Larimichthys crocea (large yellow croaker): 104936357
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Entry
104936357 CDS
T04659
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104936357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104936357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104936357
Membrane trafficking [BR:
lco04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104936357
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104936357
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104936357
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BAR
PH_21
PH_11
TPR_TTI1_N
ALA1
PH_8
PH_alsin
Motif
Other DBs
NCBI-GeneID:
104936357
NCBI-ProteinID:
XP_027144402
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Position
XV:12210470..12270536
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AA seq
841 aa
AA seq
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MTVDFEECIKDSPRFRANIDEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIINYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
TKKNFDRVREDLEIAQVKNAQAPRNKPHEVEEASGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDDIDPYMKKLAAELDQLVIDSAMEKREMEHKH
ATIQQRTLLQDFSYDDSKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPSKSCMLQAESEKLRQAWIQAVQA
SIASAYRESPDTYYIEHLDRTASPSTSSIDSASEPRERIVRGETILQRIQCLPGNEQCCD
CGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSVIN
HIYEGSYQEQGLKKPLPSSSRQEKEAWIKAKYVEKKFLKKLGSTEILINGERKSERRWSV
KKCRRHNSATTVPKARRRYRQEPGSTSPSTLSAAAAKFRRDSLFCPDELDSLFSYFDTGS
GPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEECEVSEDSSGEAELEAEPETSDPE
DIRDLHPGALLYKASKARNLPVMAEALAHGADVNLVNEEDEGKTPLIQAVIGGSLIACEF
LLQNAADVNQRDTRGRGPLYHATYLGHTGQVCLFLKRGATQNDGDEDGQDPLSIAVQQAN
ADIVTLLRLARMNEEMRESEGPFGQPGDATYLDIFREFSHMASHNPEKLKRRSVHFRHSF
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagaatgtattaaagattcaccccgatttagggcgaacattgat
gaagtggagacggaggtggtggagatcgaggccaaactagataagctggtgaagctatgc
agcgggatgattgaagcagggaaggcgtacgtcagcgccaacaagctctttgtcaacggc
atccgggatctgtcccagcagtgcaagaaggacgagatgatctcggagtgcctggaaaag
tgtggtgaaagcctccaggaaatcatcaactaccacatgatcctgttcgatcaagctcag
cgctctgtgaagcagcagttgcacaactttgtgaaagaggatgttcggaagttcaaggag
acgaagaaaaacttcgaccgggtgcgtgaggatctggagatagcgcaggtgaagaacgct
caggcgccgaggaacaaacctcacgaggtggaggaagcctccggcaccctgagcatcacg
agaaagtgcttcagacacctcgctctggactacgtgctacagatcaacgtcctccaggcg
aagaagaaatttgagatcctagacgctatgctgtcgttcatgcacgctcagtactcgctg
ttccagcagggctacaacctgctggatgatatcgacccgtacatgaagaaactggctgcc
gagctcgatcagctggtgatcgattcagccatggagaagagggagatggagcataaacat
gcaaccattcagcagaggactctcctgcaggacttttcatatgacgactcaaaggtggag
ttcaacgtggacgctcccaatggtgtggtgatggagggatacttgttcaagagggccagc
aacgcctttaagacctggaacaggcggtggttctccatacagaacagtcagctggtctat
cagaagaagctcaaggattcgctgacggtcgtggtcgaagatctccgactgtgctccgtt
aaaccgtgcgaggacatcgagaggaggttctgcttcgaggtcgtctccccgtccaagagc
tgcatgcttcaggctgagtccgagaagctgaggcaagcgtggattcaggcagttcaagcc
agcatcgcctccgcctacagagagagcccggacacctactatatcgagcatctggaccga
acggcttctccgtccaccagtagtatcgattcggccagcgagccgcgggagcgcattgtc
cgaggggagaccatcctgcagaggatccagtgtctgccggggaacgagcagtgctgcgac
tgcggccaggctgaccctcgctgggcctccatcaacctgggcatcctgctgtgtatcgag
tgctccggcatccacaggagtctcggagttcactgttcgaaggttcgctcgctcacactg
gactcgtgggaaccagaattattaaagttgatgtgtgagcttggaaacagcgtcatcaac
cacatctatgaaggctcataccaggaacaaggtctaaagaaaccgttaccgtccagttca
aggcaggagaaagaggcttggatcaaagcgaagtacgtagagaagaaattcctgaagaag
ctcggctccacggagatactcatcaacggagagaggaagtcggagcggcggtggagcgtg
aagaagtgtcggagacacaacagcgccaccacggtaccgaaagcacgccggagataccga
caagagcccggaagcacctccccctccaccctctccgcagctgctgctaagttcagacga
gactccctgttttgtcctgacgagctggactctctcttctcttactttgacaccggatct
gggcctcgaagtccggcaggcctgagcagtgacagcgggttgggaggcagcacagacggc
agcacagacatcctggtgttcggctccgtggtggacagcgtgacagaggagtgtgaggtg
tccgaggattcgagcggtgaagctgagctggaggctgagccggagacgtcggacccggag
gacatcagggaccttcatcccggagcgctgctctacaaagcctcgaaagcccgaaacctg
cccgtcatggccgaagcgctcgcccacggggccgacgtcaacttggtgaacgaggaggac
gaaggaaagacgcctctcatacaggccgtgatcgggggttcattgatcgcctgcgagttc
ctgctccagaacgccgctgacgtcaaccaaagagacacgagagggaggggcccgctgtat
cacgccacatatctgggacacacggggcaggtgtgtttattcctgaaaagaggagctaca
cagaatgacggcgatgaagacggtcaggaccctttgagcatagctgtacagcaagccaac
gctgatatcgtcacactgttgcgtctggcccggatgaacgaggagatgcgggagtccgag
ggaccgtttggacaaccaggagacgccacataccttgacatcttcagggagttttcccac
atggcgtcccacaacccggagaagctgaaacgaaggagtgtgcacttcaggcactccttc
aggtag
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