Larimichthys crocea (large yellow croaker): 104936259
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Entry
104936259 CDS
T04659
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104936259 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104936259 (abcc8)
Transporters [BR:
lco02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
104936259 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_23
nSTAND1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
104936259
NCBI-ProteinID:
XP_027128684
LinkDB
All DBs
Position
XXI:5586466..5648069
Genome browser
AA seq
1614 aa
AA seq
DB search
MISRYKPSPGSTMSLAFCGNENNSVAYNVDRGVLNNGCFLDALNVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFILLFILVCEIAEGIVSDGFSQSLHLHLYM
PAGLAFMAGITSIIYYHNIETSNFPKLLLALLIYWVLAFIMKTIKFAKYTEHGIGPGQLR
YCITGLLVLLYGLLLAVEINVILGRRYVCFADPTEVKPPEDLQDLGVRFLQPFVNLLSKA
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYMKLRKAFEDQKRPQGTAPQGPKLIW
QALRKAFGRPLILSITFRFLADLLGFAGPLCISGIVYHISKDNRTIQPPMKLLGIYFISS
KEFLENAYVLAVLLFLALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMS
MGELTVAQICNLVAIDTNQLMWFFFLCPNLWAMPIQIIVGVILLYYLLGISALIGATVIA
VLAPVQYFVATKLSQTQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCDSVEETRGK
ELTSLKAFALYTSISIFMNAAIPIAAVLTTIVVHVHISDDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGDEQEPRALLTSGSSNHNQNRYQAVSSSK
PFPSSSSSRHLQPLKVVNRKRPPRDDWNNYSSQGDHEGDRAPQIMDQDICIKITSGYFTW
TDGPPTLCNVDINIPFGKLTMIVGQVGCGKSSLLLAALGEMQRVSGIVTWNSLPNLESEG
DESPTDRDAASDGDIRTRGAVAYASQKPWLLNATLVENITFEMPMIKPRYKAVIEACSLQ
PDIDILPQGDQTEIGERGIILSGGQKQRISVARALYQQTNLVFLDDPFSALDIHLSDHLM
QDGILKMLREEKRTVVLVTHKLQYLPHADWIIAMKDGTIQTEGTLKDIQNSEPELFEQWK
TLMHREDQEFETETVAASMTDLERKNLRRAMYSREAGRTEEDEEDESVESDDDDNLSQVM
RQRATIPWRSCGTYLSSAGLLLLTLLLLSQLLKHTLMVTIDYWLAHWTSHVIAAKIDATA
KNCTIVQDCGFSHSWYLSVFSVLCCLGIILCLATSVAVEWTGLKVAKELHHNLLNKIILA
PMRLFETTPLGSILNRFSTDTNTIDQHIPTTLECLSRSTLLCVSALGVISYVTPVFLIAL
LPLAVTCYFIQKYFRVASRDLQQLEDSTQLPLLSHFSETVEGLTTIRALRYEPRFRQRLL
QFTDANNIASLFLTAANRWLEVRMEYVGACVVLVAAVASITNSLYNQLSPGLVGLGLTYA
LMVSNYMNWMVRNLADMEVQLGSVKRINSLLKTEPENYEGLLTVSQVPDGWPRQGEIKIQ
NLSVRYDATLKPVLKNVNAQISPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIVIDDI
DIAKLPLQTLRSRLSIILQDPILFSGTIRFNLDPEMKATDEMLWEALDIAQLKPVVKSLP
GGLDATVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAF
ADRTVVTIAHRVHTILNADLVIVMKRGIILEYDRPEALLEKEDSVFTSFVRADK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacgatataaaccgagtcccggctccaccatgtccttggcgttctgtggcaac
gagaataactcggtggcctacaatgtggacagaggggttctgaacaacggctgtttcttg
gatgcgctcaatgtggtgccacacgtcttcctcctctttatcacctttcccatcctcttc
atcggctggggcagccagagttcaaaggtgcacatccaccacagcacctggctccacttt
cctggtcacaacctgcgctggctgcttaccttcatcctgctcttcatcctcgtctgcgaa
atcgcagagggcatcgtctctgatgggttcagccaatccctccatcttcacctgtacatg
cctgcaggtctggccttcatggctggtatcacgtctattatctactatcataacatcgag
acctccaactttcccaaactactactagccctgctgatctactgggtgctagccttcatc
atgaagaccatcaagttcgccaagtacaccgagcatggcatcggccccgggcagctacgc
tactgcatcaccggactgctggtgctgctgtatggactcttactagccgtggagatcaac
gtcatcctgggcaggcgctatgtgtgttttgccgacccgacagaggtgaagcctcctgag
gacctccaggacctcggtgttcgtttcctgcagccctttgtcaacctgttgtccaaagcc
acctactggtggatgaacactttcattacctccgctcacagacgaccaatcgacctcaag
gtcatcgggaaattgcccatcgcaatgagagccctcaccaactacatgaagctacgcaag
gcctttgaagaccagaagaggcctcagggcacagcaccccagggcccaaagctgatctgg
caggctttgaggaaagcgtttggcagacctctcatcctcagcatcacattccgtttcctg
gctgatctgctgggctttgccggtcctctctgcatctctggcattgtctaccacatcagc
aaggacaaccgcaccattcagccaccgatgaaattgctggggatctatttcatttcctcg
aaagagtttctggagaatgcatatgtgctggccgtgttgctcttcctcgccctgctcctg
cagaggacgtttctccaggcctcctactacgtggccattgaaacaggcatcaacctgcgg
ggggccatacagacaaaaatctacaacaagatcatgcgtctgtgcacctctaacatgtcc
atgggcgagttaactgttgcccagatctgcaacctggtcgccatagatactaaccagctc
