Larimichthys crocea (large yellow croaker): 104936563
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Entry
104936563 CDS
T04659
Symbol
dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104936563 (dcaf10)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104936563 (dcaf10)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_VPS8
NBCH_WD40
WD40_like
Beta-prop_TEP1_C
RMC1_N
Beta-prop_DCAF12
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104936563
NCBI-ProteinID:
XP_027130589
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Position
XXIV:3708906..3714863
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AA seq
520 aa
AA seq
DB search
MSSEHQSDSEDADESQDRPDSGSVSDVEDDIAPVASPPPPTTAESGSEERPERSSTSPAS
DEREPCCHPPAAVPQAGSGGDSSTDSRRGTSLFSWLQSRTIRRGVFVDPARDNFRTMTSL
YCSMNPAVESVNLSTQTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPISSRHIKTLTEAH
EDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNIEYDTNTRLLVT
SGFDGNVITWDTNRFTEDGCPHKKFFHTRYLMRMRLTPDCSKMLISTSSGYLLILHDLDL
TQSLEVGSYRMLRARRTPLSSDGGTSASRSAGTPRQGNDSSKIHPHREGLSPRNSLEVLT
PEIPGERDRGNCITSLQLHPKGWATLIRCSSNMDDQEWTCVYEFQEGAPTRPLVSPRCSL
RLTHYIEEANVGRGYIKELCFSPDGRLICSPYGYGVRLLAFDESCGELADCLPVQTSCLR
EIRSIYSHSDVVLTTKFSPTHCQLASGCLSGRVALYQPKF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgagcaccagagcgacagcgaggacgccgacgagtcgcaggacaggcccgac
agcggcagcgtgtcggacgtggaggatgacatcgctccggtggcttctcctcctccaccg
acgacggcggagagcggcagcgaggagcggccggagcggagctccacgtctccggcgtcg
gacgagcgagagccgtgctgccacccgccggccgccgtgccgcaggcggggagcggcggg
gactccagcaccgacagccgccgggggaccagcctgttttcgtggctgcagagcaggaca
ataagacgaggggtgttcgtggacccggctcgggacaacttcaggacaatgaccagtttg
tactgctccatgaacccggctgtggagtctgtgaacctgagcacgcagacccacggagcc
gtgttcaacctggagtactccccggacgggtctgtactgactgtggcctgcgagcagact
gaggtcctgttgttcgatcccatctcgtccagacacatcaaaacgctcacagaagcccac
gaggactgcgtcaacaacataaggtttttggacaatcgtttgtttgccacctgctctgac
gacaccaccatcgcgttatgggatctccgtaagctgaactcgaaggtctgctcgctgcac
ggccacgccagctgggtgaagaacatcgagtacgacaccaacactcgtctcctcgtcacg
tccggcttcgacggcaacgtcatcacatgggacactaacaggttcaccgaggacggctgc
ccgcacaaaaagttcttccacacccgatacttgatgcggatgcgtctgacgcccgactgt
tccaagatgctcatctccacttcctcagggtacctgctcatcctccacgacctggacctc
acccagtcccttgaggtgggcagctaccgcatgctgcgagcgcgacggacgccgctcagc
tcagatggaggcacgtcggcgtccaggtcagctggaactcctcgccagggtaacgactcc
agcaagatccaccctcacagagaaggtctttctcccagaaacagcctggaggttttgact
ccggagatccccggagagagagaccgagggaactgcatcacctccctgcagctccaccct
aaaggctgggccacgctcatccgatgctccagtaacatggacgaccaggagtggacctgc
gtctatgagttccaggagggagcacccactcgcccgctggtctccccccgctgctccctc
cgcctcacccactacatcgaggaggccaacgtcggccggggctacatcaaagagctgtgc
ttcagcccggacggacgcctcatctgctccccgtacggctacggcgtccgcctgctggcg
ttcgacgagagctgcggcgagctggccgactgcctccccgtccagacgagctgcctcagg
gagatccgctccatctactcgcacagcgacgtggtgctcaccaccaagttctctccgacg
cactgccagctggcctcgggctgcctcagcggacgcgtcgccctttaccagcccaagttt
tag
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