Larimichthys crocea (large yellow croaker): 104936465
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Entry
104936465 CDS
T04659
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104936465 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104936465 (taf6l)
03036 Chromosome and associated proteins [BR:
lco03036
]
104936465 (taf6l)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104936465 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
104936465 (taf6l)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104936465 (taf6l)
STAGA complex
104936465 (taf6l)
TFTC complex
104936465 (taf6l)
SAGA complex
104936465 (taf6l)
SLIK complex
104936465 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
IL31
Motif
Other DBs
NCBI-GeneID:
104936465
NCBI-ProteinID:
XP_010750800
UniProt:
A0A6G0HI20
LinkDB
All DBs
Position
XI:23149375..23155174
Genome browser
AA seq
645 aa
AA seq
DB search
MADREERRFAEVSRDSVKLMAESTGVELGDDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSNVEAVCGYGAQDALPFRSVKEGELFFIEDRDINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPTAVQSLSDDLLKYYQQITRGILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQPAEGGTSGQPGSVGGAMGYRVSSPGLSPPPEPLSEAALGIA
THLQAGVAGCPWEEWTPVPLPAMYCELYSFFGDSLAVRFSTGPGFGSYPPYTPTQPSDAR
KEPPGPASKPDTARKMPQLTANLNISPRQDGSPRTDPPPPSLAATGSGRSLARSSSSSSS
SSVQRSRSSSSRSGQRSAGLSRDVFPKARFTSPQAGPPAFTFLIGGRQMGRRCQGRRPFQ
TTFAPTPPLSAIPPRAYAHKLPVIGRVGKPVRRWACSHYSLHLPL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtgaggagcgccgcttcgccgaggtctcccgggactctgtcaaactcatg
gccgagagtacaggtgtggagctcggcgacgacgtggccgctctgctggctgaggacgtt
tgttaccggctcagggaggcgacccagagcagctcccagttcatgagacatgccaagagg
aggaagctgacagtggaggacttcaacagagctctgcgctggagcaacgtggaggctgtt
tgtggctacggggcccaggacgctctacctttccgctcagtaaaagaaggagaacttttc
ttcatcgaggatcgagacatcaacctggttgagttggctctggccaccaacattcctaag
ggctgtgctgagaccatggtgcgagtgaatgtgtcttacctggatggaaaaggtaacctg
gagcctcaggggaccgttccgacagccgtgcagtctctgtcagacgacctgttgaagtac
taccagcagatcacgcgaggcatcctgggagaggacccacacctcatgaaggtggctctg
ctggacctccagtccaactccaagatcgctgccctcctgccatactttgtttatgtcatc
agtggggtgaagtcagtaagtcatgatctggagcagctcaacaggcttctccacatggtg
aagagcctggtccagaacccttacctgtacctgggctcatacgtgcgcagcctggtctcc
agtgtcatgtactgcatactggagccgctggctgcctccatcaacccactcaacgaccac
tggaccctcagggactacgcagccctgctcctcagccacatcttctggactcatggtgat
ctggtgagtggactctaccatcagatcctgctgtcacttcaaaaggttctgtctgaccca
gtgagaccgctctgctcacattacggagccgtggtggggcttcatgctctgggatggaag
gctgtcgagagagtgctcttcccacaccttcctgcctactgggccaacctccaggccgtg
ctggatgactactctgtttctaacgctcaggtcaaagcagatggacataaggtgtatgga
gccatcctggtggcagtggagcgcctgctgaagatgaaggctctgtctctgtctcagcca
gcagagggaggcaccagcggtcagccgggctctgtggggggtgctatgggttacagggtg
agctcccctggcctcagcccccctccagagcctctgtcggaggctgctctgggaatcgcc
actcaccttcaggcaggcgtggccggctgtccctgggaggagtggaccccggtgcctctc
cccgccatgtactgtgaactctactccttttttggagacagcttggccgtcaggttcagt
acagggcccgggttcggcagctaccccccctacaccccgacccagcccagtgatgcacgg
aaggaaccacctggccccgcctccaaacccgataccgccagaaagatgccgcagctaacc
gccaacctcaacatcagcccgaggcaggatgggagtcctcgcaccgatcctccgccgccc
agcctggcagctactggatcaggacggtctctggctcgctcgtcctcctcctcctcttcc
tcgtctgtgcagcgctccagatcatcctcgtcacgttcgggtcagcgctctgcaggtctg
tcccgcgacgtcttccccaaagctcgcttcacctcacctcaggcgggacctccggcattc
accttcctcatcggcgggcggcaaatgggtcgccgttgtcaaggccgacgccccttccag
accacttttgccccgactccacctctttctgccatcccaccacgtgcctacgcccacaaa
ctccccgtcattggcagggtgggcaaacctgtacgccgctgggcgtgttcccattactcc
cttcatctgccgctctag
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