atgtggttcttcttcctctgtcctaacctgtgggccatgccaatacagatcattgtggga
gtgatcctgctctactacctcttgggaatcagtgccttgattggagcgactgtcatcgcc
gtgttggctcctgtacaatattttgtggccactaagctgtcccaaacacaaaagagcact
ctggaatactctagtgaacgtctgaagaagaccaatgagctgctgcggggcatcaagctg
ctgaagctgtatgcctgggaacacatcttctgtgacagtgtggaggagaccaggggcaaa
gaactcaccagcctgaaggccttcgctctttatacatccatatccattttcatgaatgca
gctattcccatcgcagctgtattgacgacgattgtggttcatgttcacatctctgatgac
gctgatctgtccccagctgtggcctttgcctctctgtctctcttccacatcctggtcacc
cccctcttcctgctctccagtgtggtgcgctccaccgtcaaagctcttgttagcgttcag
aagctcagcgagtttttctcaagcgatgagattggagacgaacaggagcccagagcattg
ttaacctctggctccagtaatcacaaccaaaatagataccaggctgtgtcatcctctaaa
cctttcccttcgtcctcctcctcccgacacctccagcccctgaaggtggtaaacaggaag
cgccccccgagggatgactggaacaactacagctcacagggggatcatgagggcgacaga
gccccccagatcatggaccaagacatttgtatcaagataactagcggttatttcacctgg
accgatggacctccaacactttgtaatgtggacatcaatattccttttggtaaactgaca
atgattgtgggccaggtgggctgcggtaaatcatctctgttgctggcagcgctaggagag
atgcagagagtatcaggaatagtcacctggaacagcttgccaaacctggagtccgaggga
gacgaaagtcccacagacagagatgcagccagtgacggagacatcaggacgagaggcgct
gtggcctatgcttcccagaagccctggctgttgaatgcaacactggtggagaacatcacc
tttgagatgcccatgatcaaaccgaggtacaaagctgtcatcgaggcctgttctcttcag
cctgacatcgacatccttccacagggggaccagacagagatcggggaacggggtatcatc
ctgtcaggtggacagaagcagcgtatcagtgtagccagagccttgtaccagcagaccaac
ctggtctttctggatgatccgttctccgccttagacatccacctgagtgaccatctaatg
caggacggcattttgaagatgttgagagaggagaagaggacggtggtgttggtcacgcac
aaacttcagtacctaccacatgcagactggatcattgccatgaaagatggcaccatccag
actgaggggactctgaaggacatccagaactctgagcctgaactctttgagcagtggaaa
accttgatgcacagagaggaccaggagttcgagacggagacggtggcagcgagcatgaca
gatctggagaggaagaacctgcggagggccatgtactccagagaggctggcaggactgaa
gaggacgaggaagacgaatctgtagagagcgacgacgatgacaatctgtcacaggtgatg
cgtcagcgtgccactatcccctggcgttcctgtggcacctatctgtcctccgccgggctc
ctcctgctcaccctgctcctcctgtcacagctcctcaaacataccctcatggtcaccatt
gactactggctggcacactggacgtcacacgtcatcgcagccaagatcgatgccacagcg
aaaaactgtaccattgttcaggactgtggcttcagtcactcatggtatctgtcggtgttc
agtgtgctgtgctgcctcggcatcatcctgtgtctggccacctctgtggctgtggagtgg
accggcctcaaagtggccaaggagctccaccataacctgctcaacaagatcatactggcc
cccatgaggctgtttgagacgactccgctcggcagcatcctcaacaggttttccacggac
acaaacacaatagaccagcacatccccaccaccctggagtgcctctcccgctccaccctg
ctgtgtgtgtccgccctgggcgtcatctcgtacgtgacgcccgtcttcctcattgcactc
ctgccgctggctgtcacctgctatttcatccagaaatactttcgggtggcctccagggac
ctgcagcagttggaggacagcacccaactccctttactctcccacttctctgagacagtg
gaaggtctcaccactataagggctctcaggtacgagcccaggttcagacagaggttacta
cagttcactgatgccaacaacatcgcctctctctttctgactgcagccaaccgttggctg
gaggtccgcatggaatatgttggagcctgtgtggtgttggtggcagctgtagcctccatc
actaactctctctacaaccagctgtcccccggtttggttgggctgggactgacatacgca
ctcatggtctcaaactacatgaactggatggtgcgtaatctggcagacatggaagtccag
cttggctcagtcaagaggattaacagcctgctcaaaactgaaccagagaattacgagggt
ctgctcactgtgtctcaggtccctgacggctggccccgacagggagagatcaagatccag
aacctgagtgtccgatacgacgccacgctgaaacccgtgctcaaaaatgtcaacgcacag
atcagccccggacagaaggtgggtatctgtggcaggacaggcagcggcaaatcctctttc
tcattggctttcttccgcatggtggatatgtttgaagggaggattgtgattgatgacatc
gacatcgcgaagctgcctctgcagaccctcaggtctcgcttgtccattatcctccaagac
cccatcctgtttagcggcaccatccggttcaatctggacccagagatgaaggctacagat
gagatgctctgggaagctctggacattgctcagctgaaacctgttgttaaatcccttcca
gggggcctggatgccacggtgacagagggaggagaaaacttcagtcagggtcagagacag
ttgttctgtctggcccgagctttcgtcaggaagagcagcatcctcatcatggacgaagcc
acggcgtccatagacatggcaacggagagcatcctgcagaaagtggtgatgaccgctttt
gctgaccgcacagtagttactatagcacatcgcgtccacaccatcctgaatgccgacctg
gtgattgtgatgaagcgggggatcatcctggagtacgacaggcccgaggccctgctggag
aaggaggacagcgtcttcacctcctttgtacgagcagacaagtag
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integrated database retrieval system
