Larimichthys crocea (large yellow croaker): 104936577
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Entry
104936577 CDS
T04659
Name
(RefSeq) TATA box-binding protein-like protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104936577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104936577
03021 Transcription machinery [BR:
lco03021
]
104936577
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
104936577
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104936577
RNA polymerase III system
TFIIIB
104936577
RNA polymerase I system
SL1/TIF-1B
104936577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
104936577
NCBI-ProteinID:
XP_027130866
LinkDB
All DBs
Position
XXIV:5544653..5548126
Genome browser
AA seq
303 aa
AA seq
DB search
MDESALERYFDDSIANDSSFPLGEGLGLQSPAHTPHDPTLSQQDQSSREPGDELDLSFLP
DELSTQEEPSRQHNTAESQATALDVSQDSGICLDYSSQDSTPAVSVDPQQSSSMLGLGTG
ASPFCPMTLMTPMTPMTPVTERSGIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKR
FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQ
NMVASCDVCFPIRLEGLVLTHQQFSSYEPELFPASSYRMVEASDSSAHISCLREKWVLTG
DEQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcagcgttggagcgttactttgatgactccattgcaaatgactccagcttc
cctttgggggaggggcttgggctccagagccctgcccacaccccacatgaccccaccctc
tctcaacaggaccagtccagcagagaaccgggggacgagctcgacctcagcttcctgcct
gatgagctcagcacacaggaagagcccagtcgccaacacaacacagctgagagtcaggcc
acagctctggacgtgtctcaggacagtggcatctgtctggactacagctcccaggattcc
acaccagcagtatcagttgacccccagcaaagttcatccatgttggggctgggaacaggt
gcttcccccttctgtcccatgaccctcatgacccccatgacccccatgacccccgtgact
gagagatcaggaatcatcccacagttacagaatattgtgtccacggtgaacctcggctgt
cctctggatctgaagtttatcgctctccaagccagaaatgctgagtacaacccaaagcgt
tttgcagcggtcatcatgagaatccgtgagccaagaaccacggcactgatcttcagctca
gggaagatggtctgtactggagccaagagtgaggagcagtcacggctggctgcgaggaag
tatgctcgggtggtgcagaagcttggcttccccgcccgcttcttggactttaagatccag
aacatggtggcgagctgcgacgtctgcttccccatcagactggaaggactggtcctgaca
caccaacagttcagcagttatgaacccgagctgtttccggcctcatcttaccgcatggtt
gaagcctcggactcgtctgctcatatttcgtgtctgagagaaaagtgggttctgaccggt
gatgaacaatga
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