Larimichthys crocea (large yellow croaker): 104936392
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Entry
104936392 CDS
T04659
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104936392 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104936392 (myo5b)
04131 Membrane trafficking [BR:
lco04131
]
104936392 (myo5b)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104936392 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104936392 (myo5b)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104936392 (myo5b)
mRNA cycle factors
P-body specific factors
104936392 (myo5b)
Membrane trafficking [BR:
lco04131
]
Others
Actin-binding proteins
Myosins
104936392 (myo5b)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104936392 (myo5b)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104936392 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
104936392
NCBI-ProteinID:
XP_027138043
LinkDB
All DBs
Position
IX:complement(13547109..13574813)
Genome browser
AA seq
1780 aa
AA seq
DB search
MASDYYPYSKPLEYPVGPKRNPLPFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLES
NHIYTYCGIVLVAINPYEQMQIYGEEVITAYSGRNMGDMDPHIFAVAEEAYKQMARDERN
QSIIVSGESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDN
SSRFGKYIQIGFSRRYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKD
LRLTSAEDFTFTSLGENIFIEGVNDAEDFQKTREAFTLLGIKDSSQSSIFKVVASILHLG
NIEICSERDGESCHISRDDLHLKHFCQLLGVELQQMEHWLCHRKLVTASETYVKNMSSKQ
AINARDALAKHIYARMFDWIVEHINMALQTSSKQHSFIGVLDIYGFETFEVNSFEQFCIN
YANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKV
PKGTDQNWAQKLYKQHSSSAHFQKPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQ
INILKASQFQLVADLFHDKDDVASSKSSRVNVRAAKSTPKGPNKEHRKTVGHQFRSSLHL
LMETLNATTPHYVRCIKPNDNKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPD
FFSRYRVLLKKSDMTSTDKKLVCRNLLETLIKEPDMYQFGKTKIFFRAGQVAYLEKLRAD
KFRSACIMIQKTVRGWLQRVRYRKIRKSAITLQRYGRGYLARRYADFLRLTRAALVCQKQ
FRMVRDRQAYLRVRQAVVTIQAFTRGMFTRRIYQEFVLHHKAMVIQRSVRGWLQRRKFRR
ARAAAVIIQCAWRRRRAKRQLQQLKIEARSAEHLKKLNTGMENKIVQLQRKMDDQSKEYR
AQNEQLLVVNTSLGSEVNKLQKQLEQIQSQRGGEGGQLTSLQEELERLREELKEASALRK
KMEEEHGTEKLDLQQRVEELEEENSLLKSEKEELNRRIVQNSKSFDEDGSSVSLQKDLDQ
ERQRYQNLLKEFSRLEQRYDNLKEELTLTKFQPGHRRNPSNQSSLESDSNYPSISTSEVG
DTEDSVQLVEELGVEKAAMDISLFMKLQKRVRELEQERKRLQASVDKMEELTKSKGSESR
SPPSEQETADLAYNNLKRQELETENKKLKDDLNTLRKSISERASQNSSSNELQDSYNLLL
SQLKSANEELDARKEEVLILKSQIVSNAQLQEKNDLITERNEVLELNNSKEPLDKDEALK
ACHGLTEAKKLLEAQLQTQSRQHKDELEALHTQIELLRDDIEKKQEILNYTSSLSPEARV
EFSIQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEASQAAAQTSKSRP
ELSRQVTVQRKEKDFEGMLEYYKEDEGLLLKTLITDIRPNTVSATVPCLPAYVLFMCIRH
ADYINDDQKVESLLTSTINSIKKVLKKNNEDFEMTSFWLANTSRLLHCLKQYSGDEVFMT
QNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLA
GVKPMGYRNRSSSMDTDAGGPSSYTLEALIRQLGQFHATMRDHGLDPEIVGQVVRQLFHC
INAVSLNNLLLRKDVCSWSTGMQLRYNTSQMEEWLRANNLYQSKAAATLEPIIQAAQLLQ
VKKKTTQDAEAICSLCSGLTTQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQDRNDPP
QLLVDTKQTFPVLFPYTPSALSLETLHIPASLGLDFLIRV
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgattactacccgtactccaagcctctggagtaccctgtgggtccaaagcgt
aacccccttcctttcctccgtaaccccgacatcctggttggggagaatgacctcactgct
ctcagttacctgcatgaacctgctgtcctgcacaacctcagagtccgcttccttgagtcc
aaccacatctacacgtactgcgggattgtgctggtggccatcaacccgtatgagcagatg
cagatctacggagaggaggtgatcacggcctacagcggtcggaacatgggcgacatggac
cctcacatcttcgccgtggctgaggaggcctacaagcaaatggccagagatgagaggaat
cagtcgatcattgtgagcggagaatccggagcaggaaagacggtctctgcgaagtatgcc
atgcgtttctttgccacagttggtggctcggccaatgacacgaacgtggaggagaaggtt
ctcgcctccagccccatcatggaggcgatcggaaatgcaaagaccactcggaacgacaac
agcagtcgcttcgggaagtacatccagatcgggttcagccggcgttatcacataatcggt
gccaacatgagaacatacctgctggagaagtcacgggtcgtttttcaggctgaggatgag
aggaattatcacatattctaccagctgtgtgcctccgccagtttacctgagttcaaagac
ctccgcctcaccagcgcagaggacttcaccttcacgtctttaggtgagaacatcttcatt
gagggagtgaacgacgcagaagactttcaaaagacccgagaggccttcacactgctgggg
ataaaggacagcagtcagagcagcatctttaaagtcgtcgcgtccatccttcatctggga
aacattgagatctgctcggagcgagatggagagtcatgtcacatctcaagggacgacctc
cacctgaagcacttctgccagctgctgggcgtggagctgcagcagatggagcactggctc
tgtcacaggaagttggtcactgcgtctgagacgtacgtgaagaacatgtccagcaaacag
gccatcaacgcccgcgacgcgctcgctaaacacatctacgcacgcatgttcgactggatc
gtggagcacatcaacatggccctgcagacctcctccaaacagcactccttcatcggagtc
ctggacatttacgggttcgagaccttcgaggtgaacagcttcgagcagttctgcatcaac
tacgccaacgagaagcttcagcagcagttcaactctcatgtgtttaagttggagcaggag
gagtacatgaaggagcagatcccctggactctgatcgacttctatgacaaccagccctgc
atcgacctgatcgaggctcgactcggcatcctggacctgctggatgaagagtgtaaagtg
ccaaaggggacggatcagaactgggcccagaagctctacaaacagcactccagcagcgct
cacttccagaaacctcgtatgtccaacacctccttcatcatcatacacttcgccgataag
gtcgaatatcagtgtgaaggcttcctggagaagaacagagacaccgtgtacgaggagcag
atcaatatcctgaaggccagccagtttcagctggttgcagatctgtttcatgacaaagac
gacgtcgcctcctcaaagtcgtccagagtgaatgtccgagccgccaaatcgactcccaaa
ggcccgaacaaagagcaccgcaagaccgtgggacaccagttccgctcctctcttcatctt
ctcatggagactctgaacgcgacgactcctcactacgttcgctgcatcaaaccaaacgat
aacaaggaggccttctcgttcgattcgaggcgagcggtgcagcagctcagagcctgcgga
gtcctggagaccatccggatcagcgccgctgggtatccatccaggtggacgtacccagat
ttcttcagcaggtatcgagtgctgctgaagaagtctgacatgacgtcaacagacaagaaa
ctggtctgtagaaacctgctggagactctaatcaaggagccggacatgtaccagttcggt
aagacaaagatcttcttccgggccggacaggtggcgtacctggagaagctccgggccgat
aagttccgctcagcctgtatcatgatccagaagacggttcgaggttggctgcagagagtc
cgataccgaaagatccgcaagtctgccatcactctgcagagatacggccgcgggtacctg
gcccgcagatacgccgacttcctgcgcctgactcgagcggcgctcgtctgtcagaaacag
ttccgcatggtgagagatcgacaggcgtacctgagagtgagacaggctgtggtcaccatc
caggccttcaccagagggatgttcacccgcaggatctaccaggagttcgtcctccaccac
aaagcgatggtcatccagaggagcgtccgtggttggctgcagaggaggaagttccggcga
gctcgtgcggcggccgtcatcattcagtgtgcgtggaggaggcggcgagccaagcgtcag
ctgcagcagctgaagatcgaagctcgctctgcagaacacctgaagaaactcaacacgggc
