Larimichthys crocea (large yellow croaker): 104936553
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Entry
104936553 CDS
T04659
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104936553
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104936553
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
104936553
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C2: calpain family
104936553
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
104936553
NCBI-ProteinID:
XP_027130520
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Position
XXIV:3624951..3635311
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AA seq
713 aa
AA seq
DB search
MPYAPAGFFCDRLIRERERRDGEGSLNKPLRFNGQDYNVLKQEYHKKKTLFEDESFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEAYSGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKQLYNIMKKAVARG
SLMGCSIDSLVPARFETRTTTGLVKGHAYSVTAVEECKASQQKETKVRLVRLRNPWGQVE
WNGSWSDNSKEWATLAKGEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KLHKWTVSVNEGRWVRGCSAGGCRNYPETFWTNPQYRLRLLEEDDDAEENEAGCTFVVAL
MQKNRRKERKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLTNTSKARCKSYINLRELS
QRFRLAAGEYVIVPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEES
EEDQHFRTIFQEIAGDEMEITANELKNVLNRVISKHKDLNTEGFSLECCRSMIALMDMDG
TGRLNLQEFRHLWNKIKQWQGIFKHYNADQYGSINSYEMRNAVNDAGFRLNNQLYDIITM
RYANESMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgcaccggctggctttttctgtgaccggttgatccgggaacgagagaggaga
gacggggaagggtccctgaacaagcccctccgcttcaacggccaggactacaacgtcctg
aaacaggagtaccacaagaagaagaccctgttcgaggatgagtccttcccggccaccgtg
gagtctctgggcttcaaggagctcggacacaagtccaacaaagtcaagaacatcgtgtgg
aagaggcccaaggagatctgtgagaaccctcagttcattgttggaggagccagcaggaca
gatatctgccagggagatctcggtgactgctggttgttggctgccatcgcctgtctcacc
ttgaacgagaagcttctgtaccgtgtcgtcccccaggagcaaagcttctcagaggcctac
agcggcatcttccacttccagttctggcgttatggcgactgggtcgacgtcgtcattgac
gaccgcatcccgaccttcaacaaccagctggtcttcaccaagtccgctgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagctgcacggctcctacgaggccctc
aagggtggaaacaccaccgaggccatggaggacttcaccgggggagtcacggagttctac
gagatgaaggaggctcccaaacagctctacaacatcatgaagaaagctgtggctcggggc
tccctcatgggatgctccattgattctctggttcccgctcgcttcgagactcgtaccacg
acaggactggtgaagggtcacgcctactctgtgacggccgtggaggagtgcaaagcatct
cagcaaaaggagaccaaagtccgtctggtgcgtctcaggaacccgtggggtcaggtggaa
tggaacgggtcctggagtgacaactcgaaggagtgggccacacttgctaagggtgaaaaa
gagaagctgcagcaccagagtgccgaggacggagagttctggatgtcattcgaggacttc
aagaagaactacaccaagatcgagatctgtaacctcacccccgacgccctggaggacgac
aagctccacaagtggacggtttccgtgaacgaaggtcgctgggtcagaggctgctcggcc
ggaggctgcaggaactatccagagactttctggaccaaccctcagtaccgcctgcgtctg
ctggaggaggacgacgacgccgaggagaacgaagccggttgcaccttcgtcgtcgctctg
atgcagaagaacaggcggaaagagcgcaagctgggagccaacctcttcaccatcgggttc
gccatttatgaggtgcccaaggagatgcacgggaacaagcagcacctgcagaaggacttc
ttcctgaccaacacctccaaggctcgctgcaagtcctacatcaacctgcgcgagctgagc
cagcgtttccgcctcgccgccggggagtacgtcatcgtcccctccacgtacgagccgcac
caggagggagagttcatcctgagagtcttctctgagaagaagaacacctcagaggagatt
gagaacaggatcgaggccgatcatccagtgccggcaccagcctcggcaggagaggagagc
gaggaggaccagcacttcaggactatttttcaggagatagccggcgatgaaatggaaatc
acagccaacgaactgaagaacgttctcaacagagtgatctccaaacataaggacctgaac
actgaaggcttcagcctggagtgctgcaggagcatgattgctctgatggacatggacggc
acgggtcgactcaaccttcaggagttcagacatctgtggaataagatcaaacagtggcag
ggaatcttcaagcactacaacgccgaccagtacggcagcatcaacagttacgagatgagg
aacgccgtcaatgatgcaggcttccgtctcaacaaccagctgtacgacatcatcaccatg
cgctacgccaacgagagcatgaacatcgacttcgacagcttcatcagctgtctggttcga
ctggaggccatgttcagggcgttccaggccttcgatcaggatggagacggtacaatcaga
ctcagtgtcctggagtggctccagttgaccatgtacgcctga
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