Larimichthys crocea (large yellow croaker): 104936348
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Entry
104936348 CDS
T04659
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104936348 (trmt13)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104936348 (trmt13)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104936348 (trmt13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
104936348
NCBI-ProteinID:
XP_027143517
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All DBs
Position
XIV:complement(12310564..12315696)
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AA seq
463 aa
AA seq
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MAAPMPGRCFFFVEKKKRFCKMRVSGGKTYCGEHATEEGGSRRIACPLDPKHTVSEDKLD
KHLKRCNSREKAKPVYYVENINSGSGDTDEALQQVTRTQVSLSEHSRTQLEALLDKLKAA
VTGLPCDVEDSVLSHPVLQEELHNPKNGDSAHKHLKQQSSILGHLEAMGLLSRGRCFVEF
GAGRGKLSHWIHEALKTDEHLKTDEHLQTDDDLQLLLVERCSTRFKVDGKHQDVGVQFER
LQVDIQHLDLSKVPLLTQKKLPLVGVGKHLCGAATDLALRCLLETPRPKPETEPPRKRLK
TSEPADPAALPETDPGLDCGPGPVLGLAVALCCHHRCEWRHYVGQQFFLQRGLGAKEFSA
FCRMSSWATCGLRPTNQDPPPPDPTNQREEGEEHEAAEESDTVSGFLSAAERERVGRLCK
HLIDAGRLHFLKTKGFDSKLRRYVNAQVTLENVLLTATPSASS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatgcccggcagatgtttcttcttcgtggagaaaaaaaaaagattctgc
aaaatgcgcgtgagtggcgggaaaacttactgcggggagcacgcgacggaggaaggaggc
agcaggaggatcgcgtgtcctctggaccccaaacacactgtcagtgaagacaagctggac
aaacacctgaagagatgtaactcgagagagaaagccaaacctgtttattatgtggagaat
atcaactctggatcaggtgacacagacgaggcactccaacaggtaaccagaacacaggta
agtctgtctgaacatagccggacacagcttgaggctctgctggacaaactgaaggctgcc
gtcacaggtctgccatgtgatgtggaggacagtgttctgtctcatcccgttctccaggag
gaactccacaacccaaagaacggagactctgcccacaaacacctgaaacagcagtcctct
atcttaggtcacctggaagcaatggggctactcagcagagggcggtgctttgtggagttt
ggagcaggtcgagggaaactgtctcactggatccacgaagccctgaagactgatgagcac
ctgaagactgatgagcacctgcagaccgacgatgacctccagctgctgctggtggagcgc
tgcagcacccgcttcaaggtggacgggaaacatcaggatgttggagttcagtttgagagg
ctgcaagtcgacattcagcatctggatctaagtaaagtccctctgctcacacagaagaaa
ctcccgttggttggagtcggaaaacacctttgtggagcagcaacagatctggctctacgc
tgtttgttggaaacaccacgacccaaaccagagaccgaaccgccccgaaaacgcctcaag
acctcagaaccagctgatccagcagcactgccagagactgatccaggtctagactgtggt
cctggtccagtactgggcctggcggtggcgctgtgctgccaccatcgctgcgagtggcgt
cattacgttggtcagcagttcttcctgcagcgaggactcggagccaaagagttctccgct
ttctgccggatgtccagctgggccacatgtggactcagaccgaccaatcaggaccctcca
cctcctgatccgaccaatcagagagaagaaggagaagagcatgaagcagcagaagagtcc
gacactgtgagcgggtttctgtcggcggctgaacgtgagcgcgtcggtcgtctctgtaaa
catctgatcgacgccggcagacttcacttcctgaagacgaaagggttcgacagcaaactg
agacgttacgtgaacgctcaggtaacgctggagaacgttttactgactgccacgccctct
gcatcatcatga
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