atggagaacaagatcgtccagctgcagaggaagatggacgaccagtcgaaggagtaccgg
gctcagaacgagcagctcctggtggtaaacacctcgctgggctcggaggtgaacaagctg
cagaagcagctggagcagatccagagtcaacgtggaggagaaggaggtcagctgacatct
ctgcaggaggagctggagaggctgagggaggagctgaaggaggcgtcagccctgaggaag
aagatggaggaggagcacggcaccgagaaactggatctgcaacagagggtggaggagttg
gaggaggagaactctctgctgaagagcgagaaggaggagctgaaccggaggatcgttcag
aactcaaagagctttgacgaagacggcagcagtgtgtccctgcagaaagacctggaccag
gagcggcagcggtaccagaacctcctcaaagagttctccagactggagcagagatacgac
aacctgaaggaggagctgactctgaccaagttccagcccggccacaggagaaacccgtcc
aatcagagcagcctggagtcggactccaactacccgtccatctccacctcggaggtcgga
gacaccgaggactccgttcagctggtggaggagctgggcgtggagaaggcggcgatggac
atcagtctgttcatgaagctgcagaagagagtccgagagctggagcaggagaggaagagg
ctgcaggccagcgtggacaagatggaggagctcaccaagagcaagggttctgagtcgagg
agtccgccctccgagcaggagactgcagatctggcctacaacaacctgaagagacaggaa
ctggaaactgagaacaagaaactgaaggatgacctgaacacgctgaggaagtccatctct
gagcgtgcgtctcagaacagttcgtcaaatgaactgcaggatagctacaacctgctgctg
agtcagctcaaatcagccaatgaggagctggatgcccgcaaggaggaagtcctgatcttg
aagagtcagatcgtcagcaacgctcagctgcaggagaagaacgatctcatcacggagaga
aacgaagttcttgaactgaacaacagcaaagagccgctggacaaagacgaggctctcaaa
gcttgtcatggactgacggaggccaagaagctcctggaggctcagctgcagacccagtcc
aggcagcacaaagacgagctggaggctcttcacactcagatcgagctgctgagagacgac
atcgagaagaagcaggagatcctcaactacacctcgtccctgtccccggaggcccgggtg
gagttcagcatccagcaggagatcacacggctcaccaacgacaacctggacctcaaggag
ttggtggagaaactggagaagaacgagaggaagctgaagaagcagctgaggatctacatg
aagaaagtccaggagctggaagcttctcaggccgccgcccagaccagcaagtccagacca
gaactgagtcgtcaggtgacggtccagaggaaggagaaggatttcgaagggatgctggag
tactacaaggaggatgaaggcctgctgctcaaaactctgatcacagacatcaggcccaac
accgtgtcggccaccgttccatgtctgccagcttatgtccttttcatgtgtatccgccac
gctgactacatcaacgatgaccagaaggtggagtctctgctcacctccaccatcaactcc
atcaagaaggtcctgaagaagaacaacgaagactttgagatgacgtccttctggttggcc
aacaccagccgtcttctccactgtctgaagcagtacagcggtgacgaggtgttcatgacg
cagaacacggcaaaacagaacgaacactgtctgaagaactttgacctagcagagtaccga
caggtgctgagcgacctctccatccagatctaccagcagctcattaaggtggccgagggc
atcatccagcccatgatcgtgtcggccatgttggagagtgagagcatccccagcctggca
ggcgtgaagccgatgggctacaggaaccgttcctccagcatggacactgacgccggcggg
cccagcagctacactctggaggcgctgatccgccagctgggacagtttcatgccaccatg
cgggaccatggtttggaccccgagatcgtgggtcaggtggtgcgacagctcttccactgc
atcaacgccgtctcactgaacaacctgctgctgcgcaaagacgtgtgctcgtggagcact
ggcatgcagctcaggtacaacaccagtcagatggaggagtggctgagagcgaacaacctg
tatcagagtaaagctgcagccacgctggagcccatcatccaggccgctcagctgctgcag
gtgaagaagaagacgacgcaggacgccgaggccatctgctcgctgtgcagcggcctcacc
acgcagcagatcgtgaagatcctgaacctctacacgccgctcaacgagttcgaagagagg
gtcaccgtgtcgttcatcaggaacattcagaatcgtctccaggacagaaacgatcctcct
cagctcctcgtggacaccaagcagacgttcccggtcctcttcccgtacacgccgtccgct
ctcagcctggagacgctgcacattcccgcctcgctcggcctcgacttcctcatccgggtc
tga
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integrated database retrieval system
