGDE
EDAPPAPALPEWCFDDGDDGEVDDDGNAVGQESGPSSSGSAAGKRKKEKLKLGAVFLEGI
TVKGVTQITTQPKLGEIQRKCQEMAEWDKSGFPGAQPVSMDRQNLRFLEQKPYKVSWKAD
GTRYMMLINGKNEVFMVDRDNSIFHIANLEFPFRKDPRVHLANTLLDGEMIIDKVNGQPV
PRYLIYDIIKYNGQPVGQCDFGIRLLCIEKEIISPRMEKMKIGQIDKTKEPFSVRNKPFF
DIHASRKLLEGSFTSQVSHEVDGLIFQPCGRYKAGRCDDILKWKPPNLNSVDFRLKITKV
GGEGLIPQTVGLLYVGSYDMPFANMKASKELKQYDNKIIECTFANNTWVFMRQRVDKSFP
NSYDTAMAVCKSIREPVTKEILLEYVDRCAQAVQAQNRKHAPDPDSELMPPPPPKRPNRA
IP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaacggacctcctcctcgatggcggaattgtcccagaagaggacaacctgtg
gcaggtaaattcctgccaatgaaaacgatgttgggtcccagatacgatgatcaagttgca
gaggagaacaggtttcacccgagcatgctgtccaactatttaaaaagtttaaaagtgaaa
atgggtttgctcgtggatttgacgaacactactcgcttttacgaacgcggcgacatcgag
aaagaaggcgtcaaatacgtgaagcttcagtgtagaggccacggagaatgcccttcaaaa
gacacgaccgaaatgttcatcaggctctgtgagaacttcatggagaagaatccccaagaa
ctgataggtgttcactgcacgcacggtttcaaccgcacaggctttctgatatgcgcatac
cttgtggagaagatggactggagcgttgaggcagccgtggctgctttcagccaggcccgg
gccccggggatctacaagggagactacctcaaagagcttttccgtcgctatggcgacgag
gaagacgcgccccctgcccccgcgctccccgagtggtgcttcgacgacggggatgacggg
gaagtggacgacgacggcaacgctgttggccaggagtcgggccccagctcctccgggtca
gcggctggcaaacgaaagaaggagaagctaaaactgggagcagtattccttgaaggcatc
acagtgaaaggcgtcacgcagatcaccacacaacccaaactcggagagatccaaagaaag
tgtcaggagatggccgagtgggacaagtctggttttcctggtgctcagccggtgtccatg
gaccggcaaaacctgcgtttcctggagcagaagccatacaaagtcagctggaaggccgac
ggcacacggtacatgatgctgatcaacggaaaaaatgaagtattcatggtcgacagagac
aactcgatcttccacatagcgaacctagagtttcctttccggaaggatccacgcgtccac
ttagcaaatactctgttggacggggagatgatcatcgacaaggtgaacggccagcctgtc
cctcgctatttgatatacgacatcatcaaatacaacggacagcctgtcggccagtgtgat
ttcggcatccggctgttatgcatagaaaaggagatcatttctccccggatggaaaagatg
aagatcggacagattgacaaaaccaaggagcccttcagtgtccggaataaacccttcttt
gacattcatgcgtcacgcaagctcctggaaggcagcttcacgtcccaggttagccacgaa
gtcgacgggcttatcttccagccatgcgggagatacaaggctgggaggtgtgatgacata
ctcaagtggaagcctcccaatctgaactctgtggactttcgcctcaagatcaccaaagtc
ggaggagaagggctgattccacagaccgtcggcttgctctacgtcggcagctatgacatg
ccctttgcaaatatgaaggccagtaaagagctgaaacagtacgacaacaagatcatcgag
tgcaccttcgccaacaacacctgggtgttcatgaggcagagggtggacaagagcttcccc
aactcctacgacacggcgatggctgtgtgtaaaagcatccgtgagcccgtcactaaggaa
atcctcttggagtacgtggaccgctgtgctcaggcagtccaagcccagaaccggaaacac
gcgccggacccggactctgagctaatgccccctccccctccaaagagacccaaccgggcc
atcccgtag